RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 H3BPC8 53 aa6.42□□□□□ -1.38
SNX17-208ENST00000493711 IGKV2-30P06310 120 aa6.42□□□□□ -1.38
SNX17-208ENST00000493711 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
SNX17-208ENST00000493711 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
SNX17-208ENST00000493711 HRES1P13985 223 aa6.37□□□□□ -1.39
SNX17-208ENST00000493711 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
SNX17-208ENST00000493711 SERP2Q8N6R1 65 aa6.36□□□□□ -1.39
SNX17-208ENST00000493711 LINC00208Q96KT6 92 aa6.36□□□□□ -1.39
SNX17-208ENST00000493711 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
SNX17-208ENST00000493711 MPLKIPQ8TAP9 179 aa6.35□□□□□ -1.39
SNX17-208ENST00000493711 COX6B2Q6YFQ2 88 aa6.34□□□□□ -1.39
SNX17-208ENST00000493711 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
SNX17-208ENST00000493711 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
SNX17-208ENST00000493711 COX7CP15954 63 aa6.27□□□□□ -1.41
SNX17-208ENST00000493711 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
SNX17-208ENST00000493711 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
SNX17-208ENST00000493711 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
SNX17-208ENST00000493711 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
SNX17-208ENST00000493711 KLKP1Q107X0 134 aa6.22□□□□□ -1.41
SNX17-208ENST00000493711 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
SNX17-208ENST00000493711 A8MUN3 132 aa6.2□□□□□ -1.42
SNX17-208ENST00000493711 SNURFQ9Y675 71 aa6.19□□□□□ -1.42
SNX17-208ENST00000493711 NDUFC1O43677 76 aa6.17□□□□□ -1.42
SNX17-208ENST00000493711 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
SNX17-208ENST00000493711 MT1HP80294 61 aa6.15□□□□□ -1.42
SNX17-208ENST00000493711 SPANXA2-OT1Q8N9U9 137 aa6.13□□□□□ -1.43
SNX17-208ENST00000493711 M0R2T5 61 aa6.12□□□□□ -1.43
SNX17-208ENST00000493711 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
SNX17-208ENST00000493711 S4R3F8 94 aa6.09□□□□□ -1.43
SNX17-208ENST00000493711 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
SNX17-208ENST00000493711 ACYP2P14621 99 aa6.07□□□□□ -1.44
SNX17-208ENST00000493711 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
SNX17-208ENST00000493711 H7BZZ5 65 aa6.05□□□□□ -1.44
SNX17-208ENST00000493711 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
SNX17-208ENST00000493711 LCA10Q71F78 164 aa6.01□□□□□ -1.45
SNX17-208ENST00000493711 CYSTM1Q9H1C7 97 aa6□□□□□ -1.45
SNX17-208ENST00000493711 ATP5EP56381 51 aaPredicted RBP5.98□□□□□ -1.45
SNX17-208ENST00000493711 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
SNX17-208ENST00000493711 SPTSSBQ8NFR3 76 aa5.98□□□□□ -1.45
SNX17-208ENST00000493711 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
SNX17-208ENST00000493711 TMEM258P61165 79 aa5.94□□□□□ -1.46
SNX17-208ENST00000493711 PCP4P48539 62 aa5.92□□□□□ -1.46
SNX17-208ENST00000493711 COA5Q86WW8 74 aa5.89□□□□□ -1.47
SNX17-208ENST00000493711 H0YAA0 97 aa5.87□□□□□ -1.47
SNX17-208ENST00000493711 MT2AP02795 61 aa5.84□□□□□ -1.47
SNX17-208ENST00000493711 KRTAP10-10P60014 251 aa5.82□□□□□ -1.48
SNX17-208ENST00000493711 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
SNX17-208ENST00000493711 USH2AO75445 5202 aa5.78□□□□□ -1.48
SNX17-208ENST00000493711 MT1FP04733 61 aa5.78□□□□□ -1.48
SNX17-208ENST00000493711 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
SNX17-208ENST00000493711 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
SNX17-208ENST00000493711 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
SNX17-208ENST00000493711 FCGBPQ9Y6R7 5405 aaPredicted RBP5.72□□□□□ -1.49
SNX17-208ENST00000493711 SEC61GP60059 68 aa5.72□□□□□ -1.49
SNX17-208ENST00000493711 SYNE2Q8WXH0 6885 aaKnown RBP5.66□□□□□ -1.5
SNX17-208ENST00000493711 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.5
SNX17-208ENST00000493711 P0C880 135 aa5.64□□□□□ -1.51
SNX17-208ENST00000493711 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
SNX17-208ENST00000493711 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
SNX17-208ENST00000493711 R4GN34 69 aa5.62□□□□□ -1.51
SNX17-208ENST00000493711 A0A1B0GU69 56 aa5.61□□□□□ -1.51
SNX17-208ENST00000493711 LCE1AQ5T7P2 110 aa5.61□□□□□ -1.51
SNX17-208ENST00000493711 PRR15LQ9BU68 103 aa5.61□□□□□ -1.51
SNX17-208ENST00000493711 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
SNX17-208ENST00000493711 M0QZ58 72 aa5.59□□□□□ -1.51
SNX17-208ENST00000493711 V9GYY9 64 aa5.59□□□□□ -1.51
SNX17-208ENST00000493711 SMIM26A0A096LP01 95 aa5.57□□□□□ -1.52
SNX17-208ENST00000493711 A0A1B0GU33 70 aa5.53□□□□□ -1.52
SNX17-208ENST00000493711 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
SNX17-208ENST00000493711 Q5VV11 94 aa5.52□□□□□ -1.53
SNX17-208ENST00000493711 Q1T7F1 81 aa5.51□□□□□ -1.53
SNX17-208ENST00000493711 LINC01554Q52M75 96 aa5.44□□□□□ -1.54
SNX17-208ENST00000493711 A6NN06 94 aa5.43□□□□□ -1.54
SNX17-208ENST00000493711 PLAC4Q8WY50 150 aa5.42□□□□□ -1.54
SNX17-208ENST00000493711 UQCR11O14957 56 aa5.41□□□□□ -1.54
SNX17-208ENST00000493711 MT1BP07438 61 aa5.41□□□□□ -1.54
SNX17-208ENST00000493711 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
SNX17-208ENST00000493711 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
SNX17-208ENST00000493711 PSPHP1O15172 72 aa5.38□□□□□ -1.55
SNX17-208ENST00000493711 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
SNX17-208ENST00000493711 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.55
SNX17-208ENST00000493711 NEBP20929 6669 aa5.34□□□□□ -1.55
SNX17-208ENST00000493711 A0A0D9SG42 100 aa5.33□□□□□ -1.56
SNX17-208ENST00000493711 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
SNX17-208ENST00000493711 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
SNX17-208ENST00000493711 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
SNX17-208ENST00000493711 A6NED7 52 aa5.27□□□□□ -1.57
SNX17-208ENST00000493711 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
SNX17-208ENST00000493711 A8MU10 97 aa5.25□□□□□ -1.57
SNX17-208ENST00000493711 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
SNX17-208ENST00000493711 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
SNX17-208ENST00000493711 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
SNX17-208ENST00000493711 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
SNX17-208ENST00000493711 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
SNX17-208ENST00000493711 K7ERS5 55 aa5.2□□□□□ -1.58
SNX17-208ENST00000493711 KRTAP12-2P59991 146 aa5.19□□□□□ -1.58
SNX17-208ENST00000493711 MT1XP80297 61 aa5.18□□□□□ -1.58
SNX17-208ENST00000493711 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
SNX17-208ENST00000493711 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
SNX17-208ENST00000493711 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms