RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 IGKV2-30P06310 120 aa2.94□□□□□ -1.94
COL17A1-206ENST00000483876 PRR4Q16378 134 aa2.94□□□□□ -1.94
COL17A1-206ENST00000483876 Q75L30 129 aa2.94□□□□□ -1.94
COL17A1-206ENST00000483876 USH2AO75445 5202 aa2.94□□□□□ -1.94
COL17A1-206ENST00000483876 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
COL17A1-206ENST00000483876 NEBP20929 6669 aa2.92□□□□□ -1.94
COL17A1-206ENST00000483876 SMIM26A0A096LP01 95 aa2.92□□□□□ -1.94
COL17A1-206ENST00000483876 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
COL17A1-206ENST00000483876 RETNLBQ9BQ08 111 aa2.92□□□□□ -1.94
COL17A1-206ENST00000483876 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
COL17A1-206ENST00000483876 C9orf92A6NGG3 77 aa2.91□□□□□ -1.94
COL17A1-206ENST00000483876 PCOTHQ58A44 107 aa2.91□□□□□ -1.94
COL17A1-206ENST00000483876 KRTAP19-1Q8IUB9 90 aa2.91□□□□□ -1.94
COL17A1-206ENST00000483876 HRES1P13985 223 aa2.9□□□□□ -1.95
COL17A1-206ENST00000483876 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
COL17A1-206ENST00000483876 C7orf65Q6ZTY9 151 aa2.9□□□□□ -1.95
COL17A1-206ENST00000483876 ACYP2P14621 99 aa2.89□□□□□ -1.95
COL17A1-206ENST00000483876 TPRXLQ17RH7 258 aa2.89□□□□□ -1.95
COL17A1-206ENST00000483876 ATP11AUNQ6ZP68 121 aa2.89□□□□□ -1.95
COL17A1-206ENST00000483876 DMAC1Q96GE9 116 aa2.89□□□□□ -1.95
COL17A1-206ENST00000483876 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
COL17A1-206ENST00000483876 A8MUN3 132 aa2.88□□□□□ -1.95
COL17A1-206ENST00000483876 H3BS24 57 aa2.88□□□□□ -1.95
COL17A1-206ENST00000483876 RPL37P61927 97 aaKnown RBP2.88□□□□□ -1.95
COL17A1-206ENST00000483876 SPINK7P58062 85 aa2.87□□□□□ -1.95
COL17A1-206ENST00000483876 V9GYY9 64 aa2.87□□□□□ -1.95
COL17A1-206ENST00000483876 Q1T7F1 81 aa2.86□□□□□ -1.95
COL17A1-206ENST00000483876 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
COL17A1-206ENST00000483876 COA5Q86WW8 74 aa2.86□□□□□ -1.95
COL17A1-206ENST00000483876 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
COL17A1-206ENST00000483876 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
COL17A1-206ENST00000483876 KRTAP10-6P60371 365 aaPredicted RBP2.83□□□□□ -1.96
COL17A1-206ENST00000483876 C4orf26Q17RF5 130 aa2.81□□□□□ -1.96
COL17A1-206ENST00000483876 COX6B2Q6YFQ2 88 aa2.81□□□□□ -1.96
COL17A1-206ENST00000483876 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
COL17A1-206ENST00000483876 CHKB-CPT1BH3BT56 60 aa2.8□□□□□ -1.96
COL17A1-206ENST00000483876 MT1HP80294 61 aa2.8□□□□□ -1.96
COL17A1-206ENST00000483876 KRTAP3-1Q9BYR8 98 aa2.8□□□□□ -1.96
COL17A1-206ENST00000483876 SEC61BP60468 96 aaKnown RBP2.79□□□□□ -1.96
COL17A1-206ENST00000483876 SPTSSBQ8NFR3 76 aa2.79□□□□□ -1.96
COL17A1-206ENST00000483876 MPLKIPQ8TAP9 179 aa2.79□□□□□ -1.96
COL17A1-206ENST00000483876 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
COL17A1-206ENST00000483876 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
COL17A1-206ENST00000483876 PRR15LQ9BU68 103 aa2.75□□□□□ -1.97
COL17A1-206ENST00000483876 KRTAP4-1Q9BYQ7 146 aa2.75□□□□□ -1.97
COL17A1-206ENST00000483876 M0R2T5 61 aa2.74□□□□□ -1.97
COL17A1-206ENST00000483876 PSPHP1O15172 72 aa2.74□□□□□ -1.97
COL17A1-206ENST00000483876 RBM12B-AS1Q9P1G2 102 aa2.74□□□□□ -1.97
COL17A1-206ENST00000483876 H1FX-AS1Q4G0G2 97 aa2.73□□□□□ -1.97
COL17A1-206ENST00000483876 Q5VV11 94 aa2.73□□□□□ -1.97
COL17A1-206ENST00000483876 A0A1B0GU69 56 aa2.72□□□□□ -1.97
COL17A1-206ENST00000483876 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
COL17A1-206ENST00000483876 SEC61GP60059 68 aa2.71□□□□□ -1.98
COL17A1-206ENST00000483876 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
COL17A1-206ENST00000483876 KRTAP19-2Q3LHN2 52 aa2.69□□□□□ -1.98
COL17A1-206ENST00000483876 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
COL17A1-206ENST00000483876 S4R3F8 94 aa2.69□□□□□ -1.98
COL17A1-206ENST00000483876 LCA10Q71F78 164 aa2.68□□□□□ -1.98
COL17A1-206ENST00000483876 PRO0628Q9UI54 55 aa2.68□□□□□ -1.98
COL17A1-206ENST00000483876 KMT2DO14686 5537 aa2.67□□□□□ -1.98
COL17A1-206ENST00000483876 A6NED7 52 aa2.67□□□□□ -1.98
COL17A1-206ENST00000483876 UQCR11O14957 56 aa2.67□□□□□ -1.98
COL17A1-206ENST00000483876 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
COL17A1-206ENST00000483876 CSAG1Q6PB30 78 aa2.67□□□□□ -1.98
COL17A1-206ENST00000483876 SPATA8Q6RVD6 105 aa2.66□□□□□ -1.98
COL17A1-206ENST00000483876 BRK1Q8WUW1 75 aa2.66□□□□□ -1.98
COL17A1-206ENST00000483876 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
COL17A1-206ENST00000483876 H0YAA0 97 aa2.65□□□□□ -1.99
COL17A1-206ENST00000483876 A0A1B0GU33 70 aa2.63□□□□□ -1.99
COL17A1-206ENST00000483876 MIR22HGQ0VDD5 57 aa2.62□□□□□ -1.99
COL17A1-206ENST00000483876 KRTAP19-4Q3LI73 84 aa2.62□□□□□ -1.99
COL17A1-206ENST00000483876 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
COL17A1-206ENST00000483876 M0QZ58 72 aa2.58□□□□□ -2
COL17A1-206ENST00000483876 SVIPQ8NHG7 77 aa2.58□□□□□ -2
COL17A1-206ENST00000483876 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
COL17A1-206ENST00000483876 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
COL17A1-206ENST00000483876 MDN1Q9NU22 5596 aa2.58□□□□□ -2
COL17A1-206ENST00000483876 A8MU10 97 aa2.57□□□□□ -2
COL17A1-206ENST00000483876 ADM2Q7Z4H4 148 aa2.57□□□□□ -2
COL17A1-206ENST00000483876 P0C880 135 aa2.56□□□□□ -2
COL17A1-206ENST00000483876 PMAIP1Q13794 54 aa2.55□□□□□ -2
COL17A1-206ENST00000483876 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2
COL17A1-206ENST00000483876 A6NN06 94 aa2.53□□□□□ -2
COL17A1-206ENST00000483876 CRIPTQ9P021 101 aa2.53□□□□□ -2
COL17A1-206ENST00000483876 K7ERS5 55 aa2.52□□□□□ -2.01
COL17A1-206ENST00000483876 KRTAP13-4Q3LI77 160 aa2.51□□□□□ -2.01
COL17A1-206ENST00000483876 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
COL17A1-206ENST00000483876 KRTAP9-3Q9BYQ3 159 aa2.5□□□□□ -2.01
COL17A1-206ENST00000483876 R4GN34 69 aa2.49□□□□□ -2.01
COL17A1-206ENST00000483876 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
COL17A1-206ENST00000483876 A0A0D9SG42 100 aa2.46□□□□□ -2.02
COL17A1-206ENST00000483876 MT2AP02795 61 aa2.46□□□□□ -2.02
COL17A1-206ENST00000483876 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
COL17A1-206ENST00000483876 MT1FP04733 61 aa2.44□□□□□ -2.02
COL17A1-206ENST00000483876 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
COL17A1-206ENST00000483876 KRTAP12-2P59991 146 aa2.43□□□□□ -2.02
COL17A1-206ENST00000483876 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
COL17A1-206ENST00000483876 SPINT4Q6UDR6 99 aa2.42□□□□□ -2.02
COL17A1-206ENST00000483876 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
COL17A1-206ENST00000483876 ROMO1P60602 79 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms