RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 LPAP08519 4548 aa7.12□□□□□ -1.27
LSS-210ENST00000491729 UQCR11O14957 56 aa7.1□□□□□ -1.27
LSS-210ENST00000491729 J3QL48 77 aa7.1□□□□□ -1.27
LSS-210ENST00000491729 C9orf92A6NGG3 77 aa7.08□□□□□ -1.28
LSS-210ENST00000491729 SPATA8Q6RVD6 105 aa7.08□□□□□ -1.28
LSS-210ENST00000491729 SEC61GP60059 68 aa7.05□□□□□ -1.28
LSS-210ENST00000491729 MIR22HGQ0VDD5 57 aa7.05□□□□□ -1.28
LSS-210ENST00000491729 LRP2P98164 4655 aa7.04□□□□□ -1.28
LSS-210ENST00000491729 HMCN2Q8NDA2 5059 aa6.97□□□□□ -1.29
LSS-210ENST00000491729 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
LSS-210ENST00000491729 XP32Q5T750 250 aa6.91□□□□□ -1.3
LSS-210ENST00000491729 COX6B2Q6YFQ2 88 aa6.91□□□□□ -1.3
LSS-210ENST00000491729 RBM12B-AS1Q9P1G2 102 aa6.89□□□□□ -1.31
LSS-210ENST00000491729 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
LSS-210ENST00000491729 RPL37P61927 97 aaKnown RBP6.84□□□□□ -1.31
LSS-210ENST00000491729 A0A1B0GU33 70 aa6.82□□□□□ -1.32
LSS-210ENST00000491729 H0YAA0 97 aa6.8□□□□□ -1.32
LSS-210ENST00000491729 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
LSS-210ENST00000491729 MUC2Q02817 5179 aa6.79□□□□□ -1.32
LSS-210ENST00000491729 UBR4Q5T4S7 5183 aa6.77□□□□□ -1.33
LSS-210ENST00000491729 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
LSS-210ENST00000491729 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
LSS-210ENST00000491729 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
LSS-210ENST00000491729 RNF213Q63HN8 5207 aa6.69□□□□□ -1.34
LSS-210ENST00000491729 K7ERS5 55 aa6.68□□□□□ -1.34
LSS-210ENST00000491729 S4R3F8 94 aa6.68□□□□□ -1.34
LSS-210ENST00000491729 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
LSS-210ENST00000491729 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.34
LSS-210ENST00000491729 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
LSS-210ENST00000491729 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
LSS-210ENST00000491729 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.35
LSS-210ENST00000491729 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
LSS-210ENST00000491729 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
LSS-210ENST00000491729 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
LSS-210ENST00000491729 FAT4Q6V0I7 4981 aa6.49□□□□□ -1.37
LSS-210ENST00000491729 KRTAP25-1Q3LHN0 102 aa6.49□□□□□ -1.37
LSS-210ENST00000491729 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
LSS-210ENST00000491729 ROMO1P60602 79 aa6.45□□□□□ -1.38
LSS-210ENST00000491729 P0C880 135 aa6.44□□□□□ -1.38
LSS-210ENST00000491729 A0A0D9SG42 100 aa6.42□□□□□ -1.38
LSS-210ENST00000491729 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
LSS-210ENST00000491729 M0QZ58 72 aa6.38□□□□□ -1.39
LSS-210ENST00000491729 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
LSS-210ENST00000491729 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
LSS-210ENST00000491729 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
LSS-210ENST00000491729 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
LSS-210ENST00000491729 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
LSS-210ENST00000491729 MT1HP80294 61 aa6.22□□□□□ -1.41
LSS-210ENST00000491729 R4GN34 69 aa6.19□□□□□ -1.42
LSS-210ENST00000491729 H3BS24 57 aa6.15□□□□□ -1.42
LSS-210ENST00000491729 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.43
LSS-210ENST00000491729 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
LSS-210ENST00000491729 M0R2T5 61 aa6.05□□□□□ -1.44
LSS-210ENST00000491729 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
LSS-210ENST00000491729 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
LSS-210ENST00000491729 MT2AP02795 61 aa5.95□□□□□ -1.46
LSS-210ENST00000491729 MT1FP04733 61 aa5.93□□□□□ -1.46
LSS-210ENST00000491729 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
LSS-210ENST00000491729 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
LSS-210ENST00000491729 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
LSS-210ENST00000491729 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
LSS-210ENST00000491729 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
LSS-210ENST00000491729 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
LSS-210ENST00000491729 A0A0A0MQY5 61 aa5.76□□□□□ -1.49
LSS-210ENST00000491729 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
LSS-210ENST00000491729 LCE2BO14633 110 aa5.69□□□□□ -1.5
LSS-210ENST00000491729 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
LSS-210ENST00000491729 USH2AO75445 5202 aa5.67□□□□□ -1.5
LSS-210ENST00000491729 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
LSS-210ENST00000491729 TNP1P09430 55 aa5.66□□□□□ -1.5
LSS-210ENST00000491729 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
LSS-210ENST00000491729 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.51
LSS-210ENST00000491729 MT1BP07438 61 aa5.59□□□□□ -1.52
LSS-210ENST00000491729 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
LSS-210ENST00000491729 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
LSS-210ENST00000491729 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
LSS-210ENST00000491729 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
LSS-210ENST00000491729 KRTAP9-2Q9BYQ4 174 aa5.42□□□□□ -1.54
LSS-210ENST00000491729 MT1XP80297 61 aa5.36□□□□□ -1.55
LSS-210ENST00000491729 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
LSS-210ENST00000491729 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
LSS-210ENST00000491729 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
LSS-210ENST00000491729 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
LSS-210ENST00000491729 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
LSS-210ENST00000491729 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
LSS-210ENST00000491729 KMT2DO14686 5537 aa5.18□□□□□ -1.58
LSS-210ENST00000491729 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
LSS-210ENST00000491729 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
LSS-210ENST00000491729 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
LSS-210ENST00000491729 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
LSS-210ENST00000491729 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
LSS-210ENST00000491729 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
LSS-210ENST00000491729 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
LSS-210ENST00000491729 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
LSS-210ENST00000491729 KRTAP9-6A0A140TA67 174 aa5□□□□□ -1.61
LSS-210ENST00000491729 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
LSS-210ENST00000491729 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
LSS-210ENST00000491729 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.82□□□□□ -1.64
LSS-210ENST00000491729 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
LSS-210ENST00000491729 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms