RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 LOC101927531A0A1B0GV80 90 aa5.65□□□□□ -1.5
MSH5-216ENST00000484309 CSAG1Q6PB30 78 aa5.65□□□□□ -1.5
MSH5-216ENST00000484309 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.5
MSH5-216ENST00000484309 KRTAP9-7A8MTY7 169 aa5.64□□□□□ -1.51
MSH5-216ENST00000484309 H0Y9P7 68 aa5.64□□□□□ -1.51
MSH5-216ENST00000484309 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
MSH5-216ENST00000484309 LINC00643Q86TS7 51 aa5.63□□□□□ -1.51
MSH5-216ENST00000484309 UQCRQO14949 82 aa5.62□□□□□ -1.51
MSH5-216ENST00000484309 ANAPC13Q9BS18 74 aa5.6□□□□□ -1.51
MSH5-216ENST00000484309 ATOX1O00244 68 aa5.58□□□□□ -1.52
MSH5-216ENST00000484309 SMIM20Q8N5G0 67 aa5.57□□□□□ -1.52
MSH5-216ENST00000484309 LINC00208Q96KT6 92 aa5.55□□□□□ -1.52
MSH5-216ENST00000484309 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
MSH5-216ENST00000484309 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
MSH5-216ENST00000484309 KLKP1Q107X0 134 aa5.53□□□□□ -1.52
MSH5-216ENST00000484309 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
MSH5-216ENST00000484309 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
MSH5-216ENST00000484309 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
MSH5-216ENST00000484309 MT1BP07438 61 aa5.5□□□□□ -1.53
MSH5-216ENST00000484309 MP68P56378 58 aa5.5□□□□□ -1.53
MSH5-216ENST00000484309 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
MSH5-216ENST00000484309 Q5VV11 94 aa5.49□□□□□ -1.53
MSH5-216ENST00000484309 SYNE2Q8WXH0 6885 aaKnown RBP5.48□□□□□ -1.53
MSH5-216ENST00000484309 NDUFC1O43677 76 aa5.47□□□□□ -1.53
MSH5-216ENST00000484309 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
MSH5-216ENST00000484309 MT-ATP8P03928 68 aa5.46□□□□□ -1.54
MSH5-216ENST00000484309 A8MUN3 132 aa5.45□□□□□ -1.54
MSH5-216ENST00000484309 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
MSH5-216ENST00000484309 A6NN06 94 aa5.42□□□□□ -1.54
MSH5-216ENST00000484309 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
MSH5-216ENST00000484309 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
MSH5-216ENST00000484309 ADM2Q7Z4H4 148 aa5.4□□□□□ -1.54
MSH5-216ENST00000484309 CRIPTQ9P021 101 aa5.4□□□□□ -1.54
MSH5-216ENST00000484309 H0YAA0 97 aa5.38□□□□□ -1.55
MSH5-216ENST00000484309 H3BPC8 53 aa5.38□□□□□ -1.55
MSH5-216ENST00000484309 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
MSH5-216ENST00000484309 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
MSH5-216ENST00000484309 DMAC1Q96GE9 116 aa5.34□□□□□ -1.55
MSH5-216ENST00000484309 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
MSH5-216ENST00000484309 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
MSH5-216ENST00000484309 TMEM258P61165 79 aa5.3□□□□□ -1.56
MSH5-216ENST00000484309 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
MSH5-216ENST00000484309 P0C880 135 aa5.28□□□□□ -1.56
MSH5-216ENST00000484309 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
MSH5-216ENST00000484309 SEC61GP60059 68 aa5.27□□□□□ -1.57
MSH5-216ENST00000484309 V9GYY9 64 aa5.25□□□□□ -1.57
MSH5-216ENST00000484309 COX7CP15954 63 aa5.24□□□□□ -1.57
MSH5-216ENST00000484309 R4GN34 69 aa5.24□□□□□ -1.57
MSH5-216ENST00000484309 M0QZ58 72 aa5.22□□□□□ -1.57
MSH5-216ENST00000484309 C20orf197Q8N268 126 aa5.22□□□□□ -1.57
MSH5-216ENST00000484309 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
MSH5-216ENST00000484309 ACYP2P14621 99 aa5.2□□□□□ -1.58
MSH5-216ENST00000484309 MUC12Q9UKN1 5478 aa5.2□□□□□ -1.58
MSH5-216ENST00000484309 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
MSH5-216ENST00000484309 LINC01554Q52M75 96 aa5.17□□□□□ -1.58
MSH5-216ENST00000484309 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
MSH5-216ENST00000484309 MT1XP80297 61 aa5.16□□□□□ -1.58
MSH5-216ENST00000484309 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
MSH5-216ENST00000484309 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
MSH5-216ENST00000484309 SERP2Q8N6R1 65 aa5.13□□□□□ -1.59
MSH5-216ENST00000484309 SERP1Q9Y6X1 66 aa5.13□□□□□ -1.59
MSH5-216ENST00000484309 NEBP20929 6669 aa5.13□□□□□ -1.59
MSH5-216ENST00000484309 SPTSSBQ8NFR3 76 aa5.12□□□□□ -1.59
MSH5-216ENST00000484309 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
MSH5-216ENST00000484309 SMIM26A0A096LP01 95 aa5.09□□□□□ -1.59
MSH5-216ENST00000484309 ATP5EP56381 51 aaPredicted RBP5.09□□□□□ -1.59
MSH5-216ENST00000484309 KMT2DO14686 5537 aa5.08□□□□□ -1.6
MSH5-216ENST00000484309 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
MSH5-216ENST00000484309 SPANXA2-OT1Q8N9U9 137 aa5.06□□□□□ -1.6
MSH5-216ENST00000484309 MDN1Q9NU22 5596 aa5.03□□□□□ -1.6
MSH5-216ENST00000484309 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
MSH5-216ENST00000484309 BRK1Q8WUW1 75 aa5□□□□□ -1.61
MSH5-216ENST00000484309 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
MSH5-216ENST00000484309 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
MSH5-216ENST00000484309 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
MSH5-216ENST00000484309 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
MSH5-216ENST00000484309 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
MSH5-216ENST00000484309 COA5Q86WW8 74 aa4.97□□□□□ -1.61
MSH5-216ENST00000484309 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
MSH5-216ENST00000484309 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
MSH5-216ENST00000484309 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
MSH5-216ENST00000484309 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
MSH5-216ENST00000484309 SPRR2EP22531 72 aa4.93□□□□□ -1.62
MSH5-216ENST00000484309 SPRR2BP35325 72 aa4.93□□□□□ -1.62
MSH5-216ENST00000484309 SPRR2AP35326 72 aa4.93□□□□□ -1.62
MSH5-216ENST00000484309 H7BZZ5 65 aa4.92□□□□□ -1.62
MSH5-216ENST00000484309 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
MSH5-216ENST00000484309 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
MSH5-216ENST00000484309 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
MSH5-216ENST00000484309 CAMK2N1Q7Z7J9 78 aa4.84□□□□□ -1.63
MSH5-216ENST00000484309 A0A0D9SG42 100 aa4.83□□□□□ -1.64
MSH5-216ENST00000484309 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
MSH5-216ENST00000484309 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
MSH5-216ENST00000484309 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
MSH5-216ENST00000484309 SPATA8Q6RVD6 105 aa4.81□□□□□ -1.64
MSH5-216ENST00000484309 KRTAP2-4Q9BYR9 128 aa4.81□□□□□ -1.64
MSH5-216ENST00000484309 Q1T7F1 81 aa4.79□□□□□ -1.64
MSH5-216ENST00000484309 A0A1B0GU33 70 aa4.77□□□□□ -1.65
MSH5-216ENST00000484309 SPRR2DP22532 72 aa4.76□□□□□ -1.65
MSH5-216ENST00000484309 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms