RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 IMUPQ9GZP8 106 aa3.37□□□□□ -1.87
TOP3A-207ENST00000493648 A0A087WVE0 104 aa3.36□□□□□ -1.87
TOP3A-207ENST00000493648 MT1FP04733 61 aa3.36□□□□□ -1.87
TOP3A-207ENST00000493648 TRAV22A0A0B4J277 110 aa3.32□□□□□ -1.88
TOP3A-207ENST00000493648 C1orf64Q8NEQ6 169 aa3.32□□□□□ -1.88
TOP3A-207ENST00000493648 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
TOP3A-207ENST00000493648 UQCRQO14949 82 aa3.31□□□□□ -1.88
TOP3A-207ENST00000493648 CYP4F30PQ9H0H9 118 aa3.31□□□□□ -1.88
TOP3A-207ENST00000493648 SCGB1A1P11684 91 aa3.3□□□□□ -1.88
TOP3A-207ENST00000493648 KRTAP3-1Q9BYR8 98 aa3.3□□□□□ -1.88
TOP3A-207ENST00000493648 S4R3F8 94 aa3.3□□□□□ -1.88
TOP3A-207ENST00000493648 ATOX1O00244 68 aa3.29□□□□□ -1.88
TOP3A-207ENST00000493648 FAM236AA0A1B0GUQ0 79 aa3.28□□□□□ -1.88
TOP3A-207ENST00000493648 FAM236BA0A1B0GV22 79 aa3.28□□□□□ -1.88
TOP3A-207ENST00000493648 H0Y9P7 68 aa3.28□□□□□ -1.88
TOP3A-207ENST00000493648 C5orf47Q569G3 176 aa3.28□□□□□ -1.88
TOP3A-207ENST00000493648 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
TOP3A-207ENST00000493648 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
TOP3A-207ENST00000493648 USH2AO75445 5202 aa3.27□□□□□ -1.89
TOP3A-207ENST00000493648 LCA10Q71F78 164 aa3.26□□□□□ -1.89
TOP3A-207ENST00000493648 MP68P56378 58 aa3.25□□□□□ -1.89
TOP3A-207ENST00000493648 SMIM20Q8N5G0 67 aa3.25□□□□□ -1.89
TOP3A-207ENST00000493648 TRAV7A0A075B6U4 112 aa3.24□□□□□ -1.89
TOP3A-207ENST00000493648 LINC00208Q96KT6 92 aa3.24□□□□□ -1.89
TOP3A-207ENST00000493648 SERP2Q8N6R1 65 aa3.22□□□□□ -1.89
TOP3A-207ENST00000493648 SSPOA2VEC9 5147 aa3.21□□□□□ -1.89
TOP3A-207ENST00000493648 A8MUN3 132 aa3.2□□□□□ -1.9
TOP3A-207ENST00000493648 H3BPC8 53 aa3.2□□□□□ -1.9
TOP3A-207ENST00000493648 KLKP1Q107X0 134 aa3.2□□□□□ -1.9
TOP3A-207ENST00000493648 NDUFC1O43677 76 aa3.19□□□□□ -1.9
TOP3A-207ENST00000493648 COX7CP15954 63 aa3.18□□□□□ -1.9
TOP3A-207ENST00000493648 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
TOP3A-207ENST00000493648 ANAPC13Q9BS18 74 aa3.18□□□□□ -1.9
TOP3A-207ENST00000493648 C20orf197Q8N268 126 aa3.16□□□□□ -1.9
TOP3A-207ENST00000493648 FCGBPQ9Y6R7 5405 aaPredicted RBP3.15□□□□□ -1.9
TOP3A-207ENST00000493648 CRIPTQ9P021 101 aa3.15□□□□□ -1.91
TOP3A-207ENST00000493648 SNURFQ9Y675 71 aa3.15□□□□□ -1.91
TOP3A-207ENST00000493648 H0YAA0 97 aa3.14□□□□□ -1.91
TOP3A-207ENST00000493648 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
TOP3A-207ENST00000493648 Q5VV11 94 aa3.13□□□□□ -1.91
TOP3A-207ENST00000493648 CCDC179H3BU77 68 aa3.12□□□□□ -1.91
TOP3A-207ENST00000493648 KRTAP19-8Q3LI54 63 aa3.11□□□□□ -1.91
TOP3A-207ENST00000493648 ADM2Q7Z4H4 148 aa3.11□□□□□ -1.91
TOP3A-207ENST00000493648 CYSTM1Q9H1C7 97 aa3.11□□□□□ -1.91
TOP3A-207ENST00000493648 DMAC1Q96GE9 116 aa3.1□□□□□ -1.91
TOP3A-207ENST00000493648 MT1BP07438 61 aa3.09□□□□□ -1.91
TOP3A-207ENST00000493648 A6NN06 94 aa3.08□□□□□ -1.92
TOP3A-207ENST00000493648 H7BZZ5 65 aa3.08□□□□□ -1.92
TOP3A-207ENST00000493648 ACYP2P14621 99 aa3.08□□□□□ -1.92
TOP3A-207ENST00000493648 PCP4P48539 62 aa3.07□□□□□ -1.92
TOP3A-207ENST00000493648 SPANXA2-OT1Q8N9U9 137 aa3.07□□□□□ -1.92
TOP3A-207ENST00000493648 SPTSSBQ8NFR3 76 aa3.05□□□□□ -1.92
TOP3A-207ENST00000493648 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
TOP3A-207ENST00000493648 R4GN34 69 aa3.03□□□□□ -1.92
TOP3A-207ENST00000493648 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
TOP3A-207ENST00000493648 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
TOP3A-207ENST00000493648 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
TOP3A-207ENST00000493648 P0C880 135 aa3.02□□□□□ -1.93
TOP3A-207ENST00000493648 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
TOP3A-207ENST00000493648 M0QZ58 72 aa3□□□□□ -1.93
TOP3A-207ENST00000493648 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
TOP3A-207ENST00000493648 TMEM258P61165 79 aa2.99□□□□□ -1.93
TOP3A-207ENST00000493648 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
TOP3A-207ENST00000493648 ATP5EP56381 51 aaPredicted RBP2.97□□□□□ -1.93
TOP3A-207ENST00000493648 COA5Q86WW8 74 aa2.97□□□□□ -1.93
TOP3A-207ENST00000493648 LINC01554Q52M75 96 aa2.96□□□□□ -1.94
TOP3A-207ENST00000493648 KRTAP15-1Q3LI76 137 aa2.93□□□□□ -1.94
TOP3A-207ENST00000493648 MT1XP80297 61 aa2.91□□□□□ -1.94
TOP3A-207ENST00000493648 SERP1Q9Y6X1 66 aa2.91□□□□□ -1.94
TOP3A-207ENST00000493648 SEC61GP60059 68 aa2.89□□□□□ -1.95
TOP3A-207ENST00000493648 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
TOP3A-207ENST00000493648 RPS28P62857 69 aaKnown RBP2.88□□□□□ -1.95
TOP3A-207ENST00000493648 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
TOP3A-207ENST00000493648 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
TOP3A-207ENST00000493648 NEBP20929 6669 aa2.83□□□□□ -1.96
TOP3A-207ENST00000493648 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
TOP3A-207ENST00000493648 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
TOP3A-207ENST00000493648 SMIM26A0A096LP01 95 aa2.82□□□□□ -1.96
TOP3A-207ENST00000493648 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
TOP3A-207ENST00000493648 A0A1B0GU33 70 aa2.81□□□□□ -1.96
TOP3A-207ENST00000493648 A0A1B0GU69 56 aa2.81□□□□□ -1.96
TOP3A-207ENST00000493648 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
TOP3A-207ENST00000493648 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
TOP3A-207ENST00000493648 Q1T7F1 81 aa2.8□□□□□ -1.96
TOP3A-207ENST00000493648 MUC12Q9UKN1 5478 aa2.8□□□□□ -1.96
TOP3A-207ENST00000493648 A0A0D9SG42 100 aa2.78□□□□□ -1.96
TOP3A-207ENST00000493648 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
TOP3A-207ENST00000493648 KRTAP10-12P60413 245 aa2.78□□□□□ -1.96
TOP3A-207ENST00000493648 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
TOP3A-207ENST00000493648 SPATA8Q6RVD6 105 aa2.78□□□□□ -1.96
TOP3A-207ENST00000493648 PRR15LQ9BU68 103 aa2.78□□□□□ -1.96
TOP3A-207ENST00000493648 V9GYY9 64 aa2.78□□□□□ -1.96
TOP3A-207ENST00000493648 KMT2DO14686 5537 aa2.78□□□□□ -1.97
TOP3A-207ENST00000493648 SPRR2EP22531 72 aa2.76□□□□□ -1.97
TOP3A-207ENST00000493648 SPRR2BP35325 72 aa2.76□□□□□ -1.97
TOP3A-207ENST00000493648 SPRR2AP35326 72 aa2.76□□□□□ -1.97
TOP3A-207ENST00000493648 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
TOP3A-207ENST00000493648 PSPHP1O15172 72 aa2.75□□□□□ -1.97
TOP3A-207ENST00000493648 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
TOP3A-207ENST00000493648 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms