RNA–Protein interactions for RNA: ENST00000489548.1

PHACTR1-210, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 5

Gene PHACTR1, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-210ENST00000489548 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
PHACTR1-210ENST00000489548 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
PHACTR1-210ENST00000489548 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
PHACTR1-210ENST00000489548 SPTSSBQ8NFR3 76 aa5.06□□□□□ -1.6
PHACTR1-210ENST00000489548 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
PHACTR1-210ENST00000489548 C9orf92A6NGG3 77 aa5.05□□□□□ -1.6
PHACTR1-210ENST00000489548 PSPHP1O15172 72 aa5.05□□□□□ -1.6
PHACTR1-210ENST00000489548 LCE2CQ5TA81 110 aa5.05□□□□□ -1.6
PHACTR1-210ENST00000489548 Q5VV11 94 aa5.03□□□□□ -1.6
PHACTR1-210ENST00000489548 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
PHACTR1-210ENST00000489548 BRK1Q8WUW1 75 aa5.03□□□□□ -1.6
PHACTR1-210ENST00000489548 SPINK7P58062 85 aa5□□□□□ -1.61
PHACTR1-210ENST00000489548 MT1HP80294 61 aa4.99□□□□□ -1.61
PHACTR1-210ENST00000489548 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
PHACTR1-210ENST00000489548 XP32Q5T750 250 aa4.99□□□□□ -1.61
PHACTR1-210ENST00000489548 RPL37P61927 97 aaKnown RBP4.98□□□□□ -1.61
PHACTR1-210ENST00000489548 A6NED7 52 aa4.96□□□□□ -1.62
PHACTR1-210ENST00000489548 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
PHACTR1-210ENST00000489548 A0A1B0GU69 56 aa4.95□□□□□ -1.62
PHACTR1-210ENST00000489548 SEC61GP60059 68 aa4.95□□□□□ -1.62
PHACTR1-210ENST00000489548 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
PHACTR1-210ENST00000489548 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
PHACTR1-210ENST00000489548 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
PHACTR1-210ENST00000489548 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
PHACTR1-210ENST00000489548 M0R2T5 61 aa4.88□□□□□ -1.63
PHACTR1-210ENST00000489548 UQCR11O14957 56 aa4.88□□□□□ -1.63
PHACTR1-210ENST00000489548 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
PHACTR1-210ENST00000489548 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
PHACTR1-210ENST00000489548 LCA10Q71F78 164 aa4.85□□□□□ -1.63
PHACTR1-210ENST00000489548 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
PHACTR1-210ENST00000489548 FLGP20930 4061 aaPredicted RBP4.81□□□□□ -1.64
PHACTR1-210ENST00000489548 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
PHACTR1-210ENST00000489548 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
PHACTR1-210ENST00000489548 RBM12B-AS1Q9P1G2 102 aa4.78□□□□□ -1.64
PHACTR1-210ENST00000489548 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
PHACTR1-210ENST00000489548 H1FX-AS1Q4G0G2 97 aa4.77□□□□□ -1.65
PHACTR1-210ENST00000489548 USH2AO75445 5202 aa4.76□□□□□ -1.65
PHACTR1-210ENST00000489548 S4R3F8 94 aa4.76□□□□□ -1.65
PHACTR1-210ENST00000489548 A0A1B0GU33 70 aa4.75□□□□□ -1.65
PHACTR1-210ENST00000489548 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
PHACTR1-210ENST00000489548 A6NN06 94 aa4.72□□□□□ -1.65
PHACTR1-210ENST00000489548 A8MU10 97 aa4.71□□□□□ -1.66
PHACTR1-210ENST00000489548 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
PHACTR1-210ENST00000489548 KRTAP3-3Q9BYR6 98 aa4.69□□□□□ -1.66
PHACTR1-210ENST00000489548 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
PHACTR1-210ENST00000489548 CSAG1Q6PB30 78 aa4.67□□□□□ -1.66
PHACTR1-210ENST00000489548 K7ERS5 55 aa4.65□□□□□ -1.67
PHACTR1-210ENST00000489548 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
PHACTR1-210ENST00000489548 H0YAA0 97 aa4.63□□□□□ -1.67
PHACTR1-210ENST00000489548 LCE2BO14633 110 aa4.6□□□□□ -1.67
PHACTR1-210ENST00000489548 KRTAP3-2Q9BYR7 98 aa4.59□□□□□ -1.67
PHACTR1-210ENST00000489548 MT2AP02795 61 aa4.58□□□□□ -1.68
PHACTR1-210ENST00000489548 M0QZ58 72 aa4.57□□□□□ -1.68
PHACTR1-210ENST00000489548 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
PHACTR1-210ENST00000489548 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
PHACTR1-210ENST00000489548 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
PHACTR1-210ENST00000489548 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
PHACTR1-210ENST00000489548 MT1FP04733 61 aa4.54□□□□□ -1.68
PHACTR1-210ENST00000489548 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
PHACTR1-210ENST00000489548 P0C880 135 aa4.5□□□□□ -1.69
PHACTR1-210ENST00000489548 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
PHACTR1-210ENST00000489548 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
PHACTR1-210ENST00000489548 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
PHACTR1-210ENST00000489548 A0A0D9SG42 100 aa4.41□□□□□ -1.7
PHACTR1-210ENST00000489548 ROMO1P60602 79 aa4.41□□□□□ -1.7
PHACTR1-210ENST00000489548 R4GN34 69 aa4.41□□□□□ -1.7
PHACTR1-210ENST00000489548 CRIPTQ9P021 101 aa4.39□□□□□ -1.71
PHACTR1-210ENST00000489548 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
PHACTR1-210ENST00000489548 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
PHACTR1-210ENST00000489548 SPINT4Q6UDR6 99 aa4.33□□□□□ -1.72
PHACTR1-210ENST00000489548 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
PHACTR1-210ENST00000489548 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
PHACTR1-210ENST00000489548 NEBP20929 6669 aa4.3□□□□□ -1.72
PHACTR1-210ENST00000489548 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
PHACTR1-210ENST00000489548 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
PHACTR1-210ENST00000489548 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
PHACTR1-210ENST00000489548 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
PHACTR1-210ENST00000489548 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
PHACTR1-210ENST00000489548 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
PHACTR1-210ENST00000489548 KMT2DO14686 5537 aa4.13□□□□□ -1.75
PHACTR1-210ENST00000489548 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
PHACTR1-210ENST00000489548 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
PHACTR1-210ENST00000489548 MT1BP07438 61 aa4.1□□□□□ -1.75
PHACTR1-210ENST00000489548 PLAC4Q8WY50 150 aa4.1□□□□□ -1.75
PHACTR1-210ENST00000489548 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
PHACTR1-210ENST00000489548 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
PHACTR1-210ENST00000489548 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
PHACTR1-210ENST00000489548 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
PHACTR1-210ENST00000489548 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
PHACTR1-210ENST00000489548 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
PHACTR1-210ENST00000489548 TNP1P09430 55 aa4.02□□□□□ -1.77
PHACTR1-210ENST00000489548 SPRR2EP22531 72 aa3.94□□□□□ -1.78
PHACTR1-210ENST00000489548 SPRR2BP35325 72 aa3.94□□□□□ -1.78
PHACTR1-210ENST00000489548 SPRR2AP35326 72 aa3.94□□□□□ -1.78
PHACTR1-210ENST00000489548 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
PHACTR1-210ENST00000489548 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
PHACTR1-210ENST00000489548 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
PHACTR1-210ENST00000489548 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
PHACTR1-210ENST00000489548 PRO2289Q9P1D8 64 aa3.86□□□□□ -1.79
PHACTR1-210ENST00000489548 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms