RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 COA5Q86WW8 74 aa10.34□□□□□ -0.75
ACTN4-208ENST00000497637 MT1HP80294 61 aa10.33□□□□□ -0.76
ACTN4-208ENST00000497637 ACYP2P14621 99 aa10.32□□□□□ -0.76
ACTN4-208ENST00000497637 LORP23490 312 aaPredicted RBP10.32□□□□□ -0.76
ACTN4-208ENST00000497637 KRTAP10-6P60371 365 aaPredicted RBP10.27□□□□□ -0.77
ACTN4-208ENST00000497637 A8MUN3 132 aa10.24□□□□□ -0.77
ACTN4-208ENST00000497637 C4orf26Q17RF5 130 aa10.23□□□□□ -0.77
ACTN4-208ENST00000497637 KRTAP19-2Q3LHN2 52 aa10.22□□□□□ -0.77
ACTN4-208ENST00000497637 COX6B2Q6YFQ2 88 aa10.16□□□□□ -0.78
ACTN4-208ENST00000497637 KRTAP3-1Q9BYR8 98 aa10.15□□□□□ -0.78
ACTN4-208ENST00000497637 M0R2T5 61 aa10.14□□□□□ -0.79
ACTN4-208ENST00000497637 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
ACTN4-208ENST00000497637 Q1T7F1 81 aa10.13□□□□□ -0.79
ACTN4-208ENST00000497637 MPLKIPQ8TAP9 179 aa10.1□□□□□ -0.79
ACTN4-208ENST00000497637 V9GYY9 64 aa10.09□□□□□ -0.79
ACTN4-208ENST00000497637 SSPOA2VEC9 5147 aa10.03□□□□□ -0.8
ACTN4-208ENST00000497637 USH2AO75445 5202 aa10.01□□□□□ -0.81
ACTN4-208ENST00000497637 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
ACTN4-208ENST00000497637 FCGBPQ9Y6R7 5405 aaPredicted RBP9.98□□□□□ -0.81
ACTN4-208ENST00000497637 SPTSSBQ8NFR3 76 aa9.94□□□□□ -0.82
ACTN4-208ENST00000497637 RBM12B-AS1Q9P1G2 102 aa9.91□□□□□ -0.82
ACTN4-208ENST00000497637 SYNE2Q8WXH0 6885 aaKnown RBP9.9□□□□□ -0.82
ACTN4-208ENST00000497637 PSPHP1O15172 72 aa9.88□□□□□ -0.83
ACTN4-208ENST00000497637 H1FX-AS1Q4G0G2 97 aa9.88□□□□□ -0.83
ACTN4-208ENST00000497637 PRR15LQ9BU68 103 aa9.88□□□□□ -0.83
ACTN4-208ENST00000497637 FLGP20930 4061 aaPredicted RBP9.87□□□□□ -0.83
ACTN4-208ENST00000497637 MACF1Q9UPN3 7388 aaKnown RBP9.84□□□□□ -0.83
ACTN4-208ENST00000497637 Q5VV11 94 aa9.83□□□□□ -0.84
ACTN4-208ENST00000497637 S4R3F8 94 aa9.8□□□□□ -0.84
ACTN4-208ENST00000497637 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
ACTN4-208ENST00000497637 LCA10Q71F78 164 aa9.76□□□□□ -0.85
ACTN4-208ENST00000497637 A0A1B0GU69 56 aa9.75□□□□□ -0.85
ACTN4-208ENST00000497637 KRTAP19-1Q8IUB9 90 aa9.72□□□□□ -0.85
ACTN4-208ENST00000497637 SEC61GP60059 68 aa9.68□□□□□ -0.86
ACTN4-208ENST00000497637 KRTAP9-8Q9BYQ0 159 aa9.64□□□□□ -0.87
ACTN4-208ENST00000497637 A6NED7 52 aa9.59□□□□□ -0.87
ACTN4-208ENST00000497637 CSAG1Q6PB30 78 aa9.59□□□□□ -0.87
ACTN4-208ENST00000497637 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
ACTN4-208ENST00000497637 KRTAP6-3Q3LI67 103 aa9.52□□□□□ -0.89
ACTN4-208ENST00000497637 LCE2BO14633 110 aa9.49□□□□□ -0.89
ACTN4-208ENST00000497637 UQCR11O14957 56 aa9.49□□□□□ -0.89
ACTN4-208ENST00000497637 KRTAP3-2Q9BYR7 98 aa9.48□□□□□ -0.89
ACTN4-208ENST00000497637 CDC42SE1Q9NRR8 79 aa9.47□□□□□ -0.89
ACTN4-208ENST00000497637 PRO0628Q9UI54 55 aa9.45□□□□□ -0.9
ACTN4-208ENST00000497637 A0A1B0GU33 70 aa9.44□□□□□ -0.9
ACTN4-208ENST00000497637 SPATA8Q6RVD6 105 aa9.44□□□□□ -0.9
ACTN4-208ENST00000497637 NEBP20929 6669 aa9.42□□□□□ -0.9
ACTN4-208ENST00000497637 H0YAA0 97 aa9.41□□□□□ -0.9
ACTN4-208ENST00000497637 MIR22HGQ0VDD5 57 aa9.4□□□□□ -0.9
ACTN4-208ENST00000497637 MT2AP02795 61 aa9.39□□□□□ -0.91
ACTN4-208ENST00000497637 A8MU10 97 aa9.38□□□□□ -0.91
ACTN4-208ENST00000497637 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
ACTN4-208ENST00000497637 KRTAP9-3Q9BYQ3 159 aa9.37□□□□□ -0.91
ACTN4-208ENST00000497637 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
ACTN4-208ENST00000497637 P0C880 135 aa9.34□□□□□ -0.91
ACTN4-208ENST00000497637 MT1FP04733 61 aa9.31□□□□□ -0.92
ACTN4-208ENST00000497637 KRTAP10-10P60014 251 aa9.31□□□□□ -0.92
ACTN4-208ENST00000497637 KRTAP20-1Q3LI63 56 aa9.23□□□□□ -0.93
ACTN4-208ENST00000497637 KRTAP13-4Q3LI77 160 aa9.19□□□□□ -0.94
ACTN4-208ENST00000497637 M0QZ58 72 aa9.16□□□□□ -0.94
ACTN4-208ENST00000497637 MUC12Q9UKN1 5478 aa9.12□□□□□ -0.95
ACTN4-208ENST00000497637 PMAIP1Q13794 54 aa9.06□□□□□ -0.96
ACTN4-208ENST00000497637 SVIPQ8NHG7 77 aa9.04□□□□□ -0.96
ACTN4-208ENST00000497637 A6NN06 94 aa9.03□□□□□ -0.96
ACTN4-208ENST00000497637 A0A0D9SG42 100 aa9.01□□□□□ -0.97
ACTN4-208ENST00000497637 R4GN34 69 aa9.01□□□□□ -0.97
ACTN4-208ENST00000497637 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
ACTN4-208ENST00000497637 K7ERS5 55 aa8.95□□□□□ -0.98
ACTN4-208ENST00000497637 KRTAP12-1P59990 96 aa8.87□□□□□ -0.99
ACTN4-208ENST00000497637 KRTAP12-2P59991 146 aa8.82□□□□□ -1
ACTN4-208ENST00000497637 LINC01554Q52M75 96 aa8.82□□□□□ -1
ACTN4-208ENST00000497637 MDN1Q9NU22 5596 aa8.79□□□□□ -1
ACTN4-208ENST00000497637 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
ACTN4-208ENST00000497637 KRTAP2-3P0C7H8 128 aa8.77□□□□□ -1.01
ACTN4-208ENST00000497637 KRTAP2-4Q9BYR9 128 aa8.77□□□□□ -1.01
ACTN4-208ENST00000497637 KMT2DO14686 5537 aa8.76□□□□□ -1.01
ACTN4-208ENST00000497637 KTN1-AS1Q86SY8 53 aa8.72□□□□□ -1.01
ACTN4-208ENST00000497637 SPRR2GQ9BYE4 73 aa8.72□□□□□ -1.01
ACTN4-208ENST00000497637 KRTAP5-9P26371 169 aa8.7□□□□□ -1.02
ACTN4-208ENST00000497637 ROMO1P60602 79 aa8.62□□□□□ -1.03
ACTN4-208ENST00000497637 KRTAP19-8Q3LI54 63 aa8.51□□□□□ -1.05
ACTN4-208ENST00000497637 PRAC1Q96KF2 57 aa8.48□□□□□ -1.05
ACTN4-208ENST00000497637 CAMK2N1Q7Z7J9 78 aa8.46□□□□□ -1.06
ACTN4-208ENST00000497637 PLAC4Q8WY50 150 aa8.46□□□□□ -1.06
ACTN4-208ENST00000497637 KRTAP2-2Q9BYT5 123 aa8.44□□□□□ -1.06
ACTN4-208ENST00000497637 KRTAP2-1Q9BYU5 128 aa8.44□□□□□ -1.06
ACTN4-208ENST00000497637 GPR98Q8WXG9 6306 aa8.4□□□□□ -1.06
ACTN4-208ENST00000497637 C10orf95Q9H7T3 257 aa8.39□□□□□ -1.07
ACTN4-208ENST00000497637 MT1BP07438 61 aa8.35□□□□□ -1.07
ACTN4-208ENST00000497637 KRTAP10-5P60370 271 aa8.34□□□□□ -1.07
ACTN4-208ENST00000497637 SPRR2EP22531 72 aa8.31□□□□□ -1.08
ACTN4-208ENST00000497637 SPRR2BP35325 72 aa8.31□□□□□ -1.08
ACTN4-208ENST00000497637 SPRR2AP35326 72 aa8.31□□□□□ -1.08
ACTN4-208ENST00000497637 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
ACTN4-208ENST00000497637 SPRR2FQ96RM1 72 aa8.22□□□□□ -1.09
ACTN4-208ENST00000497637 TNP1P09430 55 aa8.1□□□□□ -1.11
ACTN4-208ENST00000497637 MT1XP80297 61 aa8.1□□□□□ -1.11
ACTN4-208ENST00000497637 LCE1AQ5T7P2 110 aa8.07□□□□□ -1.12
ACTN4-208ENST00000497637 SPRR2DP22532 72 aa8.05□□□□□ -1.12
ACTN4-208ENST00000497637 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms