RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 C20orf197Q8N268 126 aa4.33□□□□□ -1.72
TRAPPC12-221ENST00000489032 NDUFC1O43677 76 aa4.32□□□□□ -1.72
TRAPPC12-221ENST00000489032 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
TRAPPC12-221ENST00000489032 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
TRAPPC12-221ENST00000489032 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
TRAPPC12-221ENST00000489032 LINC00313P59037 77 aa4.31□□□□□ -1.72
TRAPPC12-221ENST00000489032 KLKP1Q107X0 134 aa4.31□□□□□ -1.72
TRAPPC12-221ENST00000489032 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
TRAPPC12-221ENST00000489032 MUC17Q685J3 4493 aa4.31□□□□□ -1.72
TRAPPC12-221ENST00000489032 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
TRAPPC12-221ENST00000489032 C8orf87E5RJ46 101 aa4.3□□□□□ -1.72
TRAPPC12-221ENST00000489032 TMEM254Q8TBM7 123 aa4.3□□□□□ -1.72
TRAPPC12-221ENST00000489032 TP53AIP1Q9HCN2 124 aa4.3□□□□□ -1.72
TRAPPC12-221ENST00000489032 MP68P56378 58 aa4.29□□□□□ -1.72
TRAPPC12-221ENST00000489032 TMEM258P61165 79 aa4.29□□□□□ -1.72
TRAPPC12-221ENST00000489032 RPL37P61927 97 aaKnown RBP4.29□□□□□ -1.72
TRAPPC12-221ENST00000489032 H3BPC8 53 aa4.28□□□□□ -1.72
TRAPPC12-221ENST00000489032 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
TRAPPC12-221ENST00000489032 PCOTHQ58A44 107 aa4.27□□□□□ -1.73
TRAPPC12-221ENST00000489032 MRPL34Q9BQ48 92 aaKnown RBP4.27□□□□□ -1.73
TRAPPC12-221ENST00000489032 SNURFQ9Y675 71 aa4.26□□□□□ -1.73
TRAPPC12-221ENST00000489032 NDUFS5O43920 106 aa4.25□□□□□ -1.73
TRAPPC12-221ENST00000489032 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
TRAPPC12-221ENST00000489032 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
TRAPPC12-221ENST00000489032 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC12-221ENST00000489032 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
TRAPPC12-221ENST00000489032 A8MUU9 505 aa4.24□□□□□ -1.73
TRAPPC12-221ENST00000489032 H0Y9P7 68 aa4.24□□□□□ -1.73
TRAPPC12-221ENST00000489032 H7BZZ5 65 aa4.24□□□□□ -1.73
TRAPPC12-221ENST00000489032 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC12-221ENST00000489032 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
TRAPPC12-221ENST00000489032 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
TRAPPC12-221ENST00000489032 FAM236DA0A1B0GTK5 79 aa4.22□□□□□ -1.73
TRAPPC12-221ENST00000489032 FAM236CP0DP71 79 aa4.22□□□□□ -1.73
TRAPPC12-221ENST00000489032 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
TRAPPC12-221ENST00000489032 ZCCHC13Q8WW36 166 aaKnown RBP4.21□□□□□ -1.74
TRAPPC12-221ENST00000489032 LINC00208Q96KT6 92 aa4.21□□□□□ -1.74
TRAPPC12-221ENST00000489032 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
TRAPPC12-221ENST00000489032 MT1HP80294 61 aa4.2□□□□□ -1.74
TRAPPC12-221ENST00000489032 C1orf64Q8NEQ6 169 aa4.2□□□□□ -1.74
TRAPPC12-221ENST00000489032 LOC101927531A0A1B0GV80 90 aa4.17□□□□□ -1.74
TRAPPC12-221ENST00000489032 SERP1Q9Y6X1 66 aa4.17□□□□□ -1.74
TRAPPC12-221ENST00000489032 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
TRAPPC12-221ENST00000489032 M0R2T5 61 aa4.13□□□□□ -1.75
TRAPPC12-221ENST00000489032 KRTAP19-2Q3LHN2 52 aa4.13□□□□□ -1.75
TRAPPC12-221ENST00000489032 COX6B2Q6YFQ2 88 aa4.13□□□□□ -1.75
TRAPPC12-221ENST00000489032 Q5W150 140 aa4.12□□□□□ -1.75
TRAPPC12-221ENST00000489032 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
TRAPPC12-221ENST00000489032 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
TRAPPC12-221ENST00000489032 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
TRAPPC12-221ENST00000489032 USH2AO75445 5202 aa4.1□□□□□ -1.75
TRAPPC12-221ENST00000489032 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC12-221ENST00000489032 RBM12B-AS1Q9P1G2 102 aa4.09□□□□□ -1.75
TRAPPC12-221ENST00000489032 SPINK7P58062 85 aa4.08□□□□□ -1.76
TRAPPC12-221ENST00000489032 SMIM26A0A096LP01 95 aa4.07□□□□□ -1.76
TRAPPC12-221ENST00000489032 SEC61GP60059 68 aa4.07□□□□□ -1.76
TRAPPC12-221ENST00000489032 C7orf65Q6ZTY9 151 aa4.05□□□□□ -1.76
TRAPPC12-221ENST00000489032 HRES1P13985 223 aa4.04□□□□□ -1.76
TRAPPC12-221ENST00000489032 ACYP2P14621 99 aa4.02□□□□□ -1.77
TRAPPC12-221ENST00000489032 COA5Q86WW8 74 aa4□□□□□ -1.77
TRAPPC12-221ENST00000489032 DMAC1Q96GE9 116 aa4□□□□□ -1.77
TRAPPC12-221ENST00000489032 V9GYY9 64 aa4□□□□□ -1.77
TRAPPC12-221ENST00000489032 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
TRAPPC12-221ENST00000489032 A8MUN3 132 aa3.98□□□□□ -1.77
TRAPPC12-221ENST00000489032 CHKB-CPT1BH3BT56 60 aa3.97□□□□□ -1.77
TRAPPC12-221ENST00000489032 Q1T7F1 81 aa3.96□□□□□ -1.78
TRAPPC12-221ENST00000489032 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
TRAPPC12-221ENST00000489032 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
TRAPPC12-221ENST00000489032 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
TRAPPC12-221ENST00000489032 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
TRAPPC12-221ENST00000489032 C4orf26Q17RF5 130 aa3.92□□□□□ -1.78
TRAPPC12-221ENST00000489032 SPTSSBQ8NFR3 76 aa3.91□□□□□ -1.78
TRAPPC12-221ENST00000489032 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
TRAPPC12-221ENST00000489032 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
TRAPPC12-221ENST00000489032 PSPHP1O15172 72 aa3.86□□□□□ -1.79
TRAPPC12-221ENST00000489032 PRR15LQ9BU68 103 aa3.86□□□□□ -1.79
TRAPPC12-221ENST00000489032 S4R3F8 94 aa3.84□□□□□ -1.79
TRAPPC12-221ENST00000489032 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
TRAPPC12-221ENST00000489032 A0A1B0GU69 56 aa3.82□□□□□ -1.8
TRAPPC12-221ENST00000489032 Q5VV11 94 aa3.81□□□□□ -1.8
TRAPPC12-221ENST00000489032 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
TRAPPC12-221ENST00000489032 NEBP20929 6669 aa3.8□□□□□ -1.8
TRAPPC12-221ENST00000489032 MT2AP02795 61 aa3.79□□□□□ -1.8
TRAPPC12-221ENST00000489032 KRTAP10-10P60014 251 aa3.79□□□□□ -1.8
TRAPPC12-221ENST00000489032 LCA10Q71F78 164 aa3.78□□□□□ -1.8
TRAPPC12-221ENST00000489032 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
TRAPPC12-221ENST00000489032 A6NED7 52 aa3.77□□□□□ -1.81
TRAPPC12-221ENST00000489032 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
TRAPPC12-221ENST00000489032 MT1FP04733 61 aa3.76□□□□□ -1.81
TRAPPC12-221ENST00000489032 PRO0628Q9UI54 55 aa3.76□□□□□ -1.81
TRAPPC12-221ENST00000489032 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
TRAPPC12-221ENST00000489032 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
TRAPPC12-221ENST00000489032 UQCR11O14957 56 aa3.72□□□□□ -1.81
TRAPPC12-221ENST00000489032 CDC42SE1Q9NRR8 79 aa3.72□□□□□ -1.81
TRAPPC12-221ENST00000489032 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
TRAPPC12-221ENST00000489032 A0A1B0GU33 70 aa3.67□□□□□ -1.82
TRAPPC12-221ENST00000489032 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
TRAPPC12-221ENST00000489032 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
TRAPPC12-221ENST00000489032 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
TRAPPC12-221ENST00000489032 H0YAA0 97 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms