RNA–Protein interactions for RNA: ENST00000496424.2

LRMDA-208, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2 BASIC

Gene LRMDA, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-208ENST00000496424 KRTAP21-3Q3LHN1 58 aa3.43□□□□□ -1.86
LRMDA-208ENST00000496424 M0QZ58 72 aa3.42□□□□□ -1.86
LRMDA-208ENST00000496424 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
LRMDA-208ENST00000496424 HECTD4Q9Y4D8 3996 aa3.42□□□□□ -1.86
LRMDA-208ENST00000496424 HYDINQ4G0P3 5121 aa3.42□□□□□ -1.86
LRMDA-208ENST00000496424 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
LRMDA-208ENST00000496424 PKD1P98161 4303 aa3.4□□□□□ -1.86
LRMDA-208ENST00000496424 KRTAP1-5Q9BYS1 174 aa3.4□□□□□ -1.86
LRMDA-208ENST00000496424 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
LRMDA-208ENST00000496424 SACSQ9NZJ4 4579 aa3.39□□□□□ -1.87
LRMDA-208ENST00000496424 DNAH11Q96DT5 4516 aa3.38□□□□□ -1.87
LRMDA-208ENST00000496424 C9orf92A6NGG3 77 aa3.37□□□□□ -1.87
LRMDA-208ENST00000496424 KRTAP3-1Q9BYR8 98 aa3.36□□□□□ -1.87
LRMDA-208ENST00000496424 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
LRMDA-208ENST00000496424 KMT2CQ8NEZ4 4911 aaKnown RBP3.35□□□□□ -1.87
LRMDA-208ENST00000496424 DNAH5Q8TE73 4624 aa3.31□□□□□ -1.88
LRMDA-208ENST00000496424 RYR3Q15413 4870 aa3.31□□□□□ -1.88
LRMDA-208ENST00000496424 LORP23490 312 aaPredicted RBP3.31□□□□□ -1.88
LRMDA-208ENST00000496424 DNAH8Q96JB1 4490 aa3.3□□□□□ -1.88
LRMDA-208ENST00000496424 RYR2Q92736 4967 aa3.3□□□□□ -1.88
LRMDA-208ENST00000496424 PKHD1P08F94 4074 aa3.29□□□□□ -1.88
LRMDA-208ENST00000496424 KRTAP10-2P60368 255 aa3.24□□□□□ -1.89
LRMDA-208ENST00000496424 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
LRMDA-208ENST00000496424 Q5VSD8 79 aa3.21□□□□□ -1.9
LRMDA-208ENST00000496424 PKHD1L1Q86WI1 4243 aa3.2□□□□□ -1.9
LRMDA-208ENST00000496424 DYNC1H1Q14204 4646 aaKnown RBP3.19□□□□□ -1.9
LRMDA-208ENST00000496424 VPS13BQ7Z7G8 4022 aa3.19□□□□□ -1.9
LRMDA-208ENST00000496424 SMR3BP02814 79 aaPredicted RBP3.19□□□□□ -1.9
LRMDA-208ENST00000496424 TNP1P09430 55 aa3.18□□□□□ -1.9
LRMDA-208ENST00000496424 KRTAP10-1P60331 282 aa3.18□□□□□ -1.9
LRMDA-208ENST00000496424 APOBP04114 4563 aaKnown RBP3.17□□□□□ -1.9
LRMDA-208ENST00000496424 LRP1BQ9NZR2 4599 aa3.15□□□□□ -1.9
LRMDA-208ENST00000496424 EPPK1P58107 5090 aaKnown RBP3.14□□□□□ -1.91
LRMDA-208ENST00000496424 RPS29P62273 56 aaKnown RBP3.12□□□□□ -1.91
LRMDA-208ENST00000496424 HSPG2P98160 4391 aa3.12□□□□□ -1.91
LRMDA-208ENST00000496424 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
LRMDA-208ENST00000496424 FAT3Q8TDW7 4589 aa3.11□□□□□ -1.91
LRMDA-208ENST00000496424 FAT1Q14517 4588 aa3.1□□□□□ -1.91
LRMDA-208ENST00000496424 TNXBP22105 4242 aa3.05□□□□□ -1.92
LRMDA-208ENST00000496424 KIAA1109Q2LD37 5005 aa3.04□□□□□ -1.92
LRMDA-208ENST00000496424 A0A1B0GVY2 172 aa3.04□□□□□ -1.92
LRMDA-208ENST00000496424 RYR1P21817 5038 aa3.04□□□□□ -1.92
LRMDA-208ENST00000496424 KRTAP1-4P0C5Y4 121 aa3.01□□□□□ -1.93
LRMDA-208ENST00000496424 LRP1Q07954 4544 aaKnown RBP2.99□□□□□ -1.93
LRMDA-208ENST00000496424 MYCBP2O75592 4640 aa2.99□□□□□ -1.93
LRMDA-208ENST00000496424 KRTAP17-1Q9BYP8 105 aa2.98□□□□□ -1.93
LRMDA-208ENST00000496424 HERC2O95714 4834 aa2.97□□□□□ -1.93
LRMDA-208ENST00000496424 ABCA13Q86UQ4 5058 aa2.96□□□□□ -1.94
LRMDA-208ENST00000496424 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
LRMDA-208ENST00000496424 KRTAP4-5Q9BYR2 181 aa2.93□□□□□ -1.94
LRMDA-208ENST00000496424 KRTAP10-4P60372 401 aaPredicted RBP2.93□□□□□ -1.94
LRMDA-208ENST00000496424 PCLOQ9Y6V0 5065 aa2.9□□□□□ -1.95
LRMDA-208ENST00000496424 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
LRMDA-208ENST00000496424 LPAP08519 4548 aa2.8□□□□□ -1.96
LRMDA-208ENST00000496424 KRTAP10-10P60014 251 aa2.8□□□□□ -1.96
LRMDA-208ENST00000496424 HERC1Q15751 4861 aa2.78□□□□□ -1.96
LRMDA-208ENST00000496424 LRP2P98164 4655 aa2.78□□□□□ -1.96
LRMDA-208ENST00000496424 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
LRMDA-208ENST00000496424 M0R2T5 61 aa2.74□□□□□ -1.97
LRMDA-208ENST00000496424 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
LRMDA-208ENST00000496424 MUC2Q02817 5179 aa2.72□□□□□ -1.97
LRMDA-208ENST00000496424 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
LRMDA-208ENST00000496424 RNF213Q63HN8 5207 aa2.67□□□□□ -1.98
LRMDA-208ENST00000496424 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
LRMDA-208ENST00000496424 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
LRMDA-208ENST00000496424 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
LRMDA-208ENST00000496424 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
LRMDA-208ENST00000496424 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
LRMDA-208ENST00000496424 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
LRMDA-208ENST00000496424 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
LRMDA-208ENST00000496424 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
LRMDA-208ENST00000496424 KRTAP19-2Q3LHN2 52 aa2.51□□□□□ -2.01
LRMDA-208ENST00000496424 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
LRMDA-208ENST00000496424 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
LRMDA-208ENST00000496424 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
LRMDA-208ENST00000496424 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
LRMDA-208ENST00000496424 LCE5AQ5TCM9 118 aa2.47□□□□□ -2.01
LRMDA-208ENST00000496424 LOC100996750A0A140TA64 210 aa2.45□□□□□ -2.02
LRMDA-208ENST00000496424 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
LRMDA-208ENST00000496424 KRTAP9-6A0A140TA67 174 aa2.43□□□□□ -2.02
LRMDA-208ENST00000496424 KRTAP9-7A8MTY7 169 aa2.43□□□□□ -2.02
LRMDA-208ENST00000496424 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
LRMDA-208ENST00000496424 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
LRMDA-208ENST00000496424 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
LRMDA-208ENST00000496424 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
LRMDA-208ENST00000496424 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
LRMDA-208ENST00000496424 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
LRMDA-208ENST00000496424 MT1HP80294 61 aa2.37□□□□□ -2.03
LRMDA-208ENST00000496424 FSIP2Q5CZC0 6907 aa2.37□□□□□ -2.03
LRMDA-208ENST00000496424 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
LRMDA-208ENST00000496424 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
LRMDA-208ENST00000496424 USH2AO75445 5202 aa2.31□□□□□ -2.04
LRMDA-208ENST00000496424 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.3□□□□□ -2.04
LRMDA-208ENST00000496424 MT1FP04733 61 aa2.3□□□□□ -2.04
LRMDA-208ENST00000496424 MT2AP02795 61 aa2.29□□□□□ -2.04
LRMDA-208ENST00000496424 KRTAP9-8Q9BYQ0 159 aa2.27□□□□□ -2.05
LRMDA-208ENST00000496424 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
LRMDA-208ENST00000496424 KRTAP9-2Q9BYQ4 174 aa2.27□□□□□ -2.05
LRMDA-208ENST00000496424 KRTAP4-8Q9BYQ9 185 aa2.27□□□□□ -2.05
LRMDA-208ENST00000496424 PRM1P04553 51 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms