RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 COA5Q86WW8 74 aa4□□□□□ -1.77
SMARCAL1-212ENST00000486983 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
SMARCAL1-212ENST00000486983 PKHD1P08F94 4074 aa3.98□□□□□ -1.77
SMARCAL1-212ENST00000486983 LINC00304Q8N9R0 145 aa3.97□□□□□ -1.77
SMARCAL1-212ENST00000486983 APOBP04114 4563 aaKnown RBP3.95□□□□□ -1.78
SMARCAL1-212ENST00000486983 HRES1P13985 223 aa3.95□□□□□ -1.78
SMARCAL1-212ENST00000486983 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
SMARCAL1-212ENST00000486983 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
SMARCAL1-212ENST00000486983 Q5VV11 94 aa3.94□□□□□ -1.78
SMARCAL1-212ENST00000486983 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
SMARCAL1-212ENST00000486983 HERC2O95714 4834 aa3.94□□□□□ -1.78
SMARCAL1-212ENST00000486983 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
SMARCAL1-212ENST00000486983 ACYP2P14621 99 aa3.93□□□□□ -1.78
SMARCAL1-212ENST00000486983 Q75L30 129 aa3.93□□□□□ -1.78
SMARCAL1-212ENST00000486983 PRR26Q8N8Z3 221 aa3.93□□□□□ -1.78
SMARCAL1-212ENST00000486983 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
SMARCAL1-212ENST00000486983 PKHD1L1Q86WI1 4243 aa3.93□□□□□ -1.78
SMARCAL1-212ENST00000486983 A8MUN3 132 aa3.92□□□□□ -1.78
SMARCAL1-212ENST00000486983 PSPHP1O15172 72 aa3.92□□□□□ -1.78
SMARCAL1-212ENST00000486983 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
SMARCAL1-212ENST00000486983 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
SMARCAL1-212ENST00000486983 SMR3BP02814 79 aaPredicted RBP3.88□□□□□ -1.79
SMARCAL1-212ENST00000486983 C7orf65Q6ZTY9 151 aa3.88□□□□□ -1.79
SMARCAL1-212ENST00000486983 C20orf166-AS1Q96NR2 134 aa3.88□□□□□ -1.79
SMARCAL1-212ENST00000486983 A8MUU9 505 aa3.87□□□□□ -1.79
SMARCAL1-212ENST00000486983 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
SMARCAL1-212ENST00000486983 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
SMARCAL1-212ENST00000486983 FAT1Q14517 4588 aa3.87□□□□□ -1.79
SMARCAL1-212ENST00000486983 RETNLBQ9BQ08 111 aa3.85□□□□□ -1.79
SMARCAL1-212ENST00000486983 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
SMARCAL1-212ENST00000486983 A6NED7 52 aa3.83□□□□□ -1.8
SMARCAL1-212ENST00000486983 ABCA13Q86UQ4 5058 aa3.83□□□□□ -1.8
SMARCAL1-212ENST00000486983 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
SMARCAL1-212ENST00000486983 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
SMARCAL1-212ENST00000486983 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
SMARCAL1-212ENST00000486983 ATP11AUNQ6ZP68 121 aa3.8□□□□□ -1.8
SMARCAL1-212ENST00000486983 RYR1P21817 5038 aa3.79□□□□□ -1.8
SMARCAL1-212ENST00000486983 HSPG2P98160 4391 aa3.79□□□□□ -1.8
SMARCAL1-212ENST00000486983 LCA10Q71F78 164 aa3.79□□□□□ -1.8
SMARCAL1-212ENST00000486983 A0A1B0GU69 56 aa3.78□□□□□ -1.8
SMARCAL1-212ENST00000486983 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
SMARCAL1-212ENST00000486983 Q5VSD8 79 aa3.78□□□□□ -1.8
SMARCAL1-212ENST00000486983 SPTSSBQ8NFR3 76 aa3.78□□□□□ -1.8
SMARCAL1-212ENST00000486983 FAT3Q8TDW7 4589 aa3.78□□□□□ -1.8
SMARCAL1-212ENST00000486983 SPINK7P58062 85 aa3.77□□□□□ -1.81
SMARCAL1-212ENST00000486983 TNXBP22105 4242 aa3.77□□□□□ -1.81
SMARCAL1-212ENST00000486983 A8MU10 97 aa3.75□□□□□ -1.81
SMARCAL1-212ENST00000486983 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
SMARCAL1-212ENST00000486983 UQCR11O14957 56 aa3.73□□□□□ -1.81
SMARCAL1-212ENST00000486983 PMAIP1Q13794 54 aa3.73□□□□□ -1.81
SMARCAL1-212ENST00000486983 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
SMARCAL1-212ENST00000486983 A6NN06 94 aa3.72□□□□□ -1.81
SMARCAL1-212ENST00000486983 SPATA8Q6RVD6 105 aa3.72□□□□□ -1.81
SMARCAL1-212ENST00000486983 SEC61GP60059 68 aa3.71□□□□□ -1.82
SMARCAL1-212ENST00000486983 SEC61BP60468 96 aaKnown RBP3.71□□□□□ -1.82
SMARCAL1-212ENST00000486983 RPL37P61927 97 aaKnown RBP3.71□□□□□ -1.82
SMARCAL1-212ENST00000486983 COX6B2Q6YFQ2 88 aa3.71□□□□□ -1.82
SMARCAL1-212ENST00000486983 LRP1Q07954 4544 aaKnown RBP3.71□□□□□ -1.82
SMARCAL1-212ENST00000486983 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
SMARCAL1-212ENST00000486983 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
SMARCAL1-212ENST00000486983 MT1HL1P0DM35 61 aa3.68□□□□□ -1.82
SMARCAL1-212ENST00000486983 HERC1Q15751 4861 aa3.66□□□□□ -1.82
SMARCAL1-212ENST00000486983 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
SMARCAL1-212ENST00000486983 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
SMARCAL1-212ENST00000486983 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
SMARCAL1-212ENST00000486983 DMBT1Q9UGM3 2413 aaPredicted RBP3.6□□□□□ -1.83
SMARCAL1-212ENST00000486983 A0A1B0GU33 70 aa3.6□□□□□ -1.83
SMARCAL1-212ENST00000486983 H1FX-AS1Q4G0G2 97 aa3.6□□□□□ -1.83
SMARCAL1-212ENST00000486983 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
SMARCAL1-212ENST00000486983 H0YAA0 97 aa3.58□□□□□ -1.84
SMARCAL1-212ENST00000486983 S4R3F8 94 aa3.57□□□□□ -1.84
SMARCAL1-212ENST00000486983 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
SMARCAL1-212ENST00000486983 RBM12B-AS1Q9P1G2 102 aa3.52□□□□□ -1.85
SMARCAL1-212ENST00000486983 K7ERS5 55 aa3.5□□□□□ -1.85
SMARCAL1-212ENST00000486983 LRP2P98164 4655 aa3.47□□□□□ -1.85
SMARCAL1-212ENST00000486983 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
SMARCAL1-212ENST00000486983 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
SMARCAL1-212ENST00000486983 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
SMARCAL1-212ENST00000486983 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
SMARCAL1-212ENST00000486983 ADM2Q7Z4H4 148 aa3.44□□□□□ -1.86
SMARCAL1-212ENST00000486983 LPAP08519 4548 aa3.43□□□□□ -1.86
SMARCAL1-212ENST00000486983 KRTAP13-4Q3LI77 160 aa3.43□□□□□ -1.86
SMARCAL1-212ENST00000486983 P0C880 135 aa3.42□□□□□ -1.86
SMARCAL1-212ENST00000486983 M0QZ58 72 aa3.41□□□□□ -1.86
SMARCAL1-212ENST00000486983 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
SMARCAL1-212ENST00000486983 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
SMARCAL1-212ENST00000486983 ROMO1P60602 79 aa3.38□□□□□ -1.87
SMARCAL1-212ENST00000486983 LINC01554Q52M75 96 aa3.38□□□□□ -1.87
SMARCAL1-212ENST00000486983 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
SMARCAL1-212ENST00000486983 A0A0D9SG42 100 aa3.36□□□□□ -1.87
SMARCAL1-212ENST00000486983 KRTAP19-2Q3LHN2 52 aa3.34□□□□□ -1.87
SMARCAL1-212ENST00000486983 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
SMARCAL1-212ENST00000486983 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
SMARCAL1-212ENST00000486983 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
SMARCAL1-212ENST00000486983 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
SMARCAL1-212ENST00000486983 R4GN34 69 aa3.29□□□□□ -1.88
SMARCAL1-212ENST00000486983 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
SMARCAL1-212ENST00000486983 FLGP20930 4061 aaPredicted RBP3.26□□□□□ -1.89
SMARCAL1-212ENST00000486983 MUC2Q02817 5179 aa3.25□□□□□ -1.89
SMARCAL1-212ENST00000486983 CRIPTQ9P021 101 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms