RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 S4R3F8 94 aa7.92□□□□□ -1.14
ZNF248-206ENST00000485560 LCA10Q71F78 164 aa7.9□□□□□ -1.14
ZNF248-206ENST00000485560 CHKB-CPT1BH3BT56 60 aa7.87□□□□□ -1.15
ZNF248-206ENST00000485560 KRTAP3-3Q9BYR6 98 aa7.87□□□□□ -1.15
ZNF248-206ENST00000485560 SERP1Q9Y6X1 66 aa7.85□□□□□ -1.15
ZNF248-206ENST00000485560 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
ZNF248-206ENST00000485560 MT1HP80294 61 aa7.84□□□□□ -1.15
ZNF248-206ENST00000485560 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
ZNF248-206ENST00000485560 CSAG1Q6PB30 78 aa7.76□□□□□ -1.17
ZNF248-206ENST00000485560 SPTSSBQ8NFR3 76 aa7.75□□□□□ -1.17
ZNF248-206ENST00000485560 M0R2T5 61 aa7.74□□□□□ -1.17
ZNF248-206ENST00000485560 RPS28P62857 69 aaKnown RBP7.72□□□□□ -1.17
ZNF248-206ENST00000485560 SMIM26A0A096LP01 95 aa7.61□□□□□ -1.19
ZNF248-206ENST00000485560 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
ZNF248-206ENST00000485560 H0YAA0 97 aa7.55□□□□□ -1.2
ZNF248-206ENST00000485560 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
ZNF248-206ENST00000485560 LINC01558Q9Y6Z2 57 aa7.55□□□□□ -1.2
ZNF248-206ENST00000485560 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
ZNF248-206ENST00000485560 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
ZNF248-206ENST00000485560 KRTAP9-8Q9BYQ0 159 aa7.52□□□□□ -1.2
ZNF248-206ENST00000485560 Q1T7F1 81 aa7.52□□□□□ -1.21
ZNF248-206ENST00000485560 A0A1B0GU69 56 aa7.49□□□□□ -1.21
ZNF248-206ENST00000485560 P0C880 135 aa7.49□□□□□ -1.21
ZNF248-206ENST00000485560 SEC61GP60059 68 aa7.49□□□□□ -1.21
ZNF248-206ENST00000485560 V9GYY9 64 aa7.49□□□□□ -1.21
ZNF248-206ENST00000485560 MT2AP02795 61 aa7.48□□□□□ -1.21
ZNF248-206ENST00000485560 PRR15LQ9BU68 103 aa7.44□□□□□ -1.22
ZNF248-206ENST00000485560 MT1FP04733 61 aa7.44□□□□□ -1.22
ZNF248-206ENST00000485560 PSPHP1O15172 72 aa7.41□□□□□ -1.22
ZNF248-206ENST00000485560 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
ZNF248-206ENST00000485560 Q5VV11 94 aa7.34□□□□□ -1.23
ZNF248-206ENST00000485560 A0A1B0GU33 70 aa7.33□□□□□ -1.24
ZNF248-206ENST00000485560 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
ZNF248-206ENST00000485560 R4GN34 69 aa7.29□□□□□ -1.24
ZNF248-206ENST00000485560 M0QZ58 72 aa7.27□□□□□ -1.25
ZNF248-206ENST00000485560 KRTAP13-4Q3LI77 160 aa7.27□□□□□ -1.25
ZNF248-206ENST00000485560 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
ZNF248-206ENST00000485560 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
ZNF248-206ENST00000485560 KRTAP9-2Q9BYQ4 174 aa7.25□□□□□ -1.25
ZNF248-206ENST00000485560 LCE2DQ5TA82 110 aaPredicted RBP7.23□□□□□ -1.25
ZNF248-206ENST00000485560 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
ZNF248-206ENST00000485560 UQCR11O14957 56 aa7.22□□□□□ -1.25
ZNF248-206ENST00000485560 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
ZNF248-206ENST00000485560 A6NED7 52 aa7.17□□□□□ -1.26
ZNF248-206ENST00000485560 LINC01554Q52M75 96 aa7.15□□□□□ -1.26
ZNF248-206ENST00000485560 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
ZNF248-206ENST00000485560 A0A0D9SG42 100 aa7.12□□□□□ -1.27
ZNF248-206ENST00000485560 A8MU10 97 aa7.12□□□□□ -1.27
ZNF248-206ENST00000485560 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
ZNF248-206ENST00000485560 LCE2BO14633 110 aa7.1□□□□□ -1.27
ZNF248-206ENST00000485560 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
ZNF248-206ENST00000485560 USH2AO75445 5202 aa7.04□□□□□ -1.28
ZNF248-206ENST00000485560 CDC42SE1Q9NRR8 79 aa7.01□□□□□ -1.29
ZNF248-206ENST00000485560 MT1BP07438 61 aa7□□□□□ -1.29
ZNF248-206ENST00000485560 A6NN06 94 aa6.98□□□□□ -1.29
ZNF248-206ENST00000485560 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
ZNF248-206ENST00000485560 KRTAP12-2P59991 146 aa6.96□□□□□ -1.3
ZNF248-206ENST00000485560 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
ZNF248-206ENST00000485560 BRK1Q8WUW1 75 aa6.95□□□□□ -1.3
ZNF248-206ENST00000485560 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
ZNF248-206ENST00000485560 SSPOA2VEC9 5147 aa6.9□□□□□ -1.3
ZNF248-206ENST00000485560 CRCT1Q9UGL9 99 aa6.9□□□□□ -1.31
ZNF248-206ENST00000485560 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
ZNF248-206ENST00000485560 K7ERS5 55 aa6.82□□□□□ -1.32
ZNF248-206ENST00000485560 CAMK2N1Q7Z7J9 78 aa6.79□□□□□ -1.32
ZNF248-206ENST00000485560 MT1XP80297 61 aa6.73□□□□□ -1.33
ZNF248-206ENST00000485560 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
ZNF248-206ENST00000485560 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
ZNF248-206ENST00000485560 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
ZNF248-206ENST00000485560 PRO0628Q9UI54 55 aa6.67□□□□□ -1.34
ZNF248-206ENST00000485560 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
ZNF248-206ENST00000485560 C10orf95Q9H7T3 257 aa6.62□□□□□ -1.35
ZNF248-206ENST00000485560 PMAIP1Q13794 54 aa6.56□□□□□ -1.36
ZNF248-206ENST00000485560 ROMO1P60602 79 aa6.53□□□□□ -1.36
ZNF248-206ENST00000485560 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
ZNF248-206ENST00000485560 TNP1P09430 55 aa6.43□□□□□ -1.38
ZNF248-206ENST00000485560 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
ZNF248-206ENST00000485560 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
ZNF248-206ENST00000485560 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
ZNF248-206ENST00000485560 KRTAP10-12P60413 245 aa6.37□□□□□ -1.39
ZNF248-206ENST00000485560 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
ZNF248-206ENST00000485560 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
ZNF248-206ENST00000485560 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
ZNF248-206ENST00000485560 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
ZNF248-206ENST00000485560 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
ZNF248-206ENST00000485560 KMT2DO14686 5537 aa6.21□□□□□ -1.42
ZNF248-206ENST00000485560 KTN1-AS1Q86SY8 53 aa6.21□□□□□ -1.42
ZNF248-206ENST00000485560 PRAC1Q96KF2 57 aa6.19□□□□□ -1.42
ZNF248-206ENST00000485560 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
ZNF248-206ENST00000485560 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
ZNF248-206ENST00000485560 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
ZNF248-206ENST00000485560 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
ZNF248-206ENST00000485560 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
ZNF248-206ENST00000485560 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
ZNF248-206ENST00000485560 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
ZNF248-206ENST00000485560 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
ZNF248-206ENST00000485560 KRTAP12-3P60328 96 aa5.96□□□□□ -1.45
ZNF248-206ENST00000485560 SPRR2FQ96RM1 72 aa5.94□□□□□ -1.46
ZNF248-206ENST00000485560 MDN1Q9NU22 5596 aa5.9□□□□□ -1.46
ZNF248-206ENST00000485560 H3BS24 57 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms