RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
NECTIN3-209ENST00000488016 KRTAP13-3Q3SY46 172 aa4.32□□□□□ -1.72
NECTIN3-209ENST00000488016 Q5XG85 94 aa4.32□□□□□ -1.72
NECTIN3-209ENST00000488016 FP248Q71RG6 208 aaPredicted RBP4.31□□□□□ -1.72
NECTIN3-209ENST00000488016 C9orf92A6NGG3 77 aa4.3□□□□□ -1.72
NECTIN3-209ENST00000488016 CD164Q04900 197 aa4.3□□□□□ -1.72
NECTIN3-209ENST00000488016 C4orf26Q17RF5 130 aa4.3□□□□□ -1.72
NECTIN3-209ENST00000488016 LIMD2Q9BT23 127 aa4.29□□□□□ -1.72
NECTIN3-209ENST00000488016 C1orf195Q5TG92 126 aa4.28□□□□□ -1.72
NECTIN3-209ENST00000488016 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
NECTIN3-209ENST00000488016 TRAV22A0A0B4J277 110 aa4.27□□□□□ -1.73
NECTIN3-209ENST00000488016 H0Y9P7 68 aa4.27□□□□□ -1.73
NECTIN3-209ENST00000488016 Q1T7F1 81 aa4.27□□□□□ -1.73
NECTIN3-209ENST00000488016 LINC00208Q96KT6 92 aa4.27□□□□□ -1.73
NECTIN3-209ENST00000488016 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
NECTIN3-209ENST00000488016 DEFB116Q30KQ4 102 aa4.26□□□□□ -1.73
NECTIN3-209ENST00000488016 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
NECTIN3-209ENST00000488016 ASB16-AS1Q495Z4 193 aa4.25□□□□□ -1.73
NECTIN3-209ENST00000488016 C1orf64Q8NEQ6 169 aa4.25□□□□□ -1.73
NECTIN3-209ENST00000488016 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
NECTIN3-209ENST00000488016 C8orf87E5RJ46 101 aa4.23□□□□□ -1.73
NECTIN3-209ENST00000488016 C8orf17Q9NRJ1 99 aa4.23□□□□□ -1.73
NECTIN3-209ENST00000488016 MMP24-AS1A0A0U1RRL7 71 aa4.22□□□□□ -1.73
NECTIN3-209ENST00000488016 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
NECTIN3-209ENST00000488016 Q96NJ1 140 aa4.21□□□□□ -1.74
NECTIN3-209ENST00000488016 PCOTHQ58A44 107 aa4.19□□□□□ -1.74
NECTIN3-209ENST00000488016 LOC101927531A0A1B0GV80 90 aa4.18□□□□□ -1.74
NECTIN3-209ENST00000488016 IGHV6-1A0A0B4J1U7 121 aa4.17□□□□□ -1.74
NECTIN3-209ENST00000488016 NDUFS5O43920 106 aa4.17□□□□□ -1.74
NECTIN3-209ENST00000488016 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
NECTIN3-209ENST00000488016 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
NECTIN3-209ENST00000488016 LINC00313P59037 77 aa4.15□□□□□ -1.75
NECTIN3-209ENST00000488016 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
NECTIN3-209ENST00000488016 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
NECTIN3-209ENST00000488016 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
NECTIN3-209ENST00000488016 ACYP2P14621 99 aa4.13□□□□□ -1.75
NECTIN3-209ENST00000488016 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
NECTIN3-209ENST00000488016 COA5Q86WW8 74 aa4.11□□□□□ -1.75
NECTIN3-209ENST00000488016 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
NECTIN3-209ENST00000488016 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
NECTIN3-209ENST00000488016 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
NECTIN3-209ENST00000488016 A8MUN3 132 aa4.07□□□□□ -1.76
NECTIN3-209ENST00000488016 A8MUU9 505 aa4.07□□□□□ -1.76
NECTIN3-209ENST00000488016 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
NECTIN3-209ENST00000488016 PSPHP1O15172 72 aa4.07□□□□□ -1.76
NECTIN3-209ENST00000488016 Q75L30 129 aa4.07□□□□□ -1.76
NECTIN3-209ENST00000488016 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
NECTIN3-209ENST00000488016 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
NECTIN3-209ENST00000488016 KRTAP10-12P60413 245 aa4.05□□□□□ -1.76
NECTIN3-209ENST00000488016 Q5VV11 94 aa4.05□□□□□ -1.76
NECTIN3-209ENST00000488016 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
NECTIN3-209ENST00000488016 HRES1P13985 223 aa4.04□□□□□ -1.76
NECTIN3-209ENST00000488016 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
NECTIN3-209ENST00000488016 Q5W150 140 aa4.03□□□□□ -1.76
NECTIN3-209ENST00000488016 MT1HP80294 61 aa4.02□□□□□ -1.77
NECTIN3-209ENST00000488016 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
NECTIN3-209ENST00000488016 A6NED7 52 aa4.01□□□□□ -1.77
NECTIN3-209ENST00000488016 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
NECTIN3-209ENST00000488016 PMAIP1Q13794 54 aa4□□□□□ -1.77
NECTIN3-209ENST00000488016 SPTSSBQ8NFR3 76 aa3.99□□□□□ -1.77
NECTIN3-209ENST00000488016 COX6B2Q6YFQ2 88 aa3.98□□□□□ -1.77
NECTIN3-209ENST00000488016 A0A1B0GU69 56 aa3.94□□□□□ -1.78
NECTIN3-209ENST00000488016 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
NECTIN3-209ENST00000488016 C7orf65Q6ZTY9 151 aa3.94□□□□□ -1.78
NECTIN3-209ENST00000488016 SEC61GP60059 68 aa3.93□□□□□ -1.78
NECTIN3-209ENST00000488016 LCA10Q71F78 164 aa3.93□□□□□ -1.78
NECTIN3-209ENST00000488016 M0R2T5 61 aa3.92□□□□□ -1.78
NECTIN3-209ENST00000488016 UQCR11O14957 56 aa3.92□□□□□ -1.78
NECTIN3-209ENST00000488016 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
NECTIN3-209ENST00000488016 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
NECTIN3-209ENST00000488016 SPINK7P58062 85 aa3.89□□□□□ -1.79
NECTIN3-209ENST00000488016 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
NECTIN3-209ENST00000488016 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
NECTIN3-209ENST00000488016 A6NN06 94 aa3.86□□□□□ -1.79
NECTIN3-209ENST00000488016 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
NECTIN3-209ENST00000488016 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
NECTIN3-209ENST00000488016 USH2AO75445 5202 aa3.84□□□□□ -1.79
NECTIN3-209ENST00000488016 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
NECTIN3-209ENST00000488016 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
NECTIN3-209ENST00000488016 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
NECTIN3-209ENST00000488016 A8MU10 97 aa3.79□□□□□ -1.8
NECTIN3-209ENST00000488016 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
NECTIN3-209ENST00000488016 MT2AP02795 61 aa3.78□□□□□ -1.8
NECTIN3-209ENST00000488016 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
NECTIN3-209ENST00000488016 MT1FP04733 61 aa3.77□□□□□ -1.81
NECTIN3-209ENST00000488016 K7ERS5 55 aa3.75□□□□□ -1.81
NECTIN3-209ENST00000488016 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
NECTIN3-209ENST00000488016 A0A1B0GU33 70 aa3.74□□□□□ -1.81
NECTIN3-209ENST00000488016 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
NECTIN3-209ENST00000488016 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
NECTIN3-209ENST00000488016 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
NECTIN3-209ENST00000488016 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
NECTIN3-209ENST00000488016 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
NECTIN3-209ENST00000488016 S4R3F8 94 aa3.64□□□□□ -1.83
NECTIN3-209ENST00000488016 H0YAA0 97 aa3.62□□□□□ -1.83
NECTIN3-209ENST00000488016 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
NECTIN3-209ENST00000488016 LINC01554Q52M75 96 aa3.6□□□□□ -1.83
NECTIN3-209ENST00000488016 NEBP20929 6669 aa3.6□□□□□ -1.83
NECTIN3-209ENST00000488016 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
NECTIN3-209ENST00000488016 CSAG1Q6PB30 78 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms