RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-211ENST00000491685 MPLKIPQ8TAP9 179 aa5.49□□□□□ -1.53
TMEM39A-211ENST00000491685 MT1FP04733 61 aa5.48□□□□□ -1.53
TMEM39A-211ENST00000491685 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
TMEM39A-211ENST00000491685 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
TMEM39A-211ENST00000491685 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
TMEM39A-211ENST00000491685 LCE2BO14633 110 aa5.45□□□□□ -1.54
TMEM39A-211ENST00000491685 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
TMEM39A-211ENST00000491685 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
TMEM39A-211ENST00000491685 A8MUN3 132 aa5.43□□□□□ -1.54
TMEM39A-211ENST00000491685 C4orf26Q17RF5 130 aa5.43□□□□□ -1.54
TMEM39A-211ENST00000491685 PCP4P48539 62 aa5.42□□□□□ -1.54
TMEM39A-211ENST00000491685 KRTAP9-3Q9BYQ3 159 aa5.42□□□□□ -1.54
TMEM39A-211ENST00000491685 ATP5EP56381 51 aaPredicted RBP5.4□□□□□ -1.54
TMEM39A-211ENST00000491685 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
TMEM39A-211ENST00000491685 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
TMEM39A-211ENST00000491685 SNURFQ9Y675 71 aa5.39□□□□□ -1.55
TMEM39A-211ENST00000491685 H7BZZ5 65 aa5.38□□□□□ -1.55
TMEM39A-211ENST00000491685 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
TMEM39A-211ENST00000491685 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
TMEM39A-211ENST00000491685 TMEM258P61165 79 aa5.36□□□□□ -1.55
TMEM39A-211ENST00000491685 DMAC1Q96GE9 116 aa5.33□□□□□ -1.56
TMEM39A-211ENST00000491685 ACYP2P14621 99 aa5.32□□□□□ -1.56
TMEM39A-211ENST00000491685 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
TMEM39A-211ENST00000491685 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
TMEM39A-211ENST00000491685 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
TMEM39A-211ENST00000491685 S4R3F8 94 aa5.29□□□□□ -1.56
TMEM39A-211ENST00000491685 CSAG1Q6PB30 78 aa5.28□□□□□ -1.56
TMEM39A-211ENST00000491685 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
TMEM39A-211ENST00000491685 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
TMEM39A-211ENST00000491685 LCA10Q71F78 164 aa5.21□□□□□ -1.58
TMEM39A-211ENST00000491685 NEBP20929 6669 aa5.18□□□□□ -1.58
TMEM39A-211ENST00000491685 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-211ENST00000491685 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
TMEM39A-211ENST00000491685 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
TMEM39A-211ENST00000491685 COA5Q86WW8 74 aa5.15□□□□□ -1.59
TMEM39A-211ENST00000491685 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
TMEM39A-211ENST00000491685 H0YAA0 97 aa5.1□□□□□ -1.59
TMEM39A-211ENST00000491685 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
TMEM39A-211ENST00000491685 V9GYY9 64 aa5.07□□□□□ -1.6
TMEM39A-211ENST00000491685 SMIM26A0A096LP01 95 aa5.03□□□□□ -1.6
TMEM39A-211ENST00000491685 CRIPTQ9P021 101 aa5.03□□□□□ -1.6
TMEM39A-211ENST00000491685 SEC61GP60059 68 aa5.01□□□□□ -1.61
TMEM39A-211ENST00000491685 ADM2Q7Z4H4 148 aa5.01□□□□□ -1.61
TMEM39A-211ENST00000491685 MT1BP07438 61 aa4.98□□□□□ -1.61
TMEM39A-211ENST00000491685 Q1T7F1 81 aa4.98□□□□□ -1.61
TMEM39A-211ENST00000491685 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
TMEM39A-211ENST00000491685 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
TMEM39A-211ENST00000491685 Q5VV11 94 aa4.97□□□□□ -1.61
TMEM39A-211ENST00000491685 A6NN06 94 aa4.95□□□□□ -1.62
TMEM39A-211ENST00000491685 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
TMEM39A-211ENST00000491685 A0A1B0GU69 56 aa4.92□□□□□ -1.62
TMEM39A-211ENST00000491685 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
TMEM39A-211ENST00000491685 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
TMEM39A-211ENST00000491685 R4GN34 69 aa4.91□□□□□ -1.62
TMEM39A-211ENST00000491685 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
TMEM39A-211ENST00000491685 KMT2DO14686 5537 aa4.88□□□□□ -1.63
TMEM39A-211ENST00000491685 M0QZ58 72 aa4.87□□□□□ -1.63
TMEM39A-211ENST00000491685 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
TMEM39A-211ENST00000491685 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
TMEM39A-211ENST00000491685 P0C880 135 aa4.86□□□□□ -1.63
TMEM39A-211ENST00000491685 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
TMEM39A-211ENST00000491685 A0A1B0GU33 70 aa4.82□□□□□ -1.64
TMEM39A-211ENST00000491685 UQCR11O14957 56 aa4.8□□□□□ -1.64
TMEM39A-211ENST00000491685 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
TMEM39A-211ENST00000491685 LINC01554Q52M75 96 aa4.77□□□□□ -1.65
TMEM39A-211ENST00000491685 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
TMEM39A-211ENST00000491685 PSPHP1O15172 72 aa4.74□□□□□ -1.65
TMEM39A-211ENST00000491685 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
TMEM39A-211ENST00000491685 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
TMEM39A-211ENST00000491685 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
TMEM39A-211ENST00000491685 A6NED7 52 aa4.67□□□□□ -1.66
TMEM39A-211ENST00000491685 MIR22HGQ0VDD5 57 aa4.67□□□□□ -1.66
TMEM39A-211ENST00000491685 SPRR2EP22531 72 aa4.66□□□□□ -1.66
TMEM39A-211ENST00000491685 SPRR2BP35325 72 aa4.66□□□□□ -1.66
TMEM39A-211ENST00000491685 SPRR2AP35326 72 aa4.66□□□□□ -1.66
TMEM39A-211ENST00000491685 MT1XP80297 61 aa4.63□□□□□ -1.67
TMEM39A-211ENST00000491685 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
TMEM39A-211ENST00000491685 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
TMEM39A-211ENST00000491685 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
TMEM39A-211ENST00000491685 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
TMEM39A-211ENST00000491685 K7ERS5 55 aa4.6□□□□□ -1.67
TMEM39A-211ENST00000491685 A0A0D9SG42 100 aa4.59□□□□□ -1.67
TMEM39A-211ENST00000491685 CAMK2N1Q7Z7J9 78 aa4.57□□□□□ -1.68
TMEM39A-211ENST00000491685 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
TMEM39A-211ENST00000491685 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
TMEM39A-211ENST00000491685 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
TMEM39A-211ENST00000491685 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
TMEM39A-211ENST00000491685 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
TMEM39A-211ENST00000491685 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
TMEM39A-211ENST00000491685 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
TMEM39A-211ENST00000491685 SPRR2DP22532 72 aa4.51□□□□□ -1.69
TMEM39A-211ENST00000491685 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
TMEM39A-211ENST00000491685 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
TMEM39A-211ENST00000491685 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
TMEM39A-211ENST00000491685 A8MU10 97 aa4.49□□□□□ -1.69
TMEM39A-211ENST00000491685 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
TMEM39A-211ENST00000491685 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
TMEM39A-211ENST00000491685 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
TMEM39A-211ENST00000491685 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms