RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 S4R3F8 94 aa10.63□□□□□ -0.71
VCPKMT-204ENST00000491402 TMEM258P61165 79 aa10.6□□□□□ -0.71
VCPKMT-204ENST00000491402 LCA10Q71F78 164 aa10.6□□□□□ -0.71
VCPKMT-204ENST00000491402 ATP5EP56381 51 aaPredicted RBP10.54□□□□□ -0.72
VCPKMT-204ENST00000491402 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
VCPKMT-204ENST00000491402 KRTAP10-6P60371 365 aaPredicted RBP10.47□□□□□ -0.73
VCPKMT-204ENST00000491402 COA5Q86WW8 74 aa10.47□□□□□ -0.73
VCPKMT-204ENST00000491402 CHKB-CPT1BH3BT56 60 aa10.46□□□□□ -0.74
VCPKMT-204ENST00000491402 LORP23490 312 aaPredicted RBP10.43□□□□□ -0.74
VCPKMT-204ENST00000491402 CSAG1Q6PB30 78 aa10.43□□□□□ -0.74
VCPKMT-204ENST00000491402 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
VCPKMT-204ENST00000491402 KRTAP9-8Q9BYQ0 159 aa10.27□□□□□ -0.77
VCPKMT-204ENST00000491402 SERP1Q9Y6X1 66 aa10.25□□□□□ -0.77
VCPKMT-204ENST00000491402 MT2AP02795 61 aa10.18□□□□□ -0.78
VCPKMT-204ENST00000491402 H0YAA0 97 aa10.16□□□□□ -0.78
VCPKMT-204ENST00000491402 MT1FP04733 61 aa10.11□□□□□ -0.79
VCPKMT-204ENST00000491402 ADM2Q7Z4H4 148 aa10.11□□□□□ -0.79
VCPKMT-204ENST00000491402 KRTAP10-10P60014 251 aa10.09□□□□□ -0.79
VCPKMT-204ENST00000491402 KRTAP9-2Q9BYQ4 174 aa10.09□□□□□ -0.79
VCPKMT-204ENST00000491402 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
VCPKMT-204ENST00000491402 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
VCPKMT-204ENST00000491402 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
VCPKMT-204ENST00000491402 SVIPQ8NHG7 77 aa10.01□□□□□ -0.81
VCPKMT-204ENST00000491402 P0C880 135 aa10□□□□□ -0.81
VCPKMT-204ENST00000491402 SEC61GP60059 68 aa9.96□□□□□ -0.82
VCPKMT-204ENST00000491402 KRTAP9-3Q9BYQ3 159 aa9.93□□□□□ -0.82
VCPKMT-204ENST00000491402 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
VCPKMT-204ENST00000491402 SMIM26A0A096LP01 95 aa9.91□□□□□ -0.82
VCPKMT-204ENST00000491402 A0A1B0GU69 56 aa9.91□□□□□ -0.82
VCPKMT-204ENST00000491402 CRIPTQ9P021 101 aa9.86□□□□□ -0.83
VCPKMT-204ENST00000491402 Q1T7F1 81 aa9.83□□□□□ -0.84
VCPKMT-204ENST00000491402 V9GYY9 64 aa9.83□□□□□ -0.84
VCPKMT-204ENST00000491402 FSIP2Q5CZC0 6907 aa9.81□□□□□ -0.84
VCPKMT-204ENST00000491402 PRR15LQ9BU68 103 aa9.81□□□□□ -0.84
VCPKMT-204ENST00000491402 R4GN34 69 aa9.79□□□□□ -0.84
VCPKMT-204ENST00000491402 LCE2BO14633 110 aa9.78□□□□□ -0.84
VCPKMT-204ENST00000491402 KRTAP19-1Q8IUB9 90 aa9.78□□□□□ -0.84
VCPKMT-204ENST00000491402 SPRR2GQ9BYE4 73 aa9.77□□□□□ -0.85
VCPKMT-204ENST00000491402 M0QZ58 72 aa9.75□□□□□ -0.85
VCPKMT-204ENST00000491402 USH2AO75445 5202 aa9.75□□□□□ -0.85
VCPKMT-204ENST00000491402 A0A1B0GU33 70 aa9.73□□□□□ -0.85
VCPKMT-204ENST00000491402 PSPHP1O15172 72 aa9.7□□□□□ -0.86
VCPKMT-204ENST00000491402 KRTAP13-4Q3LI77 160 aa9.68□□□□□ -0.86
VCPKMT-204ENST00000491402 CRCT1Q9UGL9 99 aa9.62□□□□□ -0.87
VCPKMT-204ENST00000491402 Q5VV11 94 aa9.6□□□□□ -0.87
VCPKMT-204ENST00000491402 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
VCPKMT-204ENST00000491402 LINC01554Q52M75 96 aa9.58□□□□□ -0.88
VCPKMT-204ENST00000491402 KRTAP19-8Q3LI54 63 aa9.56□□□□□ -0.88
VCPKMT-204ENST00000491402 SSPOA2VEC9 5147 aa9.56□□□□□ -0.88
VCPKMT-204ENST00000491402 KRTAP9-6A0A140TA67 174 aa9.55□□□□□ -0.88
VCPKMT-204ENST00000491402 UQCR11O14957 56 aa9.54□□□□□ -0.88
VCPKMT-204ENST00000491402 MT1BP07438 61 aa9.47□□□□□ -0.89
VCPKMT-204ENST00000491402 A0A0D9SG42 100 aa9.45□□□□□ -0.9
VCPKMT-204ENST00000491402 A8MU10 97 aa9.4□□□□□ -0.9
VCPKMT-204ENST00000491402 A6NED7 52 aa9.4□□□□□ -0.91
VCPKMT-204ENST00000491402 A6NN06 94 aa9.39□□□□□ -0.91
VCPKMT-204ENST00000491402 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
VCPKMT-204ENST00000491402 PLAC4Q8WY50 150 aa9.34□□□□□ -0.91
VCPKMT-204ENST00000491402 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
VCPKMT-204ENST00000491402 KRTAP12-1P59990 96 aa9.27□□□□□ -0.92
VCPKMT-204ENST00000491402 SPINT4Q6UDR6 99 aa9.25□□□□□ -0.93
VCPKMT-204ENST00000491402 FCGBPQ9Y6R7 5405 aaPredicted RBP9.24□□□□□ -0.93
VCPKMT-204ENST00000491402 KRTAP12-2P59991 146 aa9.24□□□□□ -0.93
VCPKMT-204ENST00000491402 CDC42SE1Q9NRR8 79 aa9.17□□□□□ -0.94
VCPKMT-204ENST00000491402 CAMK2N1Q7Z7J9 78 aa9.11□□□□□ -0.95
VCPKMT-204ENST00000491402 MT1XP80297 61 aa9.09□□□□□ -0.95
VCPKMT-204ENST00000491402 KRTAP10-5P60370 271 aa9.07□□□□□ -0.96
VCPKMT-204ENST00000491402 K7ERS5 55 aa9.04□□□□□ -0.96
VCPKMT-204ENST00000491402 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
VCPKMT-204ENST00000491402 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
VCPKMT-204ENST00000491402 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.92□□□□□ -0.98
VCPKMT-204ENST00000491402 MACF1Q9UPN3 7388 aaKnown RBP8.86□□□□□ -0.99
VCPKMT-204ENST00000491402 PRO0628Q9UI54 55 aa8.82□□□□□ -1
VCPKMT-204ENST00000491402 C10orf95Q9H7T3 257 aa8.8□□□□□ -1
VCPKMT-204ENST00000491402 SYNE2Q8WXH0 6885 aaKnown RBP8.71□□□□□ -1.01
VCPKMT-204ENST00000491402 KRTAP10-7P60409 375 aaPredicted RBP8.69□□□□□ -1.02
VCPKMT-204ENST00000491402 KRTAP9-7A8MTY7 169 aa8.66□□□□□ -1.02
VCPKMT-204ENST00000491402 KRTAP10-12P60413 245 aa8.62□□□□□ -1.03
VCPKMT-204ENST00000491402 TNP1P09430 55 aa8.6□□□□□ -1.03
VCPKMT-204ENST00000491402 ROMO1P60602 79 aa8.6□□□□□ -1.03
VCPKMT-204ENST00000491402 KMT2DO14686 5537 aa8.55□□□□□ -1.04
VCPKMT-204ENST00000491402 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
VCPKMT-204ENST00000491402 KRTAP25-1Q3LHN0 102 aa8.5□□□□□ -1.05
VCPKMT-204ENST00000491402 PMAIP1Q13794 54 aa8.49□□□□□ -1.05
VCPKMT-204ENST00000491402 KRTAP4-8A0A0G2JLE6 195 aa8.46□□□□□ -1.05
VCPKMT-204ENST00000491402 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.05
VCPKMT-204ENST00000491402 KRTAP8-1Q8IUC2 63 aa8.37□□□□□ -1.07
VCPKMT-204ENST00000491402 KRTAP5-9P26371 169 aa8.33□□□□□ -1.08
VCPKMT-204ENST00000491402 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
VCPKMT-204ENST00000491402 SPRR2FQ96RM1 72 aa8.25□□□□□ -1.09
VCPKMT-204ENST00000491402 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
VCPKMT-204ENST00000491402 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
VCPKMT-204ENST00000491402 KRTAP19-7Q3SYF9 63 aa8.11□□□□□ -1.11
VCPKMT-204ENST00000491402 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
VCPKMT-204ENST00000491402 MDN1Q9NU22 5596 aa8.1□□□□□ -1.11
VCPKMT-204ENST00000491402 KRTAP19-5Q3LI72 72 aa8.1□□□□□ -1.11
VCPKMT-204ENST00000491402 KTN1-AS1Q86SY8 53 aa8.09□□□□□ -1.11
VCPKMT-204ENST00000491402 NEBP20929 6669 aa8.05□□□□□ -1.12
VCPKMT-204ENST00000491402 KRTAP12-3P60328 96 aa7.99□□□□□ -1.13
VCPKMT-204ENST00000491402 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms