RNA–Protein interactions for RNA: ENST00000491215.1

NOTCH4-205, Transcript of notch 4, humanhuman

TSL 3

Gene NOTCH4, Length 1,632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-205ENST00000491215 H1FX-AS1Q4G0G2 97 aa10.74□□□□□ -0.69
NOTCH4-205ENST00000491215 COA5Q86WW8 74 aa10.73□□□□□ -0.69
NOTCH4-205ENST00000491215 DMAC1Q96GE9 116 aa10.73□□□□□ -0.69
NOTCH4-205ENST00000491215 ACYP2P14621 99 aa10.72□□□□□ -0.69
NOTCH4-205ENST00000491215 KRTAP3-1Q9BYR8 98 aa10.68□□□□□ -0.7
NOTCH4-205ENST00000491215 A8MUN3 132 aa10.6□□□□□ -0.71
NOTCH4-205ENST00000491215 KRTAP10-6P60371 365 aaPredicted RBP10.59□□□□□ -0.71
NOTCH4-205ENST00000491215 CHKB-CPT1BH3BT56 60 aa10.56□□□□□ -0.72
NOTCH4-205ENST00000491215 Q1T7F1 81 aa10.55□□□□□ -0.72
NOTCH4-205ENST00000491215 LORP23490 312 aaPredicted RBP10.55□□□□□ -0.72
NOTCH4-205ENST00000491215 S4R3F8 94 aa10.55□□□□□ -0.72
NOTCH4-205ENST00000491215 V9GYY9 64 aa10.54□□□□□ -0.72
NOTCH4-205ENST00000491215 LCA10Q71F78 164 aa10.47□□□□□ -0.73
NOTCH4-205ENST00000491215 CSAG1Q6PB30 78 aa10.38□□□□□ -0.75
NOTCH4-205ENST00000491215 KRTAP9-8Q9BYQ0 159 aa10.38□□□□□ -0.75
NOTCH4-205ENST00000491215 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
NOTCH4-205ENST00000491215 PSPHP1O15172 72 aa10.34□□□□□ -0.75
NOTCH4-205ENST00000491215 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
NOTCH4-205ENST00000491215 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
NOTCH4-205ENST00000491215 MT2AP02795 61 aa10.31□□□□□ -0.76
NOTCH4-205ENST00000491215 PRR15LQ9BU68 103 aa10.31□□□□□ -0.76
NOTCH4-205ENST00000491215 KRTAP10-10P60014 251 aa10.25□□□□□ -0.77
NOTCH4-205ENST00000491215 MT1FP04733 61 aa10.24□□□□□ -0.77
NOTCH4-205ENST00000491215 Q5VV11 94 aa10.22□□□□□ -0.77
NOTCH4-205ENST00000491215 KRTAP9-2Q9BYQ4 174 aa10.18□□□□□ -0.78
NOTCH4-205ENST00000491215 A0A1B0GU69 56 aa10.17□□□□□ -0.78
NOTCH4-205ENST00000491215 LCE2DQ5TA82 110 aaPredicted RBP10.13□□□□□ -0.79
NOTCH4-205ENST00000491215 SEC61GP60059 68 aa10.1□□□□□ -0.79
NOTCH4-205ENST00000491215 BRK1Q8WUW1 75 aa10.05□□□□□ -0.8
NOTCH4-205ENST00000491215 A6NED7 52 aa10.04□□□□□ -0.8
NOTCH4-205ENST00000491215 H0YAA0 97 aa10.03□□□□□ -0.8
NOTCH4-205ENST00000491215 KRTAP9-3Q9BYQ3 159 aa10.03□□□□□ -0.8
NOTCH4-205ENST00000491215 ADM2Q7Z4H4 148 aa9.99□□□□□ -0.81
NOTCH4-205ENST00000491215 PRO0628Q9UI54 55 aa9.93□□□□□ -0.82
NOTCH4-205ENST00000491215 UQCR11O14957 56 aa9.9□□□□□ -0.82
NOTCH4-205ENST00000491215 CDC42SE1Q9NRR8 79 aa9.89□□□□□ -0.83
NOTCH4-205ENST00000491215 LCE2BO14633 110 aa9.86□□□□□ -0.83
NOTCH4-205ENST00000491215 CRIPTQ9P021 101 aa9.85□□□□□ -0.83
NOTCH4-205ENST00000491215 FSIP2Q5CZC0 6907 aa9.83□□□□□ -0.84
NOTCH4-205ENST00000491215 P0C880 135 aa9.83□□□□□ -0.84
NOTCH4-205ENST00000491215 A0A1B0GU33 70 aa9.81□□□□□ -0.84
NOTCH4-205ENST00000491215 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
NOTCH4-205ENST00000491215 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
NOTCH4-205ENST00000491215 MIR22HGQ0VDD5 57 aa9.79□□□□□ -0.84
NOTCH4-205ENST00000491215 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
NOTCH4-205ENST00000491215 A8MU10 97 aa9.78□□□□□ -0.84
NOTCH4-205ENST00000491215 SPRR2GQ9BYE4 73 aa9.78□□□□□ -0.84
NOTCH4-205ENST00000491215 USH2AO75445 5202 aa9.77□□□□□ -0.85
NOTCH4-205ENST00000491215 R4GN34 69 aa9.71□□□□□ -0.85
NOTCH4-205ENST00000491215 KRTAP9-6A0A140TA67 174 aa9.69□□□□□ -0.86
NOTCH4-205ENST00000491215 M0QZ58 72 aa9.66□□□□□ -0.86
NOTCH4-205ENST00000491215 CRCT1Q9UGL9 99 aa9.66□□□□□ -0.86
NOTCH4-205ENST00000491215 KRTAP19-8Q3LI54 63 aa9.6□□□□□ -0.87
NOTCH4-205ENST00000491215 SSPOA2VEC9 5147 aa9.56□□□□□ -0.88
NOTCH4-205ENST00000491215 MT1BP07438 61 aa9.53□□□□□ -0.88
NOTCH4-205ENST00000491215 PMAIP1Q13794 54 aa9.53□□□□□ -0.88
NOTCH4-205ENST00000491215 LINC01554Q52M75 96 aa9.52□□□□□ -0.89
NOTCH4-205ENST00000491215 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
NOTCH4-205ENST00000491215 SVIPQ8NHG7 77 aa9.45□□□□□ -0.9
NOTCH4-205ENST00000491215 KRTAP19-6Q3LI70 58 aa9.42□□□□□ -0.9
NOTCH4-205ENST00000491215 A6NN06 94 aa9.41□□□□□ -0.9
NOTCH4-205ENST00000491215 A0A0D9SG42 100 aa9.37□□□□□ -0.91
NOTCH4-205ENST00000491215 K7ERS5 55 aa9.37□□□□□ -0.91
NOTCH4-205ENST00000491215 PLAC4Q8WY50 150 aa9.37□□□□□ -0.91
NOTCH4-205ENST00000491215 FCGBPQ9Y6R7 5405 aaPredicted RBP9.28□□□□□ -0.92
NOTCH4-205ENST00000491215 KRTAP10-5P60370 271 aa9.2□□□□□ -0.94
NOTCH4-205ENST00000491215 KTN1-AS1Q86SY8 53 aa9.16□□□□□ -0.94
NOTCH4-205ENST00000491215 KRTAP12-1P59990 96 aa9.16□□□□□ -0.94
NOTCH4-205ENST00000491215 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.94
NOTCH4-205ENST00000491215 KRTAP12-2P59991 146 aa9.13□□□□□ -0.95
NOTCH4-205ENST00000491215 PRO2289Q9P1D8 64 aa9.13□□□□□ -0.95
NOTCH4-205ENST00000491215 MT1XP80297 61 aa9.09□□□□□ -0.95
NOTCH4-205ENST00000491215 CAMK2N1Q7Z7J9 78 aa9.03□□□□□ -0.96
NOTCH4-205ENST00000491215 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.99□□□□□ -0.97
NOTCH4-205ENST00000491215 ROMO1P60602 79 aa8.97□□□□□ -0.97
NOTCH4-205ENST00000491215 MACF1Q9UPN3 7388 aaKnown RBP8.92□□□□□ -0.98
NOTCH4-205ENST00000491215 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
NOTCH4-205ENST00000491215 KRTAP9-7A8MTY7 169 aa8.76□□□□□ -1.01
NOTCH4-205ENST00000491215 SYNE2Q8WXH0 6885 aaKnown RBP8.75□□□□□ -1.01
NOTCH4-205ENST00000491215 KRTAP10-7P60409 375 aaPredicted RBP8.71□□□□□ -1.02
NOTCH4-205ENST00000491215 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.03
NOTCH4-205ENST00000491215 KRTAP25-1Q3LHN0 102 aa8.64□□□□□ -1.03
NOTCH4-205ENST00000491215 KMT2DO14686 5537 aa8.63□□□□□ -1.03
NOTCH4-205ENST00000491215 KRTAP10-12P60413 245 aa8.63□□□□□ -1.03
NOTCH4-205ENST00000491215 KRTAP6-3Q3LI67 103 aa8.54□□□□□ -1.04
NOTCH4-205ENST00000491215 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
NOTCH4-205ENST00000491215 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
NOTCH4-205ENST00000491215 KRTAP8-1Q8IUC2 63 aa8.51□□□□□ -1.05
NOTCH4-205ENST00000491215 TNP1P09430 55 aa8.45□□□□□ -1.06
NOTCH4-205ENST00000491215 KRTAP5-9P26371 169 aa8.4□□□□□ -1.06
NOTCH4-205ENST00000491215 SPRR2FQ96RM1 72 aa8.35□□□□□ -1.07
NOTCH4-205ENST00000491215 MUC12Q9UKN1 5478 aa8.3□□□□□ -1.08
NOTCH4-205ENST00000491215 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
NOTCH4-205ENST00000491215 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.1
NOTCH4-205ENST00000491215 LCE3AQ5TA76 89 aa8.21□□□□□ -1.1
NOTCH4-205ENST00000491215 MDN1Q9NU22 5596 aa8.17□□□□□ -1.1
NOTCH4-205ENST00000491215 NEBP20929 6669 aa8.12□□□□□ -1.11
NOTCH4-205ENST00000491215 KRTAP19-7Q3SYF9 63 aa8.11□□□□□ -1.11
NOTCH4-205ENST00000491215 KRTAP19-5Q3LI72 72 aa8.09□□□□□ -1.11
NOTCH4-205ENST00000491215 SPRR2EP22531 72 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms