RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
FDPS-218ENST00000492887 SPINK7P58062 85 aa4.24□□□□□ -1.73
FDPS-218ENST00000492887 CYSTM1Q9H1C7 97 aa4.24□□□□□ -1.73
FDPS-218ENST00000492887 H3BS24 57 aa4.23□□□□□ -1.73
FDPS-218ENST00000492887 LRP2P98164 4655 aa4.23□□□□□ -1.73
FDPS-218ENST00000492887 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
FDPS-218ENST00000492887 FAM236DA0A1B0GTK5 79 aa4.22□□□□□ -1.73
FDPS-218ENST00000492887 FAM236CP0DP71 79 aa4.22□□□□□ -1.73
FDPS-218ENST00000492887 H7BZZ5 65 aa4.21□□□□□ -1.74
FDPS-218ENST00000492887 HRES1P13985 223 aa4.21□□□□□ -1.74
FDPS-218ENST00000492887 TMEM258P61165 79 aa4.21□□□□□ -1.74
FDPS-218ENST00000492887 ATP5EP56381 51 aaPredicted RBP4.19□□□□□ -1.74
FDPS-218ENST00000492887 C4orf26Q17RF5 130 aa4.18□□□□□ -1.74
FDPS-218ENST00000492887 RBM12B-AS1Q9P1G2 102 aa4.18□□□□□ -1.74
FDPS-218ENST00000492887 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
FDPS-218ENST00000492887 SPANXA2-OT1Q8N9U9 137 aa4.17□□□□□ -1.74
FDPS-218ENST00000492887 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
FDPS-218ENST00000492887 ACYP2P14621 99 aa4.13□□□□□ -1.75
FDPS-218ENST00000492887 COX6B2Q6YFQ2 88 aa4.12□□□□□ -1.75
FDPS-218ENST00000492887 A8MUN3 132 aa4.11□□□□□ -1.75
FDPS-218ENST00000492887 DMAC1Q96GE9 116 aa4.11□□□□□ -1.75
FDPS-218ENST00000492887 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
FDPS-218ENST00000492887 KRTAP4-1Q9BYQ7 146 aa4.1□□□□□ -1.75
FDPS-218ENST00000492887 COA5Q86WW8 74 aa4.09□□□□□ -1.75
FDPS-218ENST00000492887 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
FDPS-218ENST00000492887 S4R3F8 94 aa4.06□□□□□ -1.76
FDPS-218ENST00000492887 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
FDPS-218ENST00000492887 SPTSSBQ8NFR3 76 aa4.04□□□□□ -1.76
FDPS-218ENST00000492887 MPLKIPQ8TAP9 179 aa4.04□□□□□ -1.76
FDPS-218ENST00000492887 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
FDPS-218ENST00000492887 LCA10Q71F78 164 aa3.99□□□□□ -1.77
FDPS-218ENST00000492887 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
FDPS-218ENST00000492887 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
FDPS-218ENST00000492887 SMIM26A0A096LP01 95 aa3.95□□□□□ -1.78
FDPS-218ENST00000492887 M0R2T5 61 aa3.95□□□□□ -1.78
FDPS-218ENST00000492887 UBR4Q5T4S7 5183 aa3.94□□□□□ -1.78
FDPS-218ENST00000492887 CSAG1Q6PB30 78 aa3.94□□□□□ -1.78
FDPS-218ENST00000492887 SEC61GP60059 68 aa3.93□□□□□ -1.78
FDPS-218ENST00000492887 V9GYY9 64 aa3.92□□□□□ -1.78
FDPS-218ENST00000492887 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
FDPS-218ENST00000492887 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
FDPS-218ENST00000492887 A0A1B0GU69 56 aa3.9□□□□□ -1.79
FDPS-218ENST00000492887 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
FDPS-218ENST00000492887 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
FDPS-218ENST00000492887 MT1HP80294 61 aa3.87□□□□□ -1.79
FDPS-218ENST00000492887 MUC2Q02817 5179 aa3.87□□□□□ -1.79
FDPS-218ENST00000492887 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
FDPS-218ENST00000492887 PSPHP1O15172 72 aa3.86□□□□□ -1.79
FDPS-218ENST00000492887 Q1T7F1 81 aa3.86□□□□□ -1.79
FDPS-218ENST00000492887 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
FDPS-218ENST00000492887 A6NED7 52 aa3.78□□□□□ -1.8
FDPS-218ENST00000492887 H0YAA0 97 aa3.78□□□□□ -1.8
FDPS-218ENST00000492887 P0C880 135 aa3.77□□□□□ -1.81
FDPS-218ENST00000492887 Q5VV11 94 aa3.77□□□□□ -1.81
FDPS-218ENST00000492887 A0A1B0GU33 70 aa3.76□□□□□ -1.81
FDPS-218ENST00000492887 UQCR11O14957 56 aa3.75□□□□□ -1.81
FDPS-218ENST00000492887 M0QZ58 72 aa3.74□□□□□ -1.81
FDPS-218ENST00000492887 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
FDPS-218ENST00000492887 R4GN34 69 aa3.74□□□□□ -1.81
FDPS-218ENST00000492887 KRTAP10-10P60014 251 aa3.73□□□□□ -1.81
FDPS-218ENST00000492887 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
FDPS-218ENST00000492887 SPATA8Q6RVD6 105 aa3.71□□□□□ -1.82
FDPS-218ENST00000492887 MT2AP02795 61 aa3.7□□□□□ -1.82
FDPS-218ENST00000492887 LINC01554Q52M75 96 aa3.7□□□□□ -1.82
FDPS-218ENST00000492887 BRK1Q8WUW1 75 aa3.69□□□□□ -1.82
FDPS-218ENST00000492887 A0A0D9SG42 100 aa3.68□□□□□ -1.82
FDPS-218ENST00000492887 CRIPTQ9P021 101 aa3.68□□□□□ -1.82
FDPS-218ENST00000492887 MT1FP04733 61 aa3.67□□□□□ -1.82
FDPS-218ENST00000492887 KRTAP13-4Q3LI77 160 aa3.66□□□□□ -1.82
FDPS-218ENST00000492887 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
FDPS-218ENST00000492887 A8MU10 97 aa3.64□□□□□ -1.83
FDPS-218ENST00000492887 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
FDPS-218ENST00000492887 K7ERS5 55 aa3.61□□□□□ -1.83
FDPS-218ENST00000492887 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
FDPS-218ENST00000492887 SPRR2GQ9BYE4 73 aa3.56□□□□□ -1.84
FDPS-218ENST00000492887 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
FDPS-218ENST00000492887 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
FDPS-218ENST00000492887 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
FDPS-218ENST00000492887 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
FDPS-218ENST00000492887 KRTAP12-2P59991 146 aa3.52□□□□□ -1.85
FDPS-218ENST00000492887 A6NN06 94 aa3.51□□□□□ -1.85
FDPS-218ENST00000492887 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
FDPS-218ENST00000492887 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
FDPS-218ENST00000492887 MT1BP07438 61 aa3.44□□□□□ -1.86
FDPS-218ENST00000492887 ROMO1P60602 79 aa3.39□□□□□ -1.87
FDPS-218ENST00000492887 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
FDPS-218ENST00000492887 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
FDPS-218ENST00000492887 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
FDPS-218ENST00000492887 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
FDPS-218ENST00000492887 USH2AO75445 5202 aa3.34□□□□□ -1.87
FDPS-218ENST00000492887 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
FDPS-218ENST00000492887 MT1XP80297 61 aa3.32□□□□□ -1.88
FDPS-218ENST00000492887 TNP1P09430 55 aa3.31□□□□□ -1.88
FDPS-218ENST00000492887 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
FDPS-218ENST00000492887 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
FDPS-218ENST00000492887 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
FDPS-218ENST00000492887 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
FDPS-218ENST00000492887 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
FDPS-218ENST00000492887 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
FDPS-218ENST00000492887 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms