RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
HPS4-214ENST00000485842 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
HPS4-214ENST00000485842 H3BPC8 53 aa5.63□□□□□ -1.51
HPS4-214ENST00000485842 LCA10Q71F78 164 aa5.62□□□□□ -1.51
HPS4-214ENST00000485842 SMIM20Q8N5G0 67 aa5.6□□□□□ -1.51
HPS4-214ENST00000485842 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
HPS4-214ENST00000485842 KRTAP4-12Q9BQ66 201 aa5.59□□□□□ -1.51
HPS4-214ENST00000485842 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
HPS4-214ENST00000485842 A8MUN3 132 aa5.56□□□□□ -1.52
HPS4-214ENST00000485842 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
HPS4-214ENST00000485842 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
HPS4-214ENST00000485842 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
HPS4-214ENST00000485842 NDUFC1O43677 76 aa5.5□□□□□ -1.53
HPS4-214ENST00000485842 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
HPS4-214ENST00000485842 SNURFQ9Y675 71 aa5.49□□□□□ -1.53
HPS4-214ENST00000485842 SERP2Q8N6R1 65 aa5.48□□□□□ -1.53
HPS4-214ENST00000485842 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
HPS4-214ENST00000485842 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
HPS4-214ENST00000485842 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
HPS4-214ENST00000485842 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
HPS4-214ENST00000485842 FSIP2Q5CZC0 6907 aa5.44□□□□□ -1.54
HPS4-214ENST00000485842 PCP4P48539 62 aa5.43□□□□□ -1.54
HPS4-214ENST00000485842 ACYP2P14621 99 aa5.39□□□□□ -1.55
HPS4-214ENST00000485842 USH2AO75445 5202 aa5.38□□□□□ -1.55
HPS4-214ENST00000485842 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
HPS4-214ENST00000485842 COX7CP15954 63 aa5.37□□□□□ -1.55
HPS4-214ENST00000485842 H0YAA0 97 aa5.36□□□□□ -1.55
HPS4-214ENST00000485842 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
HPS4-214ENST00000485842 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
HPS4-214ENST00000485842 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
HPS4-214ENST00000485842 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
HPS4-214ENST00000485842 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
HPS4-214ENST00000485842 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
HPS4-214ENST00000485842 SPTSSBQ8NFR3 76 aa5.29□□□□□ -1.56
HPS4-214ENST00000485842 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
HPS4-214ENST00000485842 Q5VV11 94 aa5.27□□□□□ -1.57
HPS4-214ENST00000485842 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
HPS4-214ENST00000485842 P0C880 135 aa5.26□□□□□ -1.57
HPS4-214ENST00000485842 KRTAP19-8Q3LI54 63 aa5.26□□□□□ -1.57
HPS4-214ENST00000485842 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
HPS4-214ENST00000485842 MT1BP07438 61 aa5.25□□□□□ -1.57
HPS4-214ENST00000485842 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
HPS4-214ENST00000485842 H7BZZ5 65 aa5.24□□□□□ -1.57
HPS4-214ENST00000485842 COA5Q86WW8 74 aa5.22□□□□□ -1.57
HPS4-214ENST00000485842 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
HPS4-214ENST00000485842 R4GN34 69 aa5.2□□□□□ -1.58
HPS4-214ENST00000485842 M0QZ58 72 aa5.19□□□□□ -1.58
HPS4-214ENST00000485842 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
HPS4-214ENST00000485842 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
HPS4-214ENST00000485842 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
HPS4-214ENST00000485842 A6NN06 94 aa5.12□□□□□ -1.59
HPS4-214ENST00000485842 LINC01554Q52M75 96 aa5.12□□□□□ -1.59
HPS4-214ENST00000485842 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
HPS4-214ENST00000485842 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
HPS4-214ENST00000485842 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
HPS4-214ENST00000485842 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
HPS4-214ENST00000485842 SEC61GP60059 68 aa5.04□□□□□ -1.6
HPS4-214ENST00000485842 SERP1Q9Y6X1 66 aa5.03□□□□□ -1.6
HPS4-214ENST00000485842 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
HPS4-214ENST00000485842 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
HPS4-214ENST00000485842 TMEM258P61165 79 aa5□□□□□ -1.61
HPS4-214ENST00000485842 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
HPS4-214ENST00000485842 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
HPS4-214ENST00000485842 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
HPS4-214ENST00000485842 MT1XP80297 61 aa4.97□□□□□ -1.61
HPS4-214ENST00000485842 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
HPS4-214ENST00000485842 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.62
HPS4-214ENST00000485842 A0A1B0GU69 56 aa4.94□□□□□ -1.62
HPS4-214ENST00000485842 A0A1B0GU33 70 aa4.93□□□□□ -1.62
HPS4-214ENST00000485842 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
HPS4-214ENST00000485842 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
HPS4-214ENST00000485842 A0A0D9SG42 100 aa4.9□□□□□ -1.63
HPS4-214ENST00000485842 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
HPS4-214ENST00000485842 KRTAP6-3Q3LI67 103 aa4.86□□□□□ -1.63
HPS4-214ENST00000485842 PRR15LQ9BU68 103 aa4.86□□□□□ -1.63
HPS4-214ENST00000485842 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
HPS4-214ENST00000485842 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
HPS4-214ENST00000485842 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
HPS4-214ENST00000485842 SPINT4Q6UDR6 99 aa4.81□□□□□ -1.64
HPS4-214ENST00000485842 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
HPS4-214ENST00000485842 KRTAP12-2P59991 146 aa4.79□□□□□ -1.64
HPS4-214ENST00000485842 A8MU10 97 aa4.77□□□□□ -1.65
HPS4-214ENST00000485842 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
HPS4-214ENST00000485842 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
HPS4-214ENST00000485842 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
HPS4-214ENST00000485842 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
HPS4-214ENST00000485842 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
HPS4-214ENST00000485842 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
HPS4-214ENST00000485842 UQCR11O14957 56 aa4.69□□□□□ -1.66
HPS4-214ENST00000485842 V9GYY9 64 aa4.68□□□□□ -1.66
HPS4-214ENST00000485842 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
HPS4-214ENST00000485842 PSPHP1O15172 72 aa4.66□□□□□ -1.66
HPS4-214ENST00000485842 Q1T7F1 81 aa4.65□□□□□ -1.67
HPS4-214ENST00000485842 KMT2DO14686 5537 aa4.65□□□□□ -1.67
HPS4-214ENST00000485842 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
HPS4-214ENST00000485842 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
HPS4-214ENST00000485842 NEBP20929 6669 aa4.55□□□□□ -1.68
HPS4-214ENST00000485842 SPRR2EP22531 72 aa4.55□□□□□ -1.68
HPS4-214ENST00000485842 SPRR2BP35325 72 aa4.55□□□□□ -1.68
HPS4-214ENST00000485842 SPRR2AP35326 72 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 308.7 ms