RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
USP11-209ENST00000488848 FSIP2Q5CZC0 6907 aa5.42□□□□□ -1.54
USP11-209ENST00000488848 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
USP11-209ENST00000488848 C4orf26Q17RF5 130 aa5.39□□□□□ -1.55
USP11-209ENST00000488848 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
USP11-209ENST00000488848 FAM236DA0A1B0GTK5 79 aa5.36□□□□□ -1.55
USP11-209ENST00000488848 FAM236CP0DP71 79 aa5.36□□□□□ -1.55
USP11-209ENST00000488848 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
USP11-209ENST00000488848 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
USP11-209ENST00000488848 ACYP2P14621 99 aa5.32□□□□□ -1.56
USP11-209ENST00000488848 COA5Q86WW8 74 aa5.25□□□□□ -1.57
USP11-209ENST00000488848 SERP1Q9Y6X1 66 aa5.24□□□□□ -1.57
USP11-209ENST00000488848 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
USP11-209ENST00000488848 S4R3F8 94 aa5.23□□□□□ -1.57
USP11-209ENST00000488848 LCA10Q71F78 164 aa5.21□□□□□ -1.58
USP11-209ENST00000488848 MT1HP80294 61 aa5.2□□□□□ -1.58
USP11-209ENST00000488848 SPTSSBQ8NFR3 76 aa5.17□□□□□ -1.58
USP11-209ENST00000488848 CHKB-CPT1BH3BT56 60 aa5.16□□□□□ -1.58
USP11-209ENST00000488848 H0YAA0 97 aa5.15□□□□□ -1.59
USP11-209ENST00000488848 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
USP11-209ENST00000488848 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
USP11-209ENST00000488848 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
USP11-209ENST00000488848 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
USP11-209ENST00000488848 SMIM26A0A096LP01 95 aa5.08□□□□□ -1.6
USP11-209ENST00000488848 Q1T7F1 81 aa5.05□□□□□ -1.6
USP11-209ENST00000488848 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
USP11-209ENST00000488848 V9GYY9 64 aa5.04□□□□□ -1.6
USP11-209ENST00000488848 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
USP11-209ENST00000488848 M0R2T5 61 aa5.01□□□□□ -1.61
USP11-209ENST00000488848 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
USP11-209ENST00000488848 MT2AP02795 61 aa4.97□□□□□ -1.61
USP11-209ENST00000488848 SEC61GP60059 68 aa4.95□□□□□ -1.62
USP11-209ENST00000488848 ADM2Q7Z4H4 148 aa4.95□□□□□ -1.62
USP11-209ENST00000488848 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
USP11-209ENST00000488848 A0A1B0GU69 56 aa4.94□□□□□ -1.62
USP11-209ENST00000488848 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
USP11-209ENST00000488848 H3BS24 57 aa4.93□□□□□ -1.62
USP11-209ENST00000488848 MT1FP04733 61 aa4.92□□□□□ -1.62
USP11-209ENST00000488848 P0C880 135 aa4.92□□□□□ -1.62
USP11-209ENST00000488848 Q5VV11 94 aa4.88□□□□□ -1.63
USP11-209ENST00000488848 M0QZ58 72 aa4.87□□□□□ -1.63
USP11-209ENST00000488848 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
USP11-209ENST00000488848 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
USP11-209ENST00000488848 A0A1B0GU33 70 aa4.85□□□□□ -1.63
USP11-209ENST00000488848 KRTAP10-10P60014 251 aa4.84□□□□□ -1.63
USP11-209ENST00000488848 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.63
USP11-209ENST00000488848 PSPHP1O15172 72 aa4.83□□□□□ -1.64
USP11-209ENST00000488848 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
USP11-209ENST00000488848 UQCR11O14957 56 aa4.81□□□□□ -1.64
USP11-209ENST00000488848 KRTAP13-4Q3LI77 160 aa4.8□□□□□ -1.64
USP11-209ENST00000488848 R4GN34 69 aa4.8□□□□□ -1.64
USP11-209ENST00000488848 A6NN06 94 aa4.78□□□□□ -1.64
USP11-209ENST00000488848 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
USP11-209ENST00000488848 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
USP11-209ENST00000488848 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
USP11-209ENST00000488848 USH2AO75445 5202 aa4.75□□□□□ -1.65
USP11-209ENST00000488848 A6NED7 52 aa4.71□□□□□ -1.66
USP11-209ENST00000488848 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
USP11-209ENST00000488848 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
USP11-209ENST00000488848 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
USP11-209ENST00000488848 MT1BP07438 61 aa4.66□□□□□ -1.66
USP11-209ENST00000488848 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
USP11-209ENST00000488848 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
USP11-209ENST00000488848 NEBP20929 6669 aa4.66□□□□□ -1.66
USP11-209ENST00000488848 A8MU10 97 aa4.63□□□□□ -1.67
USP11-209ENST00000488848 KRTAP12-1P59990 96 aa4.63□□□□□ -1.67
USP11-209ENST00000488848 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
USP11-209ENST00000488848 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
USP11-209ENST00000488848 A0A0D9SG42 100 aa4.59□□□□□ -1.67
USP11-209ENST00000488848 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
USP11-209ENST00000488848 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
USP11-209ENST00000488848 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
USP11-209ENST00000488848 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
USP11-209ENST00000488848 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
USP11-209ENST00000488848 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
USP11-209ENST00000488848 K7ERS5 55 aa4.52□□□□□ -1.69
USP11-209ENST00000488848 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
USP11-209ENST00000488848 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
USP11-209ENST00000488848 GPR98Q8WXG9 6306 aa4.5□□□□□ -1.69
USP11-209ENST00000488848 MT1XP80297 61 aa4.48□□□□□ -1.69
USP11-209ENST00000488848 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
USP11-209ENST00000488848 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
USP11-209ENST00000488848 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
USP11-209ENST00000488848 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
USP11-209ENST00000488848 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
USP11-209ENST00000488848 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
USP11-209ENST00000488848 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
USP11-209ENST00000488848 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
USP11-209ENST00000488848 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
USP11-209ENST00000488848 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
USP11-209ENST00000488848 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
USP11-209ENST00000488848 ROMO1P60602 79 aa4.33□□□□□ -1.72
USP11-209ENST00000488848 KMT2DO14686 5537 aa4.33□□□□□ -1.72
USP11-209ENST00000488848 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
USP11-209ENST00000488848 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
USP11-209ENST00000488848 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
USP11-209ENST00000488848 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
USP11-209ENST00000488848 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
USP11-209ENST00000488848 TNP1P09430 55 aa4.26□□□□□ -1.73
USP11-209ENST00000488848 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms