RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 LPAP08519 4548 aa5.87□□□□□ -1.47
PRKCB-207ENST00000486868 A0A1B0GU69 56 aa5.84□□□□□ -1.47
PRKCB-207ENST00000486868 S4R3F8 94 aa5.83□□□□□ -1.48
PRKCB-207ENST00000486868 SEC61GP60059 68 aa5.81□□□□□ -1.48
PRKCB-207ENST00000486868 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
PRKCB-207ENST00000486868 LCA10Q71F78 164 aa5.79□□□□□ -1.48
PRKCB-207ENST00000486868 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
PRKCB-207ENST00000486868 HERC1Q15751 4861 aa5.77□□□□□ -1.49
PRKCB-207ENST00000486868 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
PRKCB-207ENST00000486868 A6NED7 52 aa5.73□□□□□ -1.49
PRKCB-207ENST00000486868 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
PRKCB-207ENST00000486868 KRTAP19-2Q3LHN2 52 aa5.72□□□□□ -1.49
PRKCB-207ENST00000486868 UQCR11O14957 56 aa5.71□□□□□ -1.5
PRKCB-207ENST00000486868 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
PRKCB-207ENST00000486868 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
PRKCB-207ENST00000486868 PRO0628Q9UI54 55 aa5.71□□□□□ -1.5
PRKCB-207ENST00000486868 H0YAA0 97 aa5.68□□□□□ -1.5
PRKCB-207ENST00000486868 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
PRKCB-207ENST00000486868 A0A1B0GU33 70 aa5.64□□□□□ -1.51
PRKCB-207ENST00000486868 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
PRKCB-207ENST00000486868 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
PRKCB-207ENST00000486868 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
PRKCB-207ENST00000486868 ADM2Q7Z4H4 148 aa5.55□□□□□ -1.52
PRKCB-207ENST00000486868 FLGP20930 4061 aaPredicted RBP5.55□□□□□ -1.52
PRKCB-207ENST00000486868 A8MU10 97 aa5.54□□□□□ -1.52
PRKCB-207ENST00000486868 P0C880 135 aa5.53□□□□□ -1.52
PRKCB-207ENST00000486868 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
PRKCB-207ENST00000486868 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
PRKCB-207ENST00000486868 M0QZ58 72 aa5.51□□□□□ -1.53
PRKCB-207ENST00000486868 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
PRKCB-207ENST00000486868 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
PRKCB-207ENST00000486868 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
PRKCB-207ENST00000486868 A6NN06 94 aa5.42□□□□□ -1.54
PRKCB-207ENST00000486868 CRIPTQ9P021 101 aa5.41□□□□□ -1.54
PRKCB-207ENST00000486868 MUC2Q02817 5179 aa5.4□□□□□ -1.54
PRKCB-207ENST00000486868 K7ERS5 55 aa5.4□□□□□ -1.54
PRKCB-207ENST00000486868 MT1HP80294 61 aa5.4□□□□□ -1.54
PRKCB-207ENST00000486868 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
PRKCB-207ENST00000486868 R4GN34 69 aa5.37□□□□□ -1.55
PRKCB-207ENST00000486868 A0A0D9SG42 100 aa5.31□□□□□ -1.56
PRKCB-207ENST00000486868 M0R2T5 61 aa5.31□□□□□ -1.56
PRKCB-207ENST00000486868 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
PRKCB-207ENST00000486868 FAT4Q6V0I7 4981 aa5.29□□□□□ -1.56
PRKCB-207ENST00000486868 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
PRKCB-207ENST00000486868 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
PRKCB-207ENST00000486868 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
PRKCB-207ENST00000486868 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
PRKCB-207ENST00000486868 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
PRKCB-207ENST00000486868 MT2AP02795 61 aa5.21□□□□□ -1.58
PRKCB-207ENST00000486868 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.58
PRKCB-207ENST00000486868 LINC01554Q52M75 96 aa5.19□□□□□ -1.58
PRKCB-207ENST00000486868 ROMO1P60602 79 aa5.17□□□□□ -1.58
PRKCB-207ENST00000486868 MT1FP04733 61 aa5.16□□□□□ -1.58
PRKCB-207ENST00000486868 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
PRKCB-207ENST00000486868 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
PRKCB-207ENST00000486868 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
PRKCB-207ENST00000486868 KRTAP19-8Q3LI54 63 aa5.08□□□□□ -1.6
PRKCB-207ENST00000486868 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
PRKCB-207ENST00000486868 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
PRKCB-207ENST00000486868 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
PRKCB-207ENST00000486868 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
PRKCB-207ENST00000486868 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
PRKCB-207ENST00000486868 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
PRKCB-207ENST00000486868 MT1BP07438 61 aa4.94□□□□□ -1.62
PRKCB-207ENST00000486868 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
PRKCB-207ENST00000486868 KRTAP9-6A0A140TA67 174 aa4.88□□□□□ -1.63
PRKCB-207ENST00000486868 TNP1P09430 55 aa4.86□□□□□ -1.63
PRKCB-207ENST00000486868 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
PRKCB-207ENST00000486868 LCE2BO14633 110 aa4.85□□□□□ -1.63
PRKCB-207ENST00000486868 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
PRKCB-207ENST00000486868 MT1XP80297 61 aa4.8□□□□□ -1.64
PRKCB-207ENST00000486868 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
PRKCB-207ENST00000486868 PRO2289Q9P1D8 64 aa4.79□□□□□ -1.64
PRKCB-207ENST00000486868 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
PRKCB-207ENST00000486868 FSIP2Q5CZC0 6907 aa4.61□□□□□ -1.67
PRKCB-207ENST00000486868 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
PRKCB-207ENST00000486868 USH2AO75445 5202 aa4.59□□□□□ -1.67
PRKCB-207ENST00000486868 KRTAP10-12P60413 245 aa4.59□□□□□ -1.67
PRKCB-207ENST00000486868 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
PRKCB-207ENST00000486868 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
PRKCB-207ENST00000486868 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
PRKCB-207ENST00000486868 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
PRKCB-207ENST00000486868 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
PRKCB-207ENST00000486868 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
PRKCB-207ENST00000486868 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
PRKCB-207ENST00000486868 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
PRKCB-207ENST00000486868 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
PRKCB-207ENST00000486868 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
PRKCB-207ENST00000486868 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
PRKCB-207ENST00000486868 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
PRKCB-207ENST00000486868 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
PRKCB-207ENST00000486868 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
PRKCB-207ENST00000486868 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
PRKCB-207ENST00000486868 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
PRKCB-207ENST00000486868 MT1EP04732 61 aa4.21□□□□□ -1.74
PRKCB-207ENST00000486868 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
PRKCB-207ENST00000486868 KMT2DO14686 5537 aa4.14□□□□□ -1.75
PRKCB-207ENST00000486868 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
PRKCB-207ENST00000486868 MT1LQ93083 61 aa4.14□□□□□ -1.75
PRKCB-207ENST00000486868 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms