RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 KRTAP9-8Q9BYQ0 159 aa8.74□□□□□ -1.01
TSSC4-210ENST00000496468 CYSTM1Q9H1C7 97 aa8.74□□□□□ -1.01
TSSC4-210ENST00000496468 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
TSSC4-210ENST00000496468 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
TSSC4-210ENST00000496468 ACYP2P14621 99 aa8.72□□□□□ -1.01
TSSC4-210ENST00000496468 H7BZZ5 65 aa8.71□□□□□ -1.02
TSSC4-210ENST00000496468 MT2AP02795 61 aa8.7□□□□□ -1.02
TSSC4-210ENST00000496468 MT1FP04733 61 aa8.64□□□□□ -1.03
TSSC4-210ENST00000496468 CHKB-CPT1BH3BT56 60 aa8.62□□□□□ -1.03
TSSC4-210ENST00000496468 KRTAP10-10P60014 251 aa8.62□□□□□ -1.03
TSSC4-210ENST00000496468 SPTSSBQ8NFR3 76 aa8.55□□□□□ -1.04
TSSC4-210ENST00000496468 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
TSSC4-210ENST00000496468 COA5Q86WW8 74 aa8.53□□□□□ -1.04
TSSC4-210ENST00000496468 H0YAA0 97 aa8.51□□□□□ -1.05
TSSC4-210ENST00000496468 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
TSSC4-210ENST00000496468 KRTAP9-2Q9BYQ4 174 aa8.5□□□□□ -1.05
TSSC4-210ENST00000496468 TMEM258P61165 79 aa8.46□□□□□ -1.06
TSSC4-210ENST00000496468 KRTAP9-3Q9BYQ3 159 aa8.45□□□□□ -1.06
TSSC4-210ENST00000496468 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
TSSC4-210ENST00000496468 PCP4P48539 62 aa8.34□□□□□ -1.07
TSSC4-210ENST00000496468 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
TSSC4-210ENST00000496468 LCE2BO14633 110 aa8.3□□□□□ -1.08
TSSC4-210ENST00000496468 P0C880 135 aa8.3□□□□□ -1.08
TSSC4-210ENST00000496468 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
TSSC4-210ENST00000496468 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
TSSC4-210ENST00000496468 USH2AO75445 5202 aa8.26□□□□□ -1.09
TSSC4-210ENST00000496468 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
TSSC4-210ENST00000496468 R4GN34 69 aa8.2□□□□□ -1.1
TSSC4-210ENST00000496468 SEC61GP60059 68 aa8.19□□□□□ -1.1
TSSC4-210ENST00000496468 SERP1Q9Y6X1 66 aa8.18□□□□□ -1.1
TSSC4-210ENST00000496468 M0QZ58 72 aa8.16□□□□□ -1.1
TSSC4-210ENST00000496468 FSIP2Q5CZC0 6907 aa8.15□□□□□ -1.11
TSSC4-210ENST00000496468 KRTAP19-8Q3LI54 63 aa8.12□□□□□ -1.11
TSSC4-210ENST00000496468 Q5VV11 94 aa8.12□□□□□ -1.11
TSSC4-210ENST00000496468 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
TSSC4-210ENST00000496468 A0A1B0GU69 56 aa8.08□□□□□ -1.12
TSSC4-210ENST00000496468 SSPOA2VEC9 5147 aa8.08□□□□□ -1.12
TSSC4-210ENST00000496468 KRTAP9-6A0A140TA67 174 aa8.05□□□□□ -1.12
TSSC4-210ENST00000496468 MT1BP07438 61 aa8.05□□□□□ -1.12
TSSC4-210ENST00000496468 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
TSSC4-210ENST00000496468 PRR15LQ9BU68 103 aa8.01□□□□□ -1.13
TSSC4-210ENST00000496468 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
TSSC4-210ENST00000496468 A0A1B0GU33 70 aa7.97□□□□□ -1.13
TSSC4-210ENST00000496468 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
TSSC4-210ENST00000496468 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
TSSC4-210ENST00000496468 PLAC4Q8WY50 150 aa7.9□□□□□ -1.14
TSSC4-210ENST00000496468 V9GYY9 64 aa7.89□□□□□ -1.15
TSSC4-210ENST00000496468 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
TSSC4-210ENST00000496468 RPS28P62857 69 aaKnown RBP7.87□□□□□ -1.15
TSSC4-210ENST00000496468 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
TSSC4-210ENST00000496468 A6NN06 94 aa7.84□□□□□ -1.15
TSSC4-210ENST00000496468 Q1T7F1 81 aa7.83□□□□□ -1.16
TSSC4-210ENST00000496468 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
TSSC4-210ENST00000496468 A0A0D9SG42 100 aa7.8□□□□□ -1.16
TSSC4-210ENST00000496468 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
TSSC4-210ENST00000496468 PSPHP1O15172 72 aa7.75□□□□□ -1.17
TSSC4-210ENST00000496468 UQCR11O14957 56 aa7.73□□□□□ -1.17
TSSC4-210ENST00000496468 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.18
TSSC4-210ENST00000496468 A8MU10 97 aa7.69□□□□□ -1.18
TSSC4-210ENST00000496468 MT1XP80297 61 aa7.68□□□□□ -1.18
TSSC4-210ENST00000496468 SPINT4Q6UDR6 99 aa7.66□□□□□ -1.18
TSSC4-210ENST00000496468 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
TSSC4-210ENST00000496468 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
TSSC4-210ENST00000496468 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
TSSC4-210ENST00000496468 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
TSSC4-210ENST00000496468 A6NED7 52 aa7.54□□□□□ -1.2
TSSC4-210ENST00000496468 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
TSSC4-210ENST00000496468 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
TSSC4-210ENST00000496468 K7ERS5 55 aa7.39□□□□□ -1.23
TSSC4-210ENST00000496468 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
TSSC4-210ENST00000496468 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
TSSC4-210ENST00000496468 KRTAP9-7A8MTY7 169 aa7.29□□□□□ -1.24
TSSC4-210ENST00000496468 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
TSSC4-210ENST00000496468 KMT2DO14686 5537 aa7.27□□□□□ -1.25
TSSC4-210ENST00000496468 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
TSSC4-210ENST00000496468 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
TSSC4-210ENST00000496468 KRTAP6-3Q3LI67 103 aa7.19□□□□□ -1.26
TSSC4-210ENST00000496468 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
TSSC4-210ENST00000496468 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
TSSC4-210ENST00000496468 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
TSSC4-210ENST00000496468 TNP1P09430 55 aa7.15□□□□□ -1.26
TSSC4-210ENST00000496468 KRTAP5-9P26371 169 aa7.09□□□□□ -1.27
TSSC4-210ENST00000496468 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
TSSC4-210ENST00000496468 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
TSSC4-210ENST00000496468 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
TSSC4-210ENST00000496468 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
TSSC4-210ENST00000496468 ROMO1P60602 79 aa6.96□□□□□ -1.3
TSSC4-210ENST00000496468 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
TSSC4-210ENST00000496468 MDN1Q9NU22 5596 aa6.89□□□□□ -1.31
TSSC4-210ENST00000496468 KRTAP19-7Q3SYF9 63 aa6.85□□□□□ -1.31
TSSC4-210ENST00000496468 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
TSSC4-210ENST00000496468 SPRR2EP22531 72 aa6.81□□□□□ -1.32
TSSC4-210ENST00000496468 SPRR2BP35325 72 aa6.81□□□□□ -1.32
TSSC4-210ENST00000496468 SPRR2AP35326 72 aa6.81□□□□□ -1.32
TSSC4-210ENST00000496468 NEBP20929 6669 aa6.78□□□□□ -1.32
TSSC4-210ENST00000496468 MT1EP04732 61 aa6.78□□□□□ -1.32
TSSC4-210ENST00000496468 LCE1AQ5T7P2 110 aa6.75□□□□□ -1.33
TSSC4-210ENST00000496468 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
TSSC4-210ENST00000496468 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
TSSC4-210ENST00000496468 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms