RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 KRTAP3-1Q9BYR8 98 aa9.83□□□□□ -0.84
CTSD-206ENST00000497544 C20orf197Q8N268 126 aa9.74□□□□□ -0.85
CTSD-206ENST00000497544 SNURFQ9Y675 71 aa9.74□□□□□ -0.85
CTSD-206ENST00000497544 KRTAP19-1Q8IUB9 90 aa9.72□□□□□ -0.85
CTSD-206ENST00000497544 COX7CP15954 63 aa9.71□□□□□ -0.86
CTSD-206ENST00000497544 A8MUN3 132 aa9.7□□□□□ -0.86
CTSD-206ENST00000497544 S4R3F8 94 aa9.7□□□□□ -0.86
CTSD-206ENST00000497544 ANAPC13Q9BS18 74 aa9.67□□□□□ -0.86
CTSD-206ENST00000497544 LCA10Q71F78 164 aa9.62□□□□□ -0.87
CTSD-206ENST00000497544 CSAG1Q6PB30 78 aa9.59□□□□□ -0.87
CTSD-206ENST00000497544 DMAC1Q96GE9 116 aa9.59□□□□□ -0.87
CTSD-206ENST00000497544 KRTAP9-8Q9BYQ0 159 aa9.56□□□□□ -0.88
CTSD-206ENST00000497544 NDUFC1O43677 76 aa9.53□□□□□ -0.88
CTSD-206ENST00000497544 ACYP2P14621 99 aa9.53□□□□□ -0.88
CTSD-206ENST00000497544 KRTAP6-3Q3LI67 103 aa9.52□□□□□ -0.89
CTSD-206ENST00000497544 SPANXA2-OT1Q8N9U9 137 aa9.52□□□□□ -0.89
CTSD-206ENST00000497544 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
CTSD-206ENST00000497544 MT2AP02795 61 aa9.48□□□□□ -0.89
CTSD-206ENST00000497544 NEBP20929 6669 aa9.46□□□□□ -0.89
CTSD-206ENST00000497544 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
CTSD-206ENST00000497544 LCE2BO14633 110 aa9.43□□□□□ -0.9
CTSD-206ENST00000497544 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
CTSD-206ENST00000497544 CYSTM1Q9H1C7 97 aa9.42□□□□□ -0.9
CTSD-206ENST00000497544 H7BZZ5 65 aa9.41□□□□□ -0.9
CTSD-206ENST00000497544 MT1FP04733 61 aa9.4□□□□□ -0.9
CTSD-206ENST00000497544 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
CTSD-206ENST00000497544 KRTAP20-1Q3LI63 56 aa9.35□□□□□ -0.91
CTSD-206ENST00000497544 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
CTSD-206ENST00000497544 KRTAP19-6Q3LI70 58 aa9.26□□□□□ -0.93
CTSD-206ENST00000497544 H0YAA0 97 aa9.24□□□□□ -0.93
CTSD-206ENST00000497544 KRTAP9-3Q9BYQ3 159 aa9.24□□□□□ -0.93
CTSD-206ENST00000497544 COA5Q86WW8 74 aa9.23□□□□□ -0.93
CTSD-206ENST00000497544 MUC12Q9UKN1 5478 aa9.22□□□□□ -0.93
CTSD-206ENST00000497544 ADM2Q7Z4H4 148 aa9.2□□□□□ -0.94
CTSD-206ENST00000497544 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
CTSD-206ENST00000497544 TMEM258P61165 79 aa9.1□□□□□ -0.95
CTSD-206ENST00000497544 CRIPTQ9P021 101 aa9.09□□□□□ -0.95
CTSD-206ENST00000497544 P0C880 135 aa9.04□□□□□ -0.96
CTSD-206ENST00000497544 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
CTSD-206ENST00000497544 PCP4P48539 62 aa9.01□□□□□ -0.97
CTSD-206ENST00000497544 SPRR2GQ9BYE4 73 aa9□□□□□ -0.97
CTSD-206ENST00000497544 R4GN34 69 aa8.94□□□□□ -0.98
CTSD-206ENST00000497544 SEC61GP60059 68 aa8.93□□□□□ -0.98
CTSD-206ENST00000497544 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.98
CTSD-206ENST00000497544 M0QZ58 72 aa8.88□□□□□ -0.99
CTSD-206ENST00000497544 KRTAP19-8Q3LI54 63 aa8.85□□□□□ -0.99
CTSD-206ENST00000497544 Q5VV11 94 aa8.85□□□□□ -0.99
CTSD-206ENST00000497544 MDN1Q9NU22 5596 aa8.79□□□□□ -1
CTSD-206ENST00000497544 KRTAP2-3P0C7H8 128 aa8.79□□□□□ -1
CTSD-206ENST00000497544 KRTAP2-4Q9BYR9 128 aa8.79□□□□□ -1
CTSD-206ENST00000497544 A0A1B0GU69 56 aa8.78□□□□□ -1
CTSD-206ENST00000497544 KMT2DO14686 5537 aa8.78□□□□□ -1
CTSD-206ENST00000497544 MT1BP07438 61 aa8.77□□□□□ -1.01
CTSD-206ENST00000497544 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
CTSD-206ENST00000497544 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
CTSD-206ENST00000497544 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
CTSD-206ENST00000497544 A0A1B0GU33 70 aa8.68□□□□□ -1.02
CTSD-206ENST00000497544 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
CTSD-206ENST00000497544 KRTAP5-9P26371 169 aa8.64□□□□□ -1.03
CTSD-206ENST00000497544 KRTAP13-4Q3LI77 160 aa8.63□□□□□ -1.03
CTSD-206ENST00000497544 SPATA8Q6RVD6 105 aa8.57□□□□□ -1.04
CTSD-206ENST00000497544 RPS28P62857 69 aaKnown RBP8.55□□□□□ -1.04
CTSD-206ENST00000497544 V9GYY9 64 aa8.55□□□□□ -1.04
CTSD-206ENST00000497544 SMIM26A0A096LP01 95 aa8.53□□□□□ -1.04
CTSD-206ENST00000497544 A6NN06 94 aa8.53□□□□□ -1.04
CTSD-206ENST00000497544 GPR98Q8WXG9 6306 aa8.51□□□□□ -1.05
CTSD-206ENST00000497544 A0A0D9SG42 100 aa8.49□□□□□ -1.05
CTSD-206ENST00000497544 KRTAP10-5P60370 271 aa8.48□□□□□ -1.05
CTSD-206ENST00000497544 Q1T7F1 81 aa8.48□□□□□ -1.05
CTSD-206ENST00000497544 KRTAP2-2Q9BYT5 123 aa8.44□□□□□ -1.06
CTSD-206ENST00000497544 KRTAP2-1Q9BYU5 128 aa8.44□□□□□ -1.06
CTSD-206ENST00000497544 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
CTSD-206ENST00000497544 UQCR11O14957 56 aa8.4□□□□□ -1.06
CTSD-206ENST00000497544 PSPHP1O15172 72 aa8.4□□□□□ -1.06
CTSD-206ENST00000497544 SPINT4Q6UDR6 99 aa8.36□□□□□ -1.07
CTSD-206ENST00000497544 MT1XP80297 61 aa8.35□□□□□ -1.07
CTSD-206ENST00000497544 A8MU10 97 aa8.34□□□□□ -1.07
CTSD-206ENST00000497544 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
CTSD-206ENST00000497544 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
CTSD-206ENST00000497544 SPRR2EP22531 72 aa8.26□□□□□ -1.09
CTSD-206ENST00000497544 SPRR2BP35325 72 aa8.26□□□□□ -1.09
CTSD-206ENST00000497544 SPRR2AP35326 72 aa8.26□□□□□ -1.09
CTSD-206ENST00000497544 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
CTSD-206ENST00000497544 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
CTSD-206ENST00000497544 A6NED7 52 aa8.16□□□□□ -1.1
CTSD-206ENST00000497544 SPRR2FQ96RM1 72 aa8.12□□□□□ -1.11
CTSD-206ENST00000497544 K7ERS5 55 aa8.04□□□□□ -1.12
CTSD-206ENST00000497544 LCE1AQ5T7P2 110 aa8.02□□□□□ -1.13
CTSD-206ENST00000497544 SPRR2DP22532 72 aa8□□□□□ -1.13
CTSD-206ENST00000497544 KRTAP10-7P60409 375 aaPredicted RBP8□□□□□ -1.13
CTSD-206ENST00000497544 KRTAP10-12P60413 245 aa7.94□□□□□ -1.14
CTSD-206ENST00000497544 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
CTSD-206ENST00000497544 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
CTSD-206ENST00000497544 LCE3BQ5TA77 95 aa7.88□□□□□ -1.15
CTSD-206ENST00000497544 KRTAP4-8A0A0G2JLE6 195 aa7.85□□□□□ -1.15
CTSD-206ENST00000497544 KRTAP4-8Q9BYQ9 185 aa7.85□□□□□ -1.15
CTSD-206ENST00000497544 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
CTSD-206ENST00000497544 TNP1P09430 55 aa7.81□□□□□ -1.16
CTSD-206ENST00000497544 DSTQ03001 7570 aaKnown RBP7.71□□□□□ -1.18
CTSD-206ENST00000497544 KRTAP4-9Q9BYQ8 210 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms