RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
ECM1-205ENST00000490346 LCE2BO14633 110 aa4.29□□□□□ -1.72
ECM1-205ENST00000490346 TRAV7A0A075B6U4 112 aa4.27□□□□□ -1.73
ECM1-205ENST00000490346 A8MUN3 132 aa4.26□□□□□ -1.73
ECM1-205ENST00000490346 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
ECM1-205ENST00000490346 NDUFC1O43677 76 aa4.23□□□□□ -1.73
ECM1-205ENST00000490346 USH2AO75445 5202 aa4.22□□□□□ -1.73
ECM1-205ENST00000490346 DMAC1Q96GE9 116 aa4.21□□□□□ -1.74
ECM1-205ENST00000490346 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
ECM1-205ENST00000490346 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
ECM1-205ENST00000490346 SERP2Q8N6R1 65 aa4.17□□□□□ -1.74
ECM1-205ENST00000490346 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
ECM1-205ENST00000490346 C20orf197Q8N268 126 aa4.15□□□□□ -1.75
ECM1-205ENST00000490346 H0YAA0 97 aa4.14□□□□□ -1.75
ECM1-205ENST00000490346 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
ECM1-205ENST00000490346 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
ECM1-205ENST00000490346 ACYP2P14621 99 aa4.12□□□□□ -1.75
ECM1-205ENST00000490346 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
ECM1-205ENST00000490346 CRIPTQ9P021 101 aa4.1□□□□□ -1.75
ECM1-205ENST00000490346 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
ECM1-205ENST00000490346 MT1BP07438 61 aa4.08□□□□□ -1.76
ECM1-205ENST00000490346 COX7CP15954 63 aa4.08□□□□□ -1.76
ECM1-205ENST00000490346 Q5VV11 94 aa4.08□□□□□ -1.76
ECM1-205ENST00000490346 SPANXA2-OT1Q8N9U9 137 aa4.08□□□□□ -1.76
ECM1-205ENST00000490346 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
ECM1-205ENST00000490346 P0C880 135 aa4.05□□□□□ -1.76
ECM1-205ENST00000490346 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
ECM1-205ENST00000490346 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
ECM1-205ENST00000490346 SPTSSBQ8NFR3 76 aa4.04□□□□□ -1.76
ECM1-205ENST00000490346 ANAPC13Q9BS18 74 aa4.02□□□□□ -1.77
ECM1-205ENST00000490346 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
ECM1-205ENST00000490346 H7BZZ5 65 aa4□□□□□ -1.77
ECM1-205ENST00000490346 R4GN34 69 aa4□□□□□ -1.77
ECM1-205ENST00000490346 M0QZ58 72 aa3.98□□□□□ -1.77
ECM1-205ENST00000490346 COA5Q86WW8 74 aa3.98□□□□□ -1.77
ECM1-205ENST00000490346 A6NN06 94 aa3.97□□□□□ -1.77
ECM1-205ENST00000490346 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
ECM1-205ENST00000490346 CCDC179H3BU77 68 aa3.94□□□□□ -1.78
ECM1-205ENST00000490346 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
ECM1-205ENST00000490346 LINC01554Q52M75 96 aa3.93□□□□□ -1.78
ECM1-205ENST00000490346 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
ECM1-205ENST00000490346 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
ECM1-205ENST00000490346 MT1XP80297 61 aa3.86□□□□□ -1.79
ECM1-205ENST00000490346 SEC61GP60059 68 aa3.85□□□□□ -1.79
ECM1-205ENST00000490346 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
ECM1-205ENST00000490346 KRTAP13-4Q3LI77 160 aa3.84□□□□□ -1.79
ECM1-205ENST00000490346 SERP1Q9Y6X1 66 aa3.84□□□□□ -1.79
ECM1-205ENST00000490346 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
ECM1-205ENST00000490346 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
ECM1-205ENST00000490346 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
ECM1-205ENST00000490346 TMEM258P61165 79 aa3.78□□□□□ -1.8
ECM1-205ENST00000490346 A0A1B0GU33 70 aa3.77□□□□□ -1.81
ECM1-205ENST00000490346 A0A1B0GU69 56 aa3.77□□□□□ -1.81
ECM1-205ENST00000490346 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
ECM1-205ENST00000490346 A0A0D9SG42 100 aa3.74□□□□□ -1.81
ECM1-205ENST00000490346 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
ECM1-205ENST00000490346 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
ECM1-205ENST00000490346 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
ECM1-205ENST00000490346 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
ECM1-205ENST00000490346 PRR15LQ9BU68 103 aa3.68□□□□□ -1.82
ECM1-205ENST00000490346 LINC01558Q9Y6Z2 57 aa3.68□□□□□ -1.82
ECM1-205ENST00000490346 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
ECM1-205ENST00000490346 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
ECM1-205ENST00000490346 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
ECM1-205ENST00000490346 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
ECM1-205ENST00000490346 KRTAP4-8Q9BYQ9 185 aa3.66□□□□□ -1.82
ECM1-205ENST00000490346 A8MU10 97 aa3.65□□□□□ -1.83
ECM1-205ENST00000490346 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
ECM1-205ENST00000490346 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
ECM1-205ENST00000490346 KMT2DO14686 5537 aa3.64□□□□□ -1.83
ECM1-205ENST00000490346 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
ECM1-205ENST00000490346 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
ECM1-205ENST00000490346 UQCR11O14957 56 aa3.57□□□□□ -1.84
ECM1-205ENST00000490346 PCP4P48539 62 aa3.57□□□□□ -1.84
ECM1-205ENST00000490346 NEBP20929 6669 aa3.56□□□□□ -1.84
ECM1-205ENST00000490346 V9GYY9 64 aa3.55□□□□□ -1.84
ECM1-205ENST00000490346 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
ECM1-205ENST00000490346 SPRR2EP22531 72 aa3.54□□□□□ -1.84
ECM1-205ENST00000490346 SPRR2BP35325 72 aa3.54□□□□□ -1.84
ECM1-205ENST00000490346 SPRR2AP35326 72 aa3.54□□□□□ -1.84
ECM1-205ENST00000490346 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
ECM1-205ENST00000490346 PSPHP1O15172 72 aa3.53□□□□□ -1.84
ECM1-205ENST00000490346 Q1T7F1 81 aa3.53□□□□□ -1.84
ECM1-205ENST00000490346 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
ECM1-205ENST00000490346 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
ECM1-205ENST00000490346 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
ECM1-205ENST00000490346 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
ECM1-205ENST00000490346 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
ECM1-205ENST00000490346 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
ECM1-205ENST00000490346 TNP1P09430 55 aa3.45□□□□□ -1.86
ECM1-205ENST00000490346 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
ECM1-205ENST00000490346 SPRR2DP22532 72 aa3.42□□□□□ -1.86
ECM1-205ENST00000490346 A6NED7 52 aa3.41□□□□□ -1.86
ECM1-205ENST00000490346 K7ERS5 55 aa3.41□□□□□ -1.86
ECM1-205ENST00000490346 MT1EP04732 61 aa3.4□□□□□ -1.87
ECM1-205ENST00000490346 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
ECM1-205ENST00000490346 KRTAP19-5Q3LI72 72 aa3.4□□□□□ -1.87
ECM1-205ENST00000490346 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
ECM1-205ENST00000490346 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
ECM1-205ENST00000490346 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms