RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
PHGDH-205ENST00000482968 LOC100996750A0A140TA64 210 aa7.98□□□□□ -1.13
PHGDH-205ENST00000482968 KTN1-AS1Q86SY8 53 aa7.98□□□□□ -1.13
PHGDH-205ENST00000482968 KRTAP4-6Q9BYQ5 205 aa7.98□□□□□ -1.13
PHGDH-205ENST00000482968 SEC61BP60468 96 aaKnown RBP7.97□□□□□ -1.13
PHGDH-205ENST00000482968 SPTSSBQ8NFR3 76 aa7.97□□□□□ -1.13
PHGDH-205ENST00000482968 ACYP2P14621 99 aa7.94□□□□□ -1.14
PHGDH-205ENST00000482968 HRES1P13985 223 aa7.92□□□□□ -1.14
PHGDH-205ENST00000482968 LCA10Q71F78 164 aa7.92□□□□□ -1.14
PHGDH-205ENST00000482968 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
PHGDH-205ENST00000482968 IGKV2D-30A0A075B6S6 120 aa7.87□□□□□ -1.15
PHGDH-205ENST00000482968 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
PHGDH-205ENST00000482968 A6NN06 94 aa7.86□□□□□ -1.15
PHGDH-205ENST00000482968 SPINK7P58062 85 aa7.85□□□□□ -1.15
PHGDH-205ENST00000482968 A8MU10 97 aa7.84□□□□□ -1.15
PHGDH-205ENST00000482968 C7orf65Q6ZTY9 151 aa7.84□□□□□ -1.15
PHGDH-205ENST00000482968 MUC17Q685J3 4493 aa7.83□□□□□ -1.16
PHGDH-205ENST00000482968 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-205ENST00000482968 KRTAP4-1Q9BYQ7 146 aa7.82□□□□□ -1.16
PHGDH-205ENST00000482968 DMAC1Q96GE9 116 aa7.8□□□□□ -1.16
PHGDH-205ENST00000482968 UBR4Q5T4S7 5183 aa7.79□□□□□ -1.16
PHGDH-205ENST00000482968 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
PHGDH-205ENST00000482968 A0A1B0GU69 56 aa7.74□□□□□ -1.17
PHGDH-205ENST00000482968 MUC2Q02817 5179 aa7.73□□□□□ -1.17
PHGDH-205ENST00000482968 H3BS24 57 aa7.71□□□□□ -1.17
PHGDH-205ENST00000482968 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
PHGDH-205ENST00000482968 UQCR11O14957 56 aa7.66□□□□□ -1.18
PHGDH-205ENST00000482968 SPATA8Q6RVD6 105 aa7.65□□□□□ -1.18
PHGDH-205ENST00000482968 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
PHGDH-205ENST00000482968 COX6B2Q6YFQ2 88 aa7.59□□□□□ -1.2
PHGDH-205ENST00000482968 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
PHGDH-205ENST00000482968 KRTAP19-2Q3LHN2 52 aa7.54□□□□□ -1.2
PHGDH-205ENST00000482968 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
PHGDH-205ENST00000482968 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
PHGDH-205ENST00000482968 FAT4Q6V0I7 4981 aa7.41□□□□□ -1.22
PHGDH-205ENST00000482968 LINC01554Q52M75 96 aa7.4□□□□□ -1.23
PHGDH-205ENST00000482968 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
PHGDH-205ENST00000482968 S4R3F8 94 aa7.38□□□□□ -1.23
PHGDH-205ENST00000482968 MT1HP80294 61 aa7.34□□□□□ -1.23
PHGDH-205ENST00000482968 FLGP20930 4061 aaPredicted RBP7.34□□□□□ -1.24
PHGDH-205ENST00000482968 M0R2T5 61 aa7.3□□□□□ -1.24
PHGDH-205ENST00000482968 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
PHGDH-205ENST00000482968 K7ERS5 55 aa7.25□□□□□ -1.25
PHGDH-205ENST00000482968 A0A1B0GU33 70 aa7.25□□□□□ -1.25
PHGDH-205ENST00000482968 CSAG1Q6PB30 78 aa7.25□□□□□ -1.25
PHGDH-205ENST00000482968 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
PHGDH-205ENST00000482968 H0YAA0 97 aa7.17□□□□□ -1.26
PHGDH-205ENST00000482968 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
PHGDH-205ENST00000482968 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
PHGDH-205ENST00000482968 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
PHGDH-205ENST00000482968 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
PHGDH-205ENST00000482968 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
PHGDH-205ENST00000482968 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
PHGDH-205ENST00000482968 MT2AP02795 61 aa7□□□□□ -1.29
PHGDH-205ENST00000482968 P0C880 135 aa6.96□□□□□ -1.3
PHGDH-205ENST00000482968 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
PHGDH-205ENST00000482968 ROMO1P60602 79 aa6.96□□□□□ -1.3
PHGDH-205ENST00000482968 MT1FP04733 61 aa6.95□□□□□ -1.3
PHGDH-205ENST00000482968 LCE3BQ5TA77 95 aa6.9□□□□□ -1.31
PHGDH-205ENST00000482968 KRTAP4-12Q9BQ66 201 aa6.87□□□□□ -1.31
PHGDH-205ENST00000482968 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
PHGDH-205ENST00000482968 R4GN34 69 aa6.8□□□□□ -1.32
PHGDH-205ENST00000482968 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
PHGDH-205ENST00000482968 M0QZ58 72 aa6.77□□□□□ -1.33
PHGDH-205ENST00000482968 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
PHGDH-205ENST00000482968 A0A0D9SG42 100 aa6.74□□□□□ -1.33
PHGDH-205ENST00000482968 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
PHGDH-205ENST00000482968 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
PHGDH-205ENST00000482968 KRTAP9-9Q9BYP9 154 aa6.73□□□□□ -1.33
PHGDH-205ENST00000482968 KRTAP9-4Q9BYQ2 154 aa6.73□□□□□ -1.33
PHGDH-205ENST00000482968 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
PHGDH-205ENST00000482968 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
PHGDH-205ENST00000482968 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
PHGDH-205ENST00000482968 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
PHGDH-205ENST00000482968 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
PHGDH-205ENST00000482968 MT1BP07438 61 aa6.53□□□□□ -1.36
PHGDH-205ENST00000482968 USH2AO75445 5202 aa6.49□□□□□ -1.37
PHGDH-205ENST00000482968 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
PHGDH-205ENST00000482968 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
PHGDH-205ENST00000482968 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
PHGDH-205ENST00000482968 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
PHGDH-205ENST00000482968 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.37
PHGDH-205ENST00000482968 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
PHGDH-205ENST00000482968 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
PHGDH-205ENST00000482968 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
PHGDH-205ENST00000482968 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
PHGDH-205ENST00000482968 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
PHGDH-205ENST00000482968 KRTAP19-6Q3LI70 58 aa6.28□□□□□ -1.4
PHGDH-205ENST00000482968 MT1XP80297 61 aa6.26□□□□□ -1.41
PHGDH-205ENST00000482968 CRCT1Q9UGL9 99 aa6.26□□□□□ -1.41
PHGDH-205ENST00000482968 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
PHGDH-205ENST00000482968 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
PHGDH-205ENST00000482968 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
PHGDH-205ENST00000482968 KRTAP4-2Q9BYR5 136 aa6.18□□□□□ -1.42
PHGDH-205ENST00000482968 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
PHGDH-205ENST00000482968 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
PHGDH-205ENST00000482968 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
PHGDH-205ENST00000482968 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
PHGDH-205ENST00000482968 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
PHGDH-205ENST00000482968 TNP1P09430 55 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms