RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 FAM236BA0A1B0GV22 79 aa3.66□□□□□ -1.82
TPR-208ENST00000492973 SCGB1A1P11684 91 aa3.65□□□□□ -1.83
TPR-208ENST00000492973 A8MUU9 505 aa3.64□□□□□ -1.83
TPR-208ENST00000492973 C20orf166-AS1Q96NR2 134 aa3.64□□□□□ -1.83
TPR-208ENST00000492973 RPL37P61927 97 aaKnown RBP3.63□□□□□ -1.83
TPR-208ENST00000492973 PCOTHQ58A44 107 aa3.62□□□□□ -1.83
TPR-208ENST00000492973 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
TPR-208ENST00000492973 ATOX1O00244 68 aa3.61□□□□□ -1.83
TPR-208ENST00000492973 NDUFS5O43920 106 aa3.61□□□□□ -1.83
TPR-208ENST00000492973 Q5W150 140 aa3.61□□□□□ -1.83
TPR-208ENST00000492973 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
TPR-208ENST00000492973 TRAV7A0A075B6U4 112 aa3.6□□□□□ -1.83
TPR-208ENST00000492973 UQCRQO14949 82 aa3.6□□□□□ -1.83
TPR-208ENST00000492973 SMIM20Q8N5G0 67 aa3.6□□□□□ -1.83
TPR-208ENST00000492973 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
TPR-208ENST00000492973 CRCT1Q9UGL9 99 aa3.6□□□□□ -1.83
TPR-208ENST00000492973 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.83
TPR-208ENST00000492973 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
TPR-208ENST00000492973 SERP2Q8N6R1 65 aa3.58□□□□□ -1.84
TPR-208ENST00000492973 C5orf47Q569G3 176 aa3.57□□□□□ -1.84
TPR-208ENST00000492973 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
TPR-208ENST00000492973 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
TPR-208ENST00000492973 COX7CP15954 63 aa3.56□□□□□ -1.84
TPR-208ENST00000492973 ATP11AUNQ6ZP68 121 aa3.56□□□□□ -1.84
TPR-208ENST00000492973 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
TPR-208ENST00000492973 H0Y9P7 68 aa3.55□□□□□ -1.84
TPR-208ENST00000492973 A0A0U1RQV1 116 aa3.53□□□□□ -1.84
TPR-208ENST00000492973 H3BPC8 53 aa3.53□□□□□ -1.84
TPR-208ENST00000492973 MP68P56378 58 aa3.53□□□□□ -1.84
TPR-208ENST00000492973 C1orf64Q8NEQ6 169 aa3.53□□□□□ -1.84
TPR-208ENST00000492973 LINC00208Q96KT6 92 aa3.53□□□□□ -1.84
TPR-208ENST00000492973 CCDC179H3BU77 68 aa3.52□□□□□ -1.85
TPR-208ENST00000492973 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
TPR-208ENST00000492973 C20orf197Q8N268 126 aa3.52□□□□□ -1.85
TPR-208ENST00000492973 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
TPR-208ENST00000492973 CYP4F30PQ9H0H9 118 aa3.51□□□□□ -1.85
TPR-208ENST00000492973 SNURFQ9Y675 71 aa3.51□□□□□ -1.85
TPR-208ENST00000492973 LOC101927531A0A1B0GV80 90 aa3.5□□□□□ -1.85
TPR-208ENST00000492973 SPINK7P58062 85 aa3.5□□□□□ -1.85
TPR-208ENST00000492973 KLKP1Q107X0 134 aa3.49□□□□□ -1.85
TPR-208ENST00000492973 C7orf65Q6ZTY9 151 aa3.48□□□□□ -1.85
TPR-208ENST00000492973 CYSTM1Q9H1C7 97 aa3.48□□□□□ -1.85
TPR-208ENST00000492973 HRES1P13985 223 aa3.46□□□□□ -1.86
TPR-208ENST00000492973 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
TPR-208ENST00000492973 H7BZZ5 65 aa3.44□□□□□ -1.86
TPR-208ENST00000492973 NDUFC1O43677 76 aa3.44□□□□□ -1.86
TPR-208ENST00000492973 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
TPR-208ENST00000492973 MT1HP80294 61 aa3.42□□□□□ -1.86
TPR-208ENST00000492973 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
TPR-208ENST00000492973 COX6B2Q6YFQ2 88 aa3.42□□□□□ -1.86
TPR-208ENST00000492973 SPANXA2-OT1Q8N9U9 137 aa3.4□□□□□ -1.87
TPR-208ENST00000492973 RBM12B-AS1Q9P1G2 102 aa3.38□□□□□ -1.87
TPR-208ENST00000492973 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
TPR-208ENST00000492973 DMAC1Q96GE9 116 aa3.37□□□□□ -1.87
TPR-208ENST00000492973 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
TPR-208ENST00000492973 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
TPR-208ENST00000492973 TMEM258P61165 79 aa3.36□□□□□ -1.87
TPR-208ENST00000492973 A8MUN3 132 aa3.34□□□□□ -1.87
TPR-208ENST00000492973 ACYP2P14621 99 aa3.34□□□□□ -1.87
TPR-208ENST00000492973 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
TPR-208ENST00000492973 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
TPR-208ENST00000492973 M0R2T5 61 aa3.32□□□□□ -1.88
TPR-208ENST00000492973 COA5Q86WW8 74 aa3.3□□□□□ -1.88
TPR-208ENST00000492973 LCA10Q71F78 164 aa3.28□□□□□ -1.88
TPR-208ENST00000492973 S4R3F8 94 aa3.28□□□□□ -1.88
TPR-208ENST00000492973 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
TPR-208ENST00000492973 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
TPR-208ENST00000492973 CHKB-CPT1BH3BT56 60 aa3.25□□□□□ -1.89
TPR-208ENST00000492973 MT2AP02795 61 aa3.25□□□□□ -1.89
TPR-208ENST00000492973 RPS28P62857 69 aaKnown RBP3.25□□□□□ -1.89
TPR-208ENST00000492973 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
TPR-208ENST00000492973 CSAG1Q6PB30 78 aa3.23□□□□□ -1.89
TPR-208ENST00000492973 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
TPR-208ENST00000492973 NEBP20929 6669 aa3.23□□□□□ -1.89
TPR-208ENST00000492973 MT1FP04733 61 aa3.22□□□□□ -1.89
TPR-208ENST00000492973 SPTSSBQ8NFR3 76 aa3.22□□□□□ -1.89
TPR-208ENST00000492973 USH2AO75445 5202 aa3.21□□□□□ -1.9
TPR-208ENST00000492973 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
TPR-208ENST00000492973 SMIM26A0A096LP01 95 aa3.18□□□□□ -1.9
TPR-208ENST00000492973 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
TPR-208ENST00000492973 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
TPR-208ENST00000492973 LINC01558Q9Y6Z2 57 aa3.16□□□□□ -1.9
TPR-208ENST00000492973 H0YAA0 97 aa3.15□□□□□ -1.91
TPR-208ENST00000492973 Q1T7F1 81 aa3.15□□□□□ -1.91
TPR-208ENST00000492973 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
TPR-208ENST00000492973 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
TPR-208ENST00000492973 V9GYY9 64 aa3.12□□□□□ -1.91
TPR-208ENST00000492973 P0C880 135 aa3.11□□□□□ -1.91
TPR-208ENST00000492973 A0A1B0GU69 56 aa3.1□□□□□ -1.91
TPR-208ENST00000492973 SEC61GP60059 68 aa3.1□□□□□ -1.91
TPR-208ENST00000492973 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
TPR-208ENST00000492973 PSPHP1O15172 72 aa3.08□□□□□ -1.92
TPR-208ENST00000492973 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
TPR-208ENST00000492973 Q5VV11 94 aa3.06□□□□□ -1.92
TPR-208ENST00000492973 A0A1B0GU33 70 aa3.05□□□□□ -1.92
TPR-208ENST00000492973 SPRR2GQ9BYE4 73 aa3.04□□□□□ -1.92
TPR-208ENST00000492973 CRIPTQ9P021 101 aa3.04□□□□□ -1.92
TPR-208ENST00000492973 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
TPR-208ENST00000492973 FCGBPQ9Y6R7 5405 aaPredicted RBP3.03□□□□□ -1.92
TPR-208ENST00000492973 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms