RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 TMEM254Q8TBM7 123 aa2.91□□□□□ -1.94
GGPS1-208ENST00000497327 TRAV7A0A075B6U4 112 aa2.9□□□□□ -1.95
GGPS1-208ENST00000497327 SMIM20Q8N5G0 67 aa2.9□□□□□ -1.95
GGPS1-208ENST00000497327 SERP2Q8N6R1 65 aa2.9□□□□□ -1.95
GGPS1-208ENST00000497327 MRPL34Q9BQ48 92 aaKnown RBP2.9□□□□□ -1.95
GGPS1-208ENST00000497327 ANAPC13Q9BS18 74 aa2.9□□□□□ -1.95
GGPS1-208ENST00000497327 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
GGPS1-208ENST00000497327 COX7CP15954 63 aa2.89□□□□□ -1.95
GGPS1-208ENST00000497327 CCDC179H3BU77 68 aa2.87□□□□□ -1.95
GGPS1-208ENST00000497327 UQCRQO14949 82 aa2.87□□□□□ -1.95
GGPS1-208ENST00000497327 C20orf166-AS1Q96NR2 134 aa2.87□□□□□ -1.95
GGPS1-208ENST00000497327 TP53AIP1Q9HCN2 124 aa2.87□□□□□ -1.95
GGPS1-208ENST00000497327 A8MUU9 505 aa2.86□□□□□ -1.95
GGPS1-208ENST00000497327 Q5W150 140 aa2.86□□□□□ -1.95
GGPS1-208ENST00000497327 ZCCHC13Q8WW36 166 aaKnown RBP2.86□□□□□ -1.95
GGPS1-208ENST00000497327 A0A0U1RQV1 116 aa2.85□□□□□ -1.95
GGPS1-208ENST00000497327 C9orf92A6NGG3 77 aa2.85□□□□□ -1.95
GGPS1-208ENST00000497327 PRR4Q16378 134 aa2.85□□□□□ -1.95
GGPS1-208ENST00000497327 C5orf47Q569G3 176 aa2.85□□□□□ -1.95
GGPS1-208ENST00000497327 UBR4Q5T4S7 5183 aa2.85□□□□□ -1.95
GGPS1-208ENST00000497327 KLKP1Q107X0 134 aa2.84□□□□□ -1.95
GGPS1-208ENST00000497327 TPRXLQ17RH7 258 aa2.84□□□□□ -1.95
GGPS1-208ENST00000497327 CYSTM1Q9H1C7 97 aa2.84□□□□□ -1.95
GGPS1-208ENST00000497327 TRAV22A0A0B4J277 110 aa2.83□□□□□ -1.96
GGPS1-208ENST00000497327 H3BPC8 53 aa2.83□□□□□ -1.96
GGPS1-208ENST00000497327 NDUFS5O43920 106 aa2.83□□□□□ -1.96
GGPS1-208ENST00000497327 C20orf197Q8N268 126 aa2.83□□□□□ -1.96
GGPS1-208ENST00000497327 H0Y9P7 68 aa2.82□□□□□ -1.96
GGPS1-208ENST00000497327 MP68P56378 58 aa2.82□□□□□ -1.96
GGPS1-208ENST00000497327 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
GGPS1-208ENST00000497327 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
GGPS1-208ENST00000497327 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
GGPS1-208ENST00000497327 SNURFQ9Y675 71 aa2.81□□□□□ -1.96
GGPS1-208ENST00000497327 H7BZZ5 65 aa2.8□□□□□ -1.96
GGPS1-208ENST00000497327 C1orf64Q8NEQ6 169 aa2.8□□□□□ -1.96
GGPS1-208ENST00000497327 LINC00208Q96KT6 92 aa2.8□□□□□ -1.96
GGPS1-208ENST00000497327 HERC1Q15751 4861 aa2.8□□□□□ -1.96
GGPS1-208ENST00000497327 LOC101927531A0A1B0GV80 90 aa2.79□□□□□ -1.96
GGPS1-208ENST00000497327 CYP4F30PQ9H0H9 118 aa2.79□□□□□ -1.96
GGPS1-208ENST00000497327 LRP2P98164 4655 aa2.78□□□□□ -1.96
GGPS1-208ENST00000497327 NDUFC1O43677 76 aa2.78□□□□□ -1.96
GGPS1-208ENST00000497327 ATP11AUNQ6ZP68 121 aa2.77□□□□□ -1.97
GGPS1-208ENST00000497327 LPAP08519 4548 aa2.76□□□□□ -1.97
GGPS1-208ENST00000497327 SPINK7P58062 85 aa2.75□□□□□ -1.97
GGPS1-208ENST00000497327 TMEM258P61165 79 aa2.75□□□□□ -1.97
GGPS1-208ENST00000497327 PCOTHQ58A44 107 aa2.75□□□□□ -1.97
GGPS1-208ENST00000497327 V9GYY9 64 aa2.75□□□□□ -1.97
GGPS1-208ENST00000497327 HRES1P13985 223 aa2.74□□□□□ -1.97
GGPS1-208ENST00000497327 C7orf65Q6ZTY9 151 aa2.74□□□□□ -1.97
GGPS1-208ENST00000497327 SPANXA2-OT1Q8N9U9 137 aa2.74□□□□□ -1.97
GGPS1-208ENST00000497327 MUC17Q685J3 4493 aa2.73□□□□□ -1.97
GGPS1-208ENST00000497327 FAM236DA0A1B0GTK5 79 aa2.72□□□□□ -1.97
GGPS1-208ENST00000497327 FAM236CP0DP71 79 aa2.72□□□□□ -1.97
GGPS1-208ENST00000497327 KRTAP4-1Q9BYQ7 146 aa2.72□□□□□ -1.97
GGPS1-208ENST00000497327 ATP5EP56381 51 aaPredicted RBP2.71□□□□□ -1.98
GGPS1-208ENST00000497327 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
GGPS1-208ENST00000497327 C4orf26Q17RF5 130 aa2.69□□□□□ -1.98
GGPS1-208ENST00000497327 COX6B2Q6YFQ2 88 aa2.69□□□□□ -1.98
GGPS1-208ENST00000497327 DMAC1Q96GE9 116 aa2.69□□□□□ -1.98
GGPS1-208ENST00000497327 RPS28P62857 69 aaKnown RBP2.67□□□□□ -1.98
GGPS1-208ENST00000497327 KRTAP19-2Q3LHN2 52 aa2.67□□□□□ -1.98
GGPS1-208ENST00000497327 SERP1Q9Y6X1 66 aa2.67□□□□□ -1.98
GGPS1-208ENST00000497327 RNF213Q63HN8 5207 aa2.67□□□□□ -1.98
GGPS1-208ENST00000497327 A8MUN3 132 aa2.66□□□□□ -1.98
GGPS1-208ENST00000497327 ACYP2P14621 99 aa2.65□□□□□ -1.99
GGPS1-208ENST00000497327 CAMK2N1Q7Z7J9 78 aa2.65□□□□□ -1.99
GGPS1-208ENST00000497327 COA5Q86WW8 74 aa2.64□□□□□ -1.99
GGPS1-208ENST00000497327 H1FX-AS1Q4G0G2 97 aa2.62□□□□□ -1.99
GGPS1-208ENST00000497327 RBM12B-AS1Q9P1G2 102 aa2.62□□□□□ -1.99
GGPS1-208ENST00000497327 SMIM26A0A096LP01 95 aa2.61□□□□□ -1.99
GGPS1-208ENST00000497327 MUC2Q02817 5179 aa2.61□□□□□ -1.99
GGPS1-208ENST00000497327 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
GGPS1-208ENST00000497327 CHKB-CPT1BH3BT56 60 aa2.58□□□□□ -2
GGPS1-208ENST00000497327 LCA10Q71F78 164 aa2.58□□□□□ -2
GGPS1-208ENST00000497327 S4R3F8 94 aa2.57□□□□□ -2
GGPS1-208ENST00000497327 FAT4Q6V0I7 4981 aa2.56□□□□□ -2
GGPS1-208ENST00000497327 PSPHP1O15172 72 aa2.56□□□□□ -2
GGPS1-208ENST00000497327 Q1T7F1 81 aa2.56□□□□□ -2
GGPS1-208ENST00000497327 LINC01558Q9Y6Z2 57 aa2.55□□□□□ -2
GGPS1-208ENST00000497327 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
GGPS1-208ENST00000497327 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2
GGPS1-208ENST00000497327 MT1HP80294 61 aa2.52□□□□□ -2.01
GGPS1-208ENST00000497327 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
GGPS1-208ENST00000497327 CSAG1Q6PB30 78 aa2.52□□□□□ -2.01
GGPS1-208ENST00000497327 PRO0628Q9UI54 55 aa2.51□□□□□ -2.01
GGPS1-208ENST00000497327 H0YAA0 97 aa2.5□□□□□ -2.01
GGPS1-208ENST00000497327 Q5VV11 94 aa2.5□□□□□ -2.01
GGPS1-208ENST00000497327 PRR15LQ9BU68 103 aa2.49□□□□□ -2.01
GGPS1-208ENST00000497327 A0A1B0GU69 56 aa2.48□□□□□ -2.01
GGPS1-208ENST00000497327 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
GGPS1-208ENST00000497327 P0C880 135 aa2.46□□□□□ -2.02
GGPS1-208ENST00000497327 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
GGPS1-208ENST00000497327 A0A1B0GU33 70 aa2.44□□□□□ -2.02
GGPS1-208ENST00000497327 M0R2T5 61 aa2.42□□□□□ -2.02
GGPS1-208ENST00000497327 MT2AP02795 61 aa2.42□□□□□ -2.02
GGPS1-208ENST00000497327 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
GGPS1-208ENST00000497327 UQCR11O14957 56 aa2.41□□□□□ -2.02
GGPS1-208ENST00000497327 MT1FP04733 61 aa2.41□□□□□ -2.02
GGPS1-208ENST00000497327 SPATA8Q6RVD6 105 aa2.41□□□□□ -2.02
GGPS1-208ENST00000497327 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms