RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 H3BPC8 53 aa3.7□□□□□ -1.82
CPNE1-226ENST00000486021 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
CPNE1-226ENST00000486021 OCR1Q9BZK8 76 aa3.69□□□□□ -1.82
CPNE1-226ENST00000486021 C7orf65Q6ZTY9 151 aa3.68□□□□□ -1.82
CPNE1-226ENST00000486021 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
CPNE1-226ENST00000486021 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
CPNE1-226ENST00000486021 TRAV22A0A0B4J277 110 aa3.66□□□□□ -1.82
CPNE1-226ENST00000486021 CHKB-CPT1BH3BT56 60 aa3.66□□□□□ -1.82
CPNE1-226ENST00000486021 K7EQZ3 153 aa3.66□□□□□ -1.82
CPNE1-226ENST00000486021 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
CPNE1-226ENST00000486021 CASC2Q6XLA1 102 aa3.66□□□□□ -1.82
CPNE1-226ENST00000486021 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
CPNE1-226ENST00000486021 C1orf64Q8NEQ6 169 aa3.66□□□□□ -1.82
CPNE1-226ENST00000486021 HCG22E2RYF7 251 aa3.65□□□□□ -1.83
CPNE1-226ENST00000486021 MT2AP02795 61 aa3.65□□□□□ -1.83
CPNE1-226ENST00000486021 IGKV2D-30A0A075B6S6 120 aa3.64□□□□□ -1.83
CPNE1-226ENST00000486021 PSPHP1O15172 72 aa3.64□□□□□ -1.83
CPNE1-226ENST00000486021 IGKV2-30P06310 120 aa3.64□□□□□ -1.83
CPNE1-226ENST00000486021 LINC00208Q96KT6 92 aa3.64□□□□□ -1.83
CPNE1-226ENST00000486021 A6NED7 52 aa3.63□□□□□ -1.83
CPNE1-226ENST00000486021 SPTSSBQ8NFR3 76 aa3.63□□□□□ -1.83
CPNE1-226ENST00000486021 LCA10Q71F78 164 aa3.62□□□□□ -1.83
CPNE1-226ENST00000486021 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
CPNE1-226ENST00000486021 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
CPNE1-226ENST00000486021 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
CPNE1-226ENST00000486021 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
CPNE1-226ENST00000486021 A8MUN3 132 aa3.6□□□□□ -1.83
CPNE1-226ENST00000486021 MT1FP04733 61 aa3.6□□□□□ -1.83
CPNE1-226ENST00000486021 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
CPNE1-226ENST00000486021 KRTAP9-3Q9BYQ3 159 aa3.59□□□□□ -1.83
CPNE1-226ENST00000486021 LOC101927531A0A1B0GV80 90 aa3.58□□□□□ -1.84
CPNE1-226ENST00000486021 Q5VV11 94 aa3.58□□□□□ -1.84
CPNE1-226ENST00000486021 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
CPNE1-226ENST00000486021 Q5W150 140 aa3.57□□□□□ -1.84
CPNE1-226ENST00000486021 Q8N9L7 120 aa3.57□□□□□ -1.84
CPNE1-226ENST00000486021 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
CPNE1-226ENST00000486021 H0Y9P7 68 aa3.55□□□□□ -1.84
CPNE1-226ENST00000486021 A6NN06 94 aa3.54□□□□□ -1.84
CPNE1-226ENST00000486021 CSAG1Q6PB30 78 aa3.54□□□□□ -1.84
CPNE1-226ENST00000486021 KRTAP19-1Q8IUB9 90 aa3.54□□□□□ -1.84
CPNE1-226ENST00000486021 S4R3F8 94 aa3.54□□□□□ -1.84
CPNE1-226ENST00000486021 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
CPNE1-226ENST00000486021 COA5Q86WW8 74 aa3.52□□□□□ -1.85
CPNE1-226ENST00000486021 H3BS24 57 aa3.51□□□□□ -1.85
CPNE1-226ENST00000486021 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
CPNE1-226ENST00000486021 LINC01554Q52M75 96 aa3.48□□□□□ -1.85
CPNE1-226ENST00000486021 CRIPTQ9P021 101 aa3.45□□□□□ -1.86
CPNE1-226ENST00000486021 ACYP2P14621 99 aa3.43□□□□□ -1.86
CPNE1-226ENST00000486021 USH2AO75445 5202 aa3.41□□□□□ -1.86
CPNE1-226ENST00000486021 A0A1B0GU69 56 aa3.4□□□□□ -1.87
CPNE1-226ENST00000486021 KRTAP3-1Q9BYR8 98 aa3.4□□□□□ -1.87
CPNE1-226ENST00000486021 UQCR11O14957 56 aa3.39□□□□□ -1.87
CPNE1-226ENST00000486021 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
CPNE1-226ENST00000486021 A8MU10 97 aa3.37□□□□□ -1.87
CPNE1-226ENST00000486021 H0YAA0 97 aa3.37□□□□□ -1.87
CPNE1-226ENST00000486021 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
CPNE1-226ENST00000486021 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
CPNE1-226ENST00000486021 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
CPNE1-226ENST00000486021 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
CPNE1-226ENST00000486021 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
CPNE1-226ENST00000486021 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
CPNE1-226ENST00000486021 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
CPNE1-226ENST00000486021 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
CPNE1-226ENST00000486021 K7ERS5 55 aa3.31□□□□□ -1.88
CPNE1-226ENST00000486021 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
CPNE1-226ENST00000486021 KRTAP4-8Q9BYQ9 185 aa3.31□□□□□ -1.88
CPNE1-226ENST00000486021 MT1BP07438 61 aa3.3□□□□□ -1.88
CPNE1-226ENST00000486021 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
CPNE1-226ENST00000486021 PLAC4Q8WY50 150 aa3.3□□□□□ -1.88
CPNE1-226ENST00000486021 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
CPNE1-226ENST00000486021 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
CPNE1-226ENST00000486021 R4GN34 69 aa3.28□□□□□ -1.88
CPNE1-226ENST00000486021 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
CPNE1-226ENST00000486021 M0QZ58 72 aa3.21□□□□□ -1.9
CPNE1-226ENST00000486021 ROMO1P60602 79 aa3.21□□□□□ -1.9
CPNE1-226ENST00000486021 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
CPNE1-226ENST00000486021 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
CPNE1-226ENST00000486021 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
CPNE1-226ENST00000486021 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
CPNE1-226ENST00000486021 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
CPNE1-226ENST00000486021 P0C880 135 aa3.13□□□□□ -1.91
CPNE1-226ENST00000486021 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
CPNE1-226ENST00000486021 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
CPNE1-226ENST00000486021 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
CPNE1-226ENST00000486021 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
CPNE1-226ENST00000486021 A0A1B0GU33 70 aa3.11□□□□□ -1.91
CPNE1-226ENST00000486021 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
CPNE1-226ENST00000486021 MT1XP80297 61 aa3.09□□□□□ -1.91
CPNE1-226ENST00000486021 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
CPNE1-226ENST00000486021 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.91
CPNE1-226ENST00000486021 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
CPNE1-226ENST00000486021 SPRR2EP22531 72 aa3.08□□□□□ -1.92
CPNE1-226ENST00000486021 SPRR2BP35325 72 aa3.08□□□□□ -1.92
CPNE1-226ENST00000486021 SPRR2AP35326 72 aa3.08□□□□□ -1.92
CPNE1-226ENST00000486021 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
CPNE1-226ENST00000486021 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
CPNE1-226ENST00000486021 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
CPNE1-226ENST00000486021 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
CPNE1-226ENST00000486021 NEBP20929 6669 aa3.02□□□□□ -1.93
CPNE1-226ENST00000486021 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms