RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
APTX-227ENST00000485479 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
APTX-227ENST00000485479 V9GYY9 64 aa5.72□□□□□ -1.49
APTX-227ENST00000485479 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
APTX-227ENST00000485479 MT2AP02795 61 aa5.7□□□□□ -1.5
APTX-227ENST00000485479 MT1FP04733 61 aa5.69□□□□□ -1.5
APTX-227ENST00000485479 LCA10Q71F78 164 aa5.67□□□□□ -1.5
APTX-227ENST00000485479 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
APTX-227ENST00000485479 S4R3F8 94 aa5.67□□□□□ -1.5
APTX-227ENST00000485479 TRAV7A0A075B6U4 112 aa5.64□□□□□ -1.51
APTX-227ENST00000485479 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
APTX-227ENST00000485479 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
APTX-227ENST00000485479 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
APTX-227ENST00000485479 H3BPC8 53 aa5.61□□□□□ -1.51
APTX-227ENST00000485479 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
APTX-227ENST00000485479 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
APTX-227ENST00000485479 USH2AO75445 5202 aa5.56□□□□□ -1.52
APTX-227ENST00000485479 CSAG1Q6PB30 78 aa5.55□□□□□ -1.52
APTX-227ENST00000485479 SERP2Q8N6R1 65 aa5.55□□□□□ -1.52
APTX-227ENST00000485479 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
APTX-227ENST00000485479 A8MUN3 132 aa5.52□□□□□ -1.53
APTX-227ENST00000485479 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
APTX-227ENST00000485479 H3BS24 57 aa5.5□□□□□ -1.53
APTX-227ENST00000485479 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
APTX-227ENST00000485479 NDUFC1O43677 76 aa5.49□□□□□ -1.53
APTX-227ENST00000485479 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
APTX-227ENST00000485479 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.54
APTX-227ENST00000485479 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
APTX-227ENST00000485479 COX7CP15954 63 aa5.46□□□□□ -1.54
APTX-227ENST00000485479 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
APTX-227ENST00000485479 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
APTX-227ENST00000485479 ANAPC13Q9BS18 74 aa5.42□□□□□ -1.54
APTX-227ENST00000485479 ACYP2P14621 99 aa5.4□□□□□ -1.55
APTX-227ENST00000485479 ADM2Q7Z4H4 148 aa5.39□□□□□ -1.55
APTX-227ENST00000485479 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
APTX-227ENST00000485479 CCDC179H3BU77 68 aa5.35□□□□□ -1.55
APTX-227ENST00000485479 RPS28P62857 69 aaKnown RBP5.35□□□□□ -1.55
APTX-227ENST00000485479 CHKB-CPT1BH3BT56 60 aa5.35□□□□□ -1.55
APTX-227ENST00000485479 H7BZZ5 65 aa5.35□□□□□ -1.55
APTX-227ENST00000485479 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
APTX-227ENST00000485479 H0YAA0 97 aa5.33□□□□□ -1.56
APTX-227ENST00000485479 P0C880 135 aa5.33□□□□□ -1.56
APTX-227ENST00000485479 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
APTX-227ENST00000485479 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
APTX-227ENST00000485479 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
APTX-227ENST00000485479 COA5Q86WW8 74 aa5.29□□□□□ -1.56
APTX-227ENST00000485479 MT1BP07438 61 aa5.26□□□□□ -1.57
APTX-227ENST00000485479 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
APTX-227ENST00000485479 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
APTX-227ENST00000485479 SPTSSBQ8NFR3 76 aa5.24□□□□□ -1.57
APTX-227ENST00000485479 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
APTX-227ENST00000485479 Q5VV11 94 aa5.22□□□□□ -1.57
APTX-227ENST00000485479 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
APTX-227ENST00000485479 R4GN34 69 aa5.21□□□□□ -1.58
APTX-227ENST00000485479 M0QZ58 72 aa5.2□□□□□ -1.58
APTX-227ENST00000485479 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
APTX-227ENST00000485479 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
APTX-227ENST00000485479 LINC01554Q52M75 96 aa5.17□□□□□ -1.58
APTX-227ENST00000485479 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
APTX-227ENST00000485479 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
APTX-227ENST00000485479 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
APTX-227ENST00000485479 A6NN06 94 aa5.09□□□□□ -1.59
APTX-227ENST00000485479 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.59
APTX-227ENST00000485479 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
APTX-227ENST00000485479 TMEM258P61165 79 aa5.06□□□□□ -1.6
APTX-227ENST00000485479 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
APTX-227ENST00000485479 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
APTX-227ENST00000485479 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
APTX-227ENST00000485479 SERP1Q9Y6X1 66 aa5.03□□□□□ -1.6
APTX-227ENST00000485479 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
APTX-227ENST00000485479 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
APTX-227ENST00000485479 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
APTX-227ENST00000485479 MT1XP80297 61 aa5□□□□□ -1.61
APTX-227ENST00000485479 A0A1B0GU69 56 aa4.99□□□□□ -1.61
APTX-227ENST00000485479 BRK1Q8WUW1 75 aa4.98□□□□□ -1.61
APTX-227ENST00000485479 A0A0D9SG42 100 aa4.97□□□□□ -1.61
APTX-227ENST00000485479 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
APTX-227ENST00000485479 A0A1B0GU33 70 aa4.96□□□□□ -1.62
APTX-227ENST00000485479 KMT2DO14686 5537 aa4.94□□□□□ -1.62
APTX-227ENST00000485479 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
APTX-227ENST00000485479 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.63
APTX-227ENST00000485479 SMIM26A0A096LP01 95 aa4.89□□□□□ -1.63
APTX-227ENST00000485479 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
APTX-227ENST00000485479 A8MU10 97 aa4.88□□□□□ -1.63
APTX-227ENST00000485479 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
APTX-227ENST00000485479 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
APTX-227ENST00000485479 PSPHP1O15172 72 aa4.83□□□□□ -1.64
APTX-227ENST00000485479 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
APTX-227ENST00000485479 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
APTX-227ENST00000485479 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
APTX-227ENST00000485479 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
APTX-227ENST00000485479 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
APTX-227ENST00000485479 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
APTX-227ENST00000485479 UQCR11O14957 56 aa4.72□□□□□ -1.65
APTX-227ENST00000485479 Q1T7F1 81 aa4.72□□□□□ -1.65
APTX-227ENST00000485479 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
APTX-227ENST00000485479 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
APTX-227ENST00000485479 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
APTX-227ENST00000485479 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
APTX-227ENST00000485479 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms