RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
GGPS1-208ENST00000497327 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
GGPS1-208ENST00000497327 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
GGPS1-208ENST00000497327 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
GGPS1-208ENST00000497327 FOXD1Q16676 465 aa22.77■■□□□ 1.24
GGPS1-208ENST00000497327 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
GGPS1-208ENST00000497327 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
GGPS1-208ENST00000497327 ADRA2BP18089 450 aa21.39■■□□□ 1.01
GGPS1-208ENST00000497327 PIAS4Q8N2W9 510 aaPredicted RBP21.27■■□□□ 1
GGPS1-208ENST00000497327 MSH5O43196 834 aa21.16■□□□□ 0.98
GGPS1-208ENST00000497327 POTEDQ86YR6 584 aa20.35■□□□□ 0.85
GGPS1-208ENST00000497327 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
GGPS1-208ENST00000497327 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
GGPS1-208ENST00000497327 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
GGPS1-208ENST00000497327 PPP4R3CPQ6ZMV5 832 aa19.33■□□□□ 0.68
GGPS1-208ENST00000497327 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
GGPS1-208ENST00000497327 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
GGPS1-208ENST00000497327 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
GGPS1-208ENST00000497327 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
GGPS1-208ENST00000497327 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
GGPS1-208ENST00000497327 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
GGPS1-208ENST00000497327 KCNA4P22459 653 aa18.24■□□□□ 0.51
GGPS1-208ENST00000497327 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
GGPS1-208ENST00000497327 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
GGPS1-208ENST00000497327 CACNB1Q02641 598 aaPredicted RBP18.01■□□□□ 0.47
GGPS1-208ENST00000497327 C1QBPQ07021 282 aaKnown RBP17.83■□□□□ 0.44
GGPS1-208ENST00000497327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.44
GGPS1-208ENST00000497327 U3KPZ7 1027 aaPredicted RBP17.57■□□□□ 0.4
GGPS1-208ENST00000497327 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
GGPS1-208ENST00000497327 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
GGPS1-208ENST00000497327 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
GGPS1-208ENST00000497327 CAPN15O75808 1086 aa17.13■□□□□ 0.33
GGPS1-208ENST00000497327 DSG3P32926 999 aa17.05■□□□□ 0.32
GGPS1-208ENST00000497327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
GGPS1-208ENST00000497327 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
GGPS1-208ENST00000497327 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
GGPS1-208ENST00000497327 APLP2Q06481 763 aa16.97■□□□□ 0.31
GGPS1-208ENST00000497327 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
GGPS1-208ENST00000497327 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
GGPS1-208ENST00000497327 TRHP20396 242 aaPredicted RBP16.91■□□□□ 0.3
GGPS1-208ENST00000497327 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
GGPS1-208ENST00000497327 ZBTB22O15209 634 aa16.82■□□□□ 0.28
GGPS1-208ENST00000497327 ABCB7O75027 752 aa16.78■□□□□ 0.28
GGPS1-208ENST00000497327 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
GGPS1-208ENST00000497327 POLA2Q14181 598 aa16.52■□□□□ 0.24
GGPS1-208ENST00000497327 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
GGPS1-208ENST00000497327 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
GGPS1-208ENST00000497327 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
GGPS1-208ENST00000497327 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
GGPS1-208ENST00000497327 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
GGPS1-208ENST00000497327 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
GGPS1-208ENST00000497327 POTEHQ6S545 545 aa15.96■□□□□ 0.15
GGPS1-208ENST00000497327 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
GGPS1-208ENST00000497327 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
GGPS1-208ENST00000497327 FBLN2P98095 1184 aa15.85■□□□□ 0.13
GGPS1-208ENST00000497327 CHRDL2Q6WN34 429 aa15.78■□□□□ 0.12
GGPS1-208ENST00000497327 REM2Q8IYK8 340 aaPredicted RBP15.76■□□□□ 0.11
GGPS1-208ENST00000497327 SPDYE2BA6NHP3 402 aa15.72■□□□□ 0.11
GGPS1-208ENST00000497327 SPDYE6P0CI01 402 aa15.72■□□□□ 0.11
GGPS1-208ENST00000497327 SPDYE2Q495Y8 402 aa15.72■□□□□ 0.11
GGPS1-208ENST00000497327 PITPNM1O00562 1244 aa15.6■□□□□ 0.09
GGPS1-208ENST00000497327 SSUH2Q9Y2M2 353 aa15.59■□□□□ 0.09
GGPS1-208ENST00000497327 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
GGPS1-208ENST00000497327 PIP4P2Q8N4L2 257 aa15.48■□□□□ 0.07
GGPS1-208ENST00000497327 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
GGPS1-208ENST00000497327 SPDYE1Q8NFV5 336 aaPredicted RBP15.37■□□□□ 0.05
GGPS1-208ENST00000497327 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
GGPS1-208ENST00000497327 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
GGPS1-208ENST00000497327 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
GGPS1-208ENST00000497327 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
GGPS1-208ENST00000497327 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
GGPS1-208ENST00000497327 HAX1O00165 279 aa15.08■□□□□ 0
GGPS1-208ENST00000497327 CHADLQ6NUI6 762 aa15.06■□□□□ 0
GGPS1-208ENST00000497327 SP7Q8TDD2 431 aaPredicted RBP15.06■□□□□ 0
GGPS1-208ENST00000497327 EVX2Q03828 476 aa15.01□□□□□ -0.01
GGPS1-208ENST00000497327 C19orf67A6NJJ6 358 aa14.93□□□□□ -0.02
GGPS1-208ENST00000497327 PROM2Q8N271 834 aa14.92□□□□□ -0.02
GGPS1-208ENST00000497327 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
GGPS1-208ENST00000497327 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
GGPS1-208ENST00000497327 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
GGPS1-208ENST00000497327 CD44P16070 742 aaKnown RBP14.7□□□□□ -0.06
GGPS1-208ENST00000497327 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
GGPS1-208ENST00000497327 GABBR2O75899 941 aa14.64□□□□□ -0.07
GGPS1-208ENST00000497327 FKBP8Q14318 412 aa14.63□□□□□ -0.07
GGPS1-208ENST00000497327 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
GGPS1-208ENST00000497327 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
GGPS1-208ENST00000497327 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
GGPS1-208ENST00000497327 CLCN6P51797 869 aa14.42□□□□□ -0.1
GGPS1-208ENST00000497327 MIER1Q8N108 512 aa14.4□□□□□ -0.1
GGPS1-208ENST00000497327 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
GGPS1-208ENST00000497327 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
GGPS1-208ENST00000497327 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
GGPS1-208ENST00000497327 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
GGPS1-208ENST00000497327 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
GGPS1-208ENST00000497327 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
GGPS1-208ENST00000497327 TSPYL2Q9H2G4 693 aaPredicted RBP14.27□□□□□ -0.13
GGPS1-208ENST00000497327 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
GGPS1-208ENST00000497327 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
GGPS1-208ENST00000497327 DCBLD2Q96PD2 775 aa14.22□□□□□ -0.13
GGPS1-208ENST00000497327 FBXO3Q9UK99 471 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms