RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 V9GYY9 64 aa6.13□□□□□ -1.43
HPS1-213ENST00000497527 S4R3F8 94 aa6.11□□□□□ -1.43
HPS1-213ENST00000497527 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
HPS1-213ENST00000497527 Q1T7F1 81 aa6.06□□□□□ -1.44
HPS1-213ENST00000497527 LCA10Q71F78 164 aa6.04□□□□□ -1.44
HPS1-213ENST00000497527 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
HPS1-213ENST00000497527 CSAG1Q6PB30 78 aa6□□□□□ -1.45
HPS1-213ENST00000497527 PRR15LQ9BU68 103 aa6□□□□□ -1.45
HPS1-213ENST00000497527 SEC61GP60059 68 aa5.99□□□□□ -1.45
HPS1-213ENST00000497527 KRTAP19-2Q3LHN2 52 aa5.99□□□□□ -1.45
HPS1-213ENST00000497527 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
HPS1-213ENST00000497527 A0A1B0GU69 56 aa5.96□□□□□ -1.46
HPS1-213ENST00000497527 MUC2Q02817 5179 aa5.92□□□□□ -1.46
HPS1-213ENST00000497527 PSPHP1O15172 72 aa5.9□□□□□ -1.46
HPS1-213ENST00000497527 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
HPS1-213ENST00000497527 H0YAA0 97 aa5.86□□□□□ -1.47
HPS1-213ENST00000497527 Q5VV11 94 aa5.86□□□□□ -1.47
HPS1-213ENST00000497527 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
HPS1-213ENST00000497527 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
HPS1-213ENST00000497527 M0R2T5 61 aa5.79□□□□□ -1.48
HPS1-213ENST00000497527 MT1HP80294 61 aa5.79□□□□□ -1.48
HPS1-213ENST00000497527 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
HPS1-213ENST00000497527 A6NED7 52 aa5.78□□□□□ -1.48
HPS1-213ENST00000497527 UQCR11O14957 56 aa5.78□□□□□ -1.48
HPS1-213ENST00000497527 A0A1B0GU33 70 aa5.77□□□□□ -1.49
HPS1-213ENST00000497527 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
HPS1-213ENST00000497527 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
HPS1-213ENST00000497527 P0C880 135 aa5.71□□□□□ -1.5
HPS1-213ENST00000497527 M0QZ58 72 aa5.69□□□□□ -1.5
HPS1-213ENST00000497527 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
HPS1-213ENST00000497527 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
HPS1-213ENST00000497527 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
HPS1-213ENST00000497527 SPATA8Q6RVD6 105 aa5.67□□□□□ -1.5
HPS1-213ENST00000497527 CRIPTQ9P021 101 aa5.67□□□□□ -1.5
HPS1-213ENST00000497527 R4GN34 69 aa5.64□□□□□ -1.51
HPS1-213ENST00000497527 LCE2AQ5TA79 106 aaPredicted RBP5.59□□□□□ -1.51
HPS1-213ENST00000497527 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
HPS1-213ENST00000497527 MT2AP02795 61 aa5.55□□□□□ -1.52
HPS1-213ENST00000497527 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
HPS1-213ENST00000497527 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
HPS1-213ENST00000497527 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
HPS1-213ENST00000497527 K7ERS5 55 aa5.54□□□□□ -1.52
HPS1-213ENST00000497527 KRTAP10-10P60014 251 aa5.54□□□□□ -1.52
HPS1-213ENST00000497527 A8MU10 97 aa5.51□□□□□ -1.53
HPS1-213ENST00000497527 A0A0D9SG42 100 aa5.5□□□□□ -1.53
HPS1-213ENST00000497527 MT1FP04733 61 aa5.5□□□□□ -1.53
HPS1-213ENST00000497527 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
HPS1-213ENST00000497527 A6NN06 94 aa5.46□□□□□ -1.54
HPS1-213ENST00000497527 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
HPS1-213ENST00000497527 KRTAP9-2Q9BYQ4 174 aa5.42□□□□□ -1.54
HPS1-213ENST00000497527 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
HPS1-213ENST00000497527 KRTAP12-1P59990 96 aa5.4□□□□□ -1.54
HPS1-213ENST00000497527 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
HPS1-213ENST00000497527 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
HPS1-213ENST00000497527 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
HPS1-213ENST00000497527 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
HPS1-213ENST00000497527 PLAC4Q8WY50 150 aa5.34□□□□□ -1.55
HPS1-213ENST00000497527 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
HPS1-213ENST00000497527 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
HPS1-213ENST00000497527 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
HPS1-213ENST00000497527 ROMO1P60602 79 aa5.22□□□□□ -1.57
HPS1-213ENST00000497527 MT1BP07438 61 aa5.21□□□□□ -1.58
HPS1-213ENST00000497527 LCE2BO14633 110 aa5.19□□□□□ -1.58
HPS1-213ENST00000497527 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
HPS1-213ENST00000497527 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
HPS1-213ENST00000497527 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
HPS1-213ENST00000497527 USH2AO75445 5202 aa5.11□□□□□ -1.59
HPS1-213ENST00000497527 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
HPS1-213ENST00000497527 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
HPS1-213ENST00000497527 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
HPS1-213ENST00000497527 TNP1P09430 55 aa5.04□□□□□ -1.6
HPS1-213ENST00000497527 MT1XP80297 61 aa5.03□□□□□ -1.6
HPS1-213ENST00000497527 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
HPS1-213ENST00000497527 SSPOA2VEC9 5147 aa5□□□□□ -1.61
HPS1-213ENST00000497527 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
HPS1-213ENST00000497527 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
HPS1-213ENST00000497527 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
HPS1-213ENST00000497527 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
HPS1-213ENST00000497527 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
HPS1-213ENST00000497527 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
HPS1-213ENST00000497527 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
HPS1-213ENST00000497527 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
HPS1-213ENST00000497527 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
HPS1-213ENST00000497527 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
HPS1-213ENST00000497527 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
HPS1-213ENST00000497527 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
HPS1-213ENST00000497527 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
HPS1-213ENST00000497527 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
HPS1-213ENST00000497527 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
HPS1-213ENST00000497527 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
HPS1-213ENST00000497527 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
HPS1-213ENST00000497527 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
HPS1-213ENST00000497527 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
HPS1-213ENST00000497527 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
HPS1-213ENST00000497527 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
HPS1-213ENST00000497527 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
HPS1-213ENST00000497527 MT1EP04732 61 aa4.43□□□□□ -1.7
HPS1-213ENST00000497527 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
HPS1-213ENST00000497527 KMT2DO14686 5537 aa4.39□□□□□ -1.71
HPS1-213ENST00000497527 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms