RNA–Protein interactions for RNA: ENST00000496742.5

SSR2-213, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3 BASIC

Gene SSR2, Length 825 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-213ENST00000496742 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
SSR2-213ENST00000496742 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
SSR2-213ENST00000496742 Q5VV11 94 aa4.96□□□□□ -1.62
SSR2-213ENST00000496742 A0A1B0GU69 56 aa4.93□□□□□ -1.62
SSR2-213ENST00000496742 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
SSR2-213ENST00000496742 SEC61GP60059 68 aa4.91□□□□□ -1.62
SSR2-213ENST00000496742 BRK1Q8WUW1 75 aa4.9□□□□□ -1.63
SSR2-213ENST00000496742 H1FX-AS1Q4G0G2 97 aa4.89□□□□□ -1.63
SSR2-213ENST00000496742 S4R3F8 94 aa4.89□□□□□ -1.63
SSR2-213ENST00000496742 A6NED7 52 aa4.88□□□□□ -1.63
SSR2-213ENST00000496742 LCA10Q71F78 164 aa4.84□□□□□ -1.63
SSR2-213ENST00000496742 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
SSR2-213ENST00000496742 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
SSR2-213ENST00000496742 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
SSR2-213ENST00000496742 UQCR11O14957 56 aa4.79□□□□□ -1.64
SSR2-213ENST00000496742 LPAP08519 4548 aa4.79□□□□□ -1.64
SSR2-213ENST00000496742 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
SSR2-213ENST00000496742 MUC2Q02817 5179 aa4.75□□□□□ -1.65
SSR2-213ENST00000496742 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
SSR2-213ENST00000496742 A0A1B0GU33 70 aa4.74□□□□□ -1.65
SSR2-213ENST00000496742 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
SSR2-213ENST00000496742 A8MU10 97 aa4.72□□□□□ -1.65
SSR2-213ENST00000496742 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
SSR2-213ENST00000496742 FAT4Q6V0I7 4981 aa4.68□□□□□ -1.66
SSR2-213ENST00000496742 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
SSR2-213ENST00000496742 ADM2Q7Z4H4 148 aa4.67□□□□□ -1.66
SSR2-213ENST00000496742 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
SSR2-213ENST00000496742 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
SSR2-213ENST00000496742 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
SSR2-213ENST00000496742 H0YAA0 97 aa4.65□□□□□ -1.67
SSR2-213ENST00000496742 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
SSR2-213ENST00000496742 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
SSR2-213ENST00000496742 P0C880 135 aa4.63□□□□□ -1.67
SSR2-213ENST00000496742 LCE2BO14633 110 aa4.61□□□□□ -1.67
SSR2-213ENST00000496742 A6NN06 94 aa4.57□□□□□ -1.68
SSR2-213ENST00000496742 K7ERS5 55 aa4.56□□□□□ -1.68
SSR2-213ENST00000496742 M0QZ58 72 aa4.56□□□□□ -1.68
SSR2-213ENST00000496742 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
SSR2-213ENST00000496742 A0A0D9SG42 100 aa4.53□□□□□ -1.68
SSR2-213ENST00000496742 LCE2CQ5TA81 110 aa4.53□□□□□ -1.68
SSR2-213ENST00000496742 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
SSR2-213ENST00000496742 R4GN34 69 aa4.51□□□□□ -1.69
SSR2-213ENST00000496742 M0R2T5 61 aa4.48□□□□□ -1.69
SSR2-213ENST00000496742 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
SSR2-213ENST00000496742 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
SSR2-213ENST00000496742 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.7
SSR2-213ENST00000496742 MT1HP80294 61 aa4.45□□□□□ -1.7
SSR2-213ENST00000496742 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
SSR2-213ENST00000496742 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
SSR2-213ENST00000496742 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
SSR2-213ENST00000496742 CRIPTQ9P021 101 aa4.43□□□□□ -1.7
SSR2-213ENST00000496742 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
SSR2-213ENST00000496742 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
SSR2-213ENST00000496742 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
SSR2-213ENST00000496742 ROMO1P60602 79 aa4.35□□□□□ -1.71
SSR2-213ENST00000496742 MT2AP02795 61 aa4.31□□□□□ -1.72
SSR2-213ENST00000496742 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
SSR2-213ENST00000496742 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
SSR2-213ENST00000496742 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
SSR2-213ENST00000496742 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
SSR2-213ENST00000496742 MT1FP04733 61 aa4.27□□□□□ -1.73
SSR2-213ENST00000496742 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
SSR2-213ENST00000496742 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
SSR2-213ENST00000496742 KRTAP19-1Q8IUB9 90 aa4.23□□□□□ -1.73
SSR2-213ENST00000496742 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
SSR2-213ENST00000496742 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
SSR2-213ENST00000496742 CRCT1Q9UGL9 99 aa4.19□□□□□ -1.74
SSR2-213ENST00000496742 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
SSR2-213ENST00000496742 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
SSR2-213ENST00000496742 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
SSR2-213ENST00000496742 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
SSR2-213ENST00000496742 USH2AO75445 5202 aa4.08□□□□□ -1.76
SSR2-213ENST00000496742 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
SSR2-213ENST00000496742 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
SSR2-213ENST00000496742 MT1BP07438 61 aa4.07□□□□□ -1.76
SSR2-213ENST00000496742 TNP1P09430 55 aa4.06□□□□□ -1.76
SSR2-213ENST00000496742 PP632Q6XCG6 107 aa4□□□□□ -1.77
SSR2-213ENST00000496742 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
SSR2-213ENST00000496742 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
SSR2-213ENST00000496742 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
SSR2-213ENST00000496742 MT1XP80297 61 aa3.96□□□□□ -1.78
SSR2-213ENST00000496742 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
SSR2-213ENST00000496742 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
SSR2-213ENST00000496742 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
SSR2-213ENST00000496742 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
SSR2-213ENST00000496742 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
SSR2-213ENST00000496742 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
SSR2-213ENST00000496742 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
SSR2-213ENST00000496742 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
SSR2-213ENST00000496742 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
SSR2-213ENST00000496742 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
SSR2-213ENST00000496742 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
SSR2-213ENST00000496742 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
SSR2-213ENST00000496742 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
SSR2-213ENST00000496742 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
SSR2-213ENST00000496742 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
SSR2-213ENST00000496742 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
SSR2-213ENST00000496742 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
SSR2-213ENST00000496742 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
SSR2-213ENST00000496742 NEBP20929 6669 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms