RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 SPTSSBQ8NFR3 76 aa11.01□□□□□ -0.65
TRADD-202ENST00000486556 RBM12B-AS1Q9P1G2 102 aa10.99□□□□□ -0.65
TRADD-202ENST00000486556 A6NED7 52 aa10.95□□□□□ -0.66
TRADD-202ENST00000486556 A8MU10 97 aa10.92□□□□□ -0.66
TRADD-202ENST00000486556 LCA10Q71F78 164 aa10.92□□□□□ -0.66
TRADD-202ENST00000486556 MUC17Q685J3 4493 aa10.91□□□□□ -0.66
TRADD-202ENST00000486556 H1FX-AS1Q4G0G2 97 aa10.91□□□□□ -0.66
TRADD-202ENST00000486556 HMCN2Q8NDA2 5059 aa10.88□□□□□ -0.67
TRADD-202ENST00000486556 CDC42SE1Q9NRR8 79 aa10.88□□□□□ -0.67
TRADD-202ENST00000486556 KRTAP4-1Q9BYQ7 146 aa10.86□□□□□ -0.67
TRADD-202ENST00000486556 S4R3F8 94 aa10.84□□□□□ -0.67
TRADD-202ENST00000486556 A0A1B0GU69 56 aa10.81□□□□□ -0.68
TRADD-202ENST00000486556 KRTAP3-3Q9BYR6 98 aa10.78□□□□□ -0.68
TRADD-202ENST00000486556 SEC61GP60059 68 aa10.74□□□□□ -0.69
TRADD-202ENST00000486556 PMAIP1Q13794 54 aa10.74□□□□□ -0.69
TRADD-202ENST00000486556 KRTAP19-2Q3LHN2 52 aa10.62□□□□□ -0.71
TRADD-202ENST00000486556 CSAG1Q6PB30 78 aa10.61□□□□□ -0.71
TRADD-202ENST00000486556 A6NN06 94 aa10.61□□□□□ -0.71
TRADD-202ENST00000486556 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
TRADD-202ENST00000486556 UQCR11O14957 56 aa10.56□□□□□ -0.72
TRADD-202ENST00000486556 UBR4Q5T4S7 5183 aa10.52□□□□□ -0.73
TRADD-202ENST00000486556 MUC2Q02817 5179 aa10.52□□□□□ -0.73
TRADD-202ENST00000486556 MIR22HGQ0VDD5 57 aa10.51□□□□□ -0.73
TRADD-202ENST00000486556 KTN1-AS1Q86SY8 53 aa10.47□□□□□ -0.73
TRADD-202ENST00000486556 A0A1B0GU33 70 aa10.45□□□□□ -0.74
TRADD-202ENST00000486556 KRTAP10-6P60371 365 aaPredicted RBP10.43□□□□□ -0.74
TRADD-202ENST00000486556 KRTAP3-2Q9BYR7 98 aa10.42□□□□□ -0.74
TRADD-202ENST00000486556 H0YAA0 97 aa10.41□□□□□ -0.74
TRADD-202ENST00000486556 ADM2Q7Z4H4 148 aa10.37□□□□□ -0.75
TRADD-202ENST00000486556 RNF213Q63HN8 5207 aa10.31□□□□□ -0.76
TRADD-202ENST00000486556 LCE2CQ5TA81 110 aa10.31□□□□□ -0.76
TRADD-202ENST00000486556 FLGP20930 4061 aaPredicted RBP10.31□□□□□ -0.76
TRADD-202ENST00000486556 P0C880 135 aa10.3□□□□□ -0.76
TRADD-202ENST00000486556 M0QZ58 72 aa10.13□□□□□ -0.79
TRADD-202ENST00000486556 KRTAP13-4Q3LI77 160 aa10.12□□□□□ -0.79
TRADD-202ENST00000486556 MT1HP80294 61 aa10.1□□□□□ -0.79
TRADD-202ENST00000486556 FAT4Q6V0I7 4981 aa10.05□□□□□ -0.8
TRADD-202ENST00000486556 M0R2T5 61 aa10.04□□□□□ -0.8
TRADD-202ENST00000486556 PRAC1Q96KF2 57 aa10.01□□□□□ -0.81
TRADD-202ENST00000486556 R4GN34 69 aa10.01□□□□□ -0.81
TRADD-202ENST00000486556 A0A0D9SG42 100 aa9.96□□□□□ -0.82
TRADD-202ENST00000486556 LORP23490 312 aaPredicted RBP9.96□□□□□ -0.82
TRADD-202ENST00000486556 K7ERS5 55 aa9.93□□□□□ -0.82
TRADD-202ENST00000486556 CRIPTQ9P021 101 aa9.92□□□□□ -0.82
TRADD-202ENST00000486556 LINC01554Q52M75 96 aa9.79□□□□□ -0.84
TRADD-202ENST00000486556 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
TRADD-202ENST00000486556 KRTAP9-8Q9BYQ0 159 aa9.77□□□□□ -0.85
TRADD-202ENST00000486556 KRTAP12-2P59991 146 aa9.75□□□□□ -0.85
TRADD-202ENST00000486556 SPINT4Q6UDR6 99 aa9.75□□□□□ -0.85
TRADD-202ENST00000486556 MT2AP02795 61 aa9.72□□□□□ -0.85
TRADD-202ENST00000486556 LCE2AQ5TA79 106 aaPredicted RBP9.69□□□□□ -0.86
TRADD-202ENST00000486556 KRTAP10-10P60014 251 aa9.68□□□□□ -0.86
TRADD-202ENST00000486556 MT1FP04733 61 aa9.66□□□□□ -0.86
TRADD-202ENST00000486556 SPRR2GQ9BYE4 73 aa9.64□□□□□ -0.87
TRADD-202ENST00000486556 ROMO1P60602 79 aa9.62□□□□□ -0.87
TRADD-202ENST00000486556 KRTAP25-1Q3LHN0 102 aa9.61□□□□□ -0.87
TRADD-202ENST00000486556 KRTAP19-1Q8IUB9 90 aa9.57□□□□□ -0.88
TRADD-202ENST00000486556 KRTAP9-3Q9BYQ3 159 aa9.4□□□□□ -0.9
TRADD-202ENST00000486556 CAMK2N1Q7Z7J9 78 aa9.39□□□□□ -0.91
TRADD-202ENST00000486556 PLAC4Q8WY50 150 aa9.38□□□□□ -0.91
TRADD-202ENST00000486556 KRTAP19-8Q3LI54 63 aa9.36□□□□□ -0.91
TRADD-202ENST00000486556 C10orf95Q9H7T3 257 aa9.24□□□□□ -0.93
TRADD-202ENST00000486556 KRTAP9-2Q9BYQ4 174 aa9.22□□□□□ -0.93
TRADD-202ENST00000486556 MT1BP07438 61 aa9.19□□□□□ -0.94
TRADD-202ENST00000486556 LCE2BO14633 110 aa9.1□□□□□ -0.95
TRADD-202ENST00000486556 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
TRADD-202ENST00000486556 TNP1P09430 55 aa8.98□□□□□ -0.97
TRADD-202ENST00000486556 KRTAP10-5P60370 271 aa8.93□□□□□ -0.98
TRADD-202ENST00000486556 MT1XP80297 61 aa8.92□□□□□ -0.98
TRADD-202ENST00000486556 PRO2289Q9P1D8 64 aa8.88□□□□□ -0.99
TRADD-202ENST00000486556 KRTAP9-6A0A140TA67 174 aa8.82□□□□□ -1
TRADD-202ENST00000486556 FSIP2Q5CZC0 6907 aa8.82□□□□□ -1
TRADD-202ENST00000486556 PP632Q6XCG6 107 aa8.82□□□□□ -1
TRADD-202ENST00000486556 KRTAP23-1A1A580 65 aa8.8□□□□□ -1
TRADD-202ENST00000486556 USH2AO75445 5202 aa8.78□□□□□ -1
TRADD-202ENST00000486556 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
TRADD-202ENST00000486556 KRTAP15-1Q3LI76 137 aa8.71□□□□□ -1.01
TRADD-202ENST00000486556 KRTAP10-7P60409 375 aaPredicted RBP8.57□□□□□ -1.04
TRADD-202ENST00000486556 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
TRADD-202ENST00000486556 KRTAP10-12P60413 245 aa8.52□□□□□ -1.05
TRADD-202ENST00000486556 LCE3AQ5TA76 89 aa8.52□□□□□ -1.05
TRADD-202ENST00000486556 SSPOA2VEC9 5147 aa8.47□□□□□ -1.05
TRADD-202ENST00000486556 KRTAP8-1Q8IUC2 63 aa8.4□□□□□ -1.06
TRADD-202ENST00000486556 H3BS24 57 aa8.39□□□□□ -1.07
TRADD-202ENST00000486556 NDUFAF8A1L188 74 aa8.31□□□□□ -1.08
TRADD-202ENST00000486556 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
TRADD-202ENST00000486556 KRTAP12-3P60328 96 aa8.2□□□□□ -1.1
TRADD-202ENST00000486556 KRTAP4-8A0A0G2JLE6 195 aa8.19□□□□□ -1.1
TRADD-202ENST00000486556 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
TRADD-202ENST00000486556 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
TRADD-202ENST00000486556 KMT2DO14686 5537 aa8.11□□□□□ -1.11
TRADD-202ENST00000486556 KRTAP19-5Q3LI72 72 aa8.09□□□□□ -1.11
TRADD-202ENST00000486556 LUZP6Q538Z0 58 aa7.98□□□□□ -1.13
TRADD-202ENST00000486556 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
TRADD-202ENST00000486556 KRTAP9-7A8MTY7 169 aa7.97□□□□□ -1.13
TRADD-202ENST00000486556 KRTAP19-7Q3SYF9 63 aa7.97□□□□□ -1.13
TRADD-202ENST00000486556 MACF1Q9UPN3 7388 aaKnown RBP7.92□□□□□ -1.14
TRADD-202ENST00000486556 MT1EP04732 61 aa7.81□□□□□ -1.16
TRADD-202ENST00000486556 SYNE2Q8WXH0 6885 aaKnown RBP7.8□□□□□ -1.16
TRADD-202ENST00000486556 KRTAP19-4Q3LI73 84 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms