RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 KRTAP9-6A0A140TA67 174 aa10.6□□□□□ -0.71
ECHDC3-205ENST00000496136 S4R3F8 94 aa10.6□□□□□ -0.71
ECHDC3-205ENST00000496136 LCA10Q71F78 164 aa10.57□□□□□ -0.72
ECHDC3-205ENST00000496136 ACYP2P14621 99 aa10.56□□□□□ -0.72
ECHDC3-205ENST00000496136 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
ECHDC3-205ENST00000496136 KRTAP10-6P60371 365 aaPredicted RBP10.44□□□□□ -0.74
ECHDC3-205ENST00000496136 CSAG1Q6PB30 78 aa10.44□□□□□ -0.74
ECHDC3-205ENST00000496136 LORP23490 312 aaPredicted RBP10.42□□□□□ -0.74
ECHDC3-205ENST00000496136 TMEM258P61165 79 aa10.38□□□□□ -0.75
ECHDC3-205ENST00000496136 CHKB-CPT1BH3BT56 60 aa10.35□□□□□ -0.75
ECHDC3-205ENST00000496136 ATP5EP56381 51 aaPredicted RBP10.34□□□□□ -0.75
ECHDC3-205ENST00000496136 COA5Q86WW8 74 aa10.34□□□□□ -0.75
ECHDC3-205ENST00000496136 KRTAP9-8Q9BYQ0 159 aa10.33□□□□□ -0.76
ECHDC3-205ENST00000496136 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
ECHDC3-205ENST00000496136 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
ECHDC3-205ENST00000496136 MT2AP02795 61 aa10.23□□□□□ -0.77
ECHDC3-205ENST00000496136 CRCT1Q9UGL9 99 aa10.2□□□□□ -0.78
ECHDC3-205ENST00000496136 MT1FP04733 61 aa10.16□□□□□ -0.78
ECHDC3-205ENST00000496136 FSIP2Q5CZC0 6907 aa10.15□□□□□ -0.78
ECHDC3-205ENST00000496136 H0YAA0 97 aa10.15□□□□□ -0.78
ECHDC3-205ENST00000496136 KRTAP10-10P60014 251 aa10.14□□□□□ -0.79
ECHDC3-205ENST00000496136 ADM2Q7Z4H4 148 aa10.09□□□□□ -0.79
ECHDC3-205ENST00000496136 SERP1Q9Y6X1 66 aa10.06□□□□□ -0.8
ECHDC3-205ENST00000496136 RPS28P62857 69 aaKnown RBP10.03□□□□□ -0.8
ECHDC3-205ENST00000496136 KRTAP3-2Q9BYR7 98 aa10.01□□□□□ -0.81
ECHDC3-205ENST00000496136 P0C880 135 aa9.98□□□□□ -0.81
ECHDC3-205ENST00000496136 KRTAP9-3Q9BYQ3 159 aa9.98□□□□□ -0.81
ECHDC3-205ENST00000496136 CRIPTQ9P021 101 aa9.87□□□□□ -0.83
ECHDC3-205ENST00000496136 SEC61GP60059 68 aa9.86□□□□□ -0.83
ECHDC3-205ENST00000496136 KRTAP19-1Q8IUB9 90 aa9.83□□□□□ -0.84
ECHDC3-205ENST00000496136 A0A1B0GU69 56 aa9.8□□□□□ -0.84
ECHDC3-205ENST00000496136 SPRR2GQ9BYE4 73 aa9.8□□□□□ -0.84
ECHDC3-205ENST00000496136 LINC01558Q9Y6Z2 57 aa9.8□□□□□ -0.84
ECHDC3-205ENST00000496136 LCE2BO14633 110 aa9.77□□□□□ -0.85
ECHDC3-205ENST00000496136 R4GN34 69 aa9.76□□□□□ -0.85
ECHDC3-205ENST00000496136 SMIM26A0A096LP01 95 aa9.74□□□□□ -0.85
ECHDC3-205ENST00000496136 M0QZ58 72 aa9.71□□□□□ -0.85
ECHDC3-205ENST00000496136 PRR15LQ9BU68 103 aa9.68□□□□□ -0.86
ECHDC3-205ENST00000496136 Q1T7F1 81 aa9.67□□□□□ -0.86
ECHDC3-205ENST00000496136 A0A1B0GU33 70 aa9.66□□□□□ -0.86
ECHDC3-205ENST00000496136 V9GYY9 64 aa9.65□□□□□ -0.86
ECHDC3-205ENST00000496136 KRTAP13-4Q3LI77 160 aa9.62□□□□□ -0.87
ECHDC3-205ENST00000496136 KRTAP19-8Q3LI54 63 aa9.61□□□□□ -0.87
ECHDC3-205ENST00000496136 USH2AO75445 5202 aa9.61□□□□□ -0.87
ECHDC3-205ENST00000496136 LINC01554Q52M75 96 aa9.55□□□□□ -0.88
ECHDC3-205ENST00000496136 PSPHP1O15172 72 aa9.54□□□□□ -0.88
ECHDC3-205ENST00000496136 Q5VV11 94 aa9.54□□□□□ -0.88
ECHDC3-205ENST00000496136 SPATA8Q6RVD6 105 aa9.54□□□□□ -0.88
ECHDC3-205ENST00000496136 MT1BP07438 61 aa9.52□□□□□ -0.88
ECHDC3-205ENST00000496136 KRTAP9-7A8MTY7 169 aa9.49□□□□□ -0.89
ECHDC3-205ENST00000496136 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.48□□□□□ -0.89
ECHDC3-205ENST00000496136 UQCR11O14957 56 aa9.42□□□□□ -0.9
ECHDC3-205ENST00000496136 A0A0D9SG42 100 aa9.39□□□□□ -0.91
ECHDC3-205ENST00000496136 SSPOA2VEC9 5147 aa9.37□□□□□ -0.91
ECHDC3-205ENST00000496136 A6NN06 94 aa9.36□□□□□ -0.91
ECHDC3-205ENST00000496136 PLAC4Q8WY50 150 aa9.36□□□□□ -0.91
ECHDC3-205ENST00000496136 A8MU10 97 aa9.32□□□□□ -0.92
ECHDC3-205ENST00000496136 KRTAP19-6Q3LI70 58 aa9.27□□□□□ -0.92
ECHDC3-205ENST00000496136 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.93
ECHDC3-205ENST00000496136 SVIPQ8NHG7 77 aa9.27□□□□□ -0.93
ECHDC3-205ENST00000496136 FCGBPQ9Y6R7 5405 aaPredicted RBP9.24□□□□□ -0.93
ECHDC3-205ENST00000496136 A6NED7 52 aa9.23□□□□□ -0.93
ECHDC3-205ENST00000496136 KRTAP12-1P59990 96 aa9.22□□□□□ -0.93
ECHDC3-205ENST00000496136 SPINT4Q6UDR6 99 aa9.2□□□□□ -0.94
ECHDC3-205ENST00000496136 KRTAP12-2P59991 146 aa9.17□□□□□ -0.94
ECHDC3-205ENST00000496136 KRTAP10-5P60370 271 aa9.13□□□□□ -0.95
ECHDC3-205ENST00000496136 PRO0628Q9UI54 55 aa9.13□□□□□ -0.95
ECHDC3-205ENST00000496136 MT1XP80297 61 aa9.11□□□□□ -0.95
ECHDC3-205ENST00000496136 BRK1Q8WUW1 75 aa9.11□□□□□ -0.95
ECHDC3-205ENST00000496136 CAMK2N1Q7Z7J9 78 aa9.08□□□□□ -0.96
ECHDC3-205ENST00000496136 PRO2289Q9P1D8 64 aa9.06□□□□□ -0.96
ECHDC3-205ENST00000496136 SYNE2Q8WXH0 6885 aaKnown RBP9.01□□□□□ -0.97
ECHDC3-205ENST00000496136 MACF1Q9UPN3 7388 aaKnown RBP9.01□□□□□ -0.97
ECHDC3-205ENST00000496136 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
ECHDC3-205ENST00000496136 K7ERS5 55 aa8.91□□□□□ -0.98
ECHDC3-205ENST00000496136 KRTAP6-3Q3LI67 103 aa8.77□□□□□ -1.01
ECHDC3-205ENST00000496136 C10orf95Q9H7T3 257 aa8.76□□□□□ -1.01
ECHDC3-205ENST00000496136 KRTAP10-7P60409 375 aaPredicted RBP8.72□□□□□ -1.01
ECHDC3-205ENST00000496136 KRTAP10-12P60413 245 aa8.65□□□□□ -1.02
ECHDC3-205ENST00000496136 PMAIP1Q13794 54 aa8.61□□□□□ -1.03
ECHDC3-205ENST00000496136 TNP1P09430 55 aa8.56□□□□□ -1.04
ECHDC3-205ENST00000496136 KMT2DO14686 5537 aa8.55□□□□□ -1.04
ECHDC3-205ENST00000496136 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
ECHDC3-205ENST00000496136 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
ECHDC3-205ENST00000496136 NEBP20929 6669 aa8.5□□□□□ -1.05
ECHDC3-205ENST00000496136 ROMO1P60602 79 aa8.48□□□□□ -1.05
ECHDC3-205ENST00000496136 KRTAP25-1Q3LHN0 102 aa8.43□□□□□ -1.06
ECHDC3-205ENST00000496136 KTN1-AS1Q86SY8 53 aa8.4□□□□□ -1.06
ECHDC3-205ENST00000496136 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
ECHDC3-205ENST00000496136 MUC12Q9UKN1 5478 aa8.36□□□□□ -1.07
ECHDC3-205ENST00000496136 KRTAP20-1Q3LI63 56 aa8.3□□□□□ -1.08
ECHDC3-205ENST00000496136 LCE3AQ5TA76 89 aa8.29□□□□□ -1.08
ECHDC3-205ENST00000496136 KRTAP5-9P26371 169 aa8.25□□□□□ -1.09
ECHDC3-205ENST00000496136 SPRR2FQ96RM1 72 aa8.19□□□□□ -1.1
ECHDC3-205ENST00000496136 KRTAP23-1A1A580 65 aa8.15□□□□□ -1.1
ECHDC3-205ENST00000496136 KRTAP19-7Q3SYF9 63 aa8.14□□□□□ -1.11
ECHDC3-205ENST00000496136 KRTAP19-5Q3LI72 72 aa8.12□□□□□ -1.11
ECHDC3-205ENST00000496136 MDN1Q9NU22 5596 aa8.1□□□□□ -1.11
ECHDC3-205ENST00000496136 PP632Q6XCG6 107 aa8.02□□□□□ -1.13
ECHDC3-205ENST00000496136 PRAC1Q96KF2 57 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms