RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
SND1-210ENST00000483503 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
SND1-210ENST00000483503 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
SND1-210ENST00000483503 A0A1B0GU69 56 aa6.23□□□□□ -1.41
SND1-210ENST00000483503 A6NED7 52 aa6.23□□□□□ -1.41
SND1-210ENST00000483503 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
SND1-210ENST00000483503 SEC61GP60059 68 aa6.2□□□□□ -1.42
SND1-210ENST00000483503 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
SND1-210ENST00000483503 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
SND1-210ENST00000483503 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
SND1-210ENST00000483503 UQCR11O14957 56 aa6.1□□□□□ -1.43
SND1-210ENST00000483503 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
SND1-210ENST00000483503 LCA10Q71F78 164 aa6.09□□□□□ -1.43
SND1-210ENST00000483503 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
SND1-210ENST00000483503 S4R3F8 94 aa6.07□□□□□ -1.44
SND1-210ENST00000483503 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
SND1-210ENST00000483503 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
SND1-210ENST00000483503 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
SND1-210ENST00000483503 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.45
SND1-210ENST00000483503 A8MU10 97 aa6□□□□□ -1.45
SND1-210ENST00000483503 A0A1B0GU33 70 aa5.98□□□□□ -1.45
SND1-210ENST00000483503 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
SND1-210ENST00000483503 MUC2Q02817 5179 aa5.97□□□□□ -1.45
SND1-210ENST00000483503 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
SND1-210ENST00000483503 LRP2P98164 4655 aa5.91□□□□□ -1.46
SND1-210ENST00000483503 A6NN06 94 aa5.89□□□□□ -1.47
SND1-210ENST00000483503 LPAP08519 4548 aa5.86□□□□□ -1.47
SND1-210ENST00000483503 H0YAA0 97 aa5.86□□□□□ -1.47
SND1-210ENST00000483503 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
SND1-210ENST00000483503 KRTAP10-6P60371 365 aaPredicted RBP5.85□□□□□ -1.47
SND1-210ENST00000483503 FAT4Q6V0I7 4981 aa5.84□□□□□ -1.47
SND1-210ENST00000483503 LCE2BO14633 110 aa5.83□□□□□ -1.48
SND1-210ENST00000483503 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
SND1-210ENST00000483503 K7ERS5 55 aa5.81□□□□□ -1.48
SND1-210ENST00000483503 ADM2Q7Z4H4 148 aa5.81□□□□□ -1.48
SND1-210ENST00000483503 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
SND1-210ENST00000483503 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
SND1-210ENST00000483503 P0C880 135 aa5.76□□□□□ -1.49
SND1-210ENST00000483503 M0QZ58 72 aa5.73□□□□□ -1.49
SND1-210ENST00000483503 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.5
SND1-210ENST00000483503 KRTAP19-2Q3LHN2 52 aa5.71□□□□□ -1.5
SND1-210ENST00000483503 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
SND1-210ENST00000483503 A0A0D9SG42 100 aa5.65□□□□□ -1.5
SND1-210ENST00000483503 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.5
SND1-210ENST00000483503 LCE2CQ5TA81 110 aa5.64□□□□□ -1.51
SND1-210ENST00000483503 R4GN34 69 aa5.61□□□□□ -1.51
SND1-210ENST00000483503 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
SND1-210ENST00000483503 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
SND1-210ENST00000483503 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
SND1-210ENST00000483503 ROMO1P60602 79 aa5.53□□□□□ -1.52
SND1-210ENST00000483503 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
SND1-210ENST00000483503 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
SND1-210ENST00000483503 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
SND1-210ENST00000483503 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
SND1-210ENST00000483503 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
SND1-210ENST00000483503 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
SND1-210ENST00000483503 M0R2T5 61 aa5.43□□□□□ -1.54
SND1-210ENST00000483503 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
SND1-210ENST00000483503 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
SND1-210ENST00000483503 MT1HP80294 61 aa5.39□□□□□ -1.55
SND1-210ENST00000483503 H3BS24 57 aa5.37□□□□□ -1.55
SND1-210ENST00000483503 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
SND1-210ENST00000483503 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
SND1-210ENST00000483503 KRTAP10-10P60014 251 aa5.25□□□□□ -1.57
SND1-210ENST00000483503 MT2AP02795 61 aa5.24□□□□□ -1.57
SND1-210ENST00000483503 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
SND1-210ENST00000483503 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
SND1-210ENST00000483503 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
SND1-210ENST00000483503 MT1FP04733 61 aa5.2□□□□□ -1.58
SND1-210ENST00000483503 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
SND1-210ENST00000483503 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
SND1-210ENST00000483503 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
SND1-210ENST00000483503 TNP1P09430 55 aa5.08□□□□□ -1.6
SND1-210ENST00000483503 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
SND1-210ENST00000483503 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
SND1-210ENST00000483503 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
SND1-210ENST00000483503 MT1BP07438 61 aa4.98□□□□□ -1.61
SND1-210ENST00000483503 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
SND1-210ENST00000483503 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.63
SND1-210ENST00000483503 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
SND1-210ENST00000483503 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
SND1-210ENST00000483503 MT1XP80297 61 aa4.87□□□□□ -1.63
SND1-210ENST00000483503 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
SND1-210ENST00000483503 NEBP20929 6669 aa4.84□□□□□ -1.63
SND1-210ENST00000483503 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
SND1-210ENST00000483503 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
SND1-210ENST00000483503 USH2AO75445 5202 aa4.78□□□□□ -1.64
SND1-210ENST00000483503 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
SND1-210ENST00000483503 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
SND1-210ENST00000483503 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
SND1-210ENST00000483503 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
SND1-210ENST00000483503 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
SND1-210ENST00000483503 GPR98Q8WXG9 6306 aa4.62□□□□□ -1.67
SND1-210ENST00000483503 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
SND1-210ENST00000483503 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
SND1-210ENST00000483503 KRTAP19-6Q3LI70 58 aa4.54□□□□□ -1.68
SND1-210ENST00000483503 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
SND1-210ENST00000483503 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
SND1-210ENST00000483503 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
SND1-210ENST00000483503 KMT2DO14686 5537 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms