RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 LCA10Q71F78 164 aa9.45□□□□□ -0.9
SEMA4D-218ENST00000482128 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
SEMA4D-218ENST00000482128 CSAG1Q6PB30 78 aa9.39□□□□□ -0.91
SEMA4D-218ENST00000482128 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
SEMA4D-218ENST00000482128 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
SEMA4D-218ENST00000482128 CHKB-CPT1BH3BT56 60 aa9.32□□□□□ -0.92
SEMA4D-218ENST00000482128 ATP5EP56381 51 aaPredicted RBP9.31□□□□□ -0.92
SEMA4D-218ENST00000482128 PCP4P48539 62 aa9.27□□□□□ -0.93
SEMA4D-218ENST00000482128 TMEM258P61165 79 aa9.27□□□□□ -0.93
SEMA4D-218ENST00000482128 SPTSSBQ8NFR3 76 aa9.27□□□□□ -0.93
SEMA4D-218ENST00000482128 COA5Q86WW8 74 aa9.23□□□□□ -0.93
SEMA4D-218ENST00000482128 KRTAP9-8Q9BYQ0 159 aa9.21□□□□□ -0.94
SEMA4D-218ENST00000482128 MT2AP02795 61 aa9.17□□□□□ -0.94
SEMA4D-218ENST00000482128 H0YAA0 97 aa9.12□□□□□ -0.95
SEMA4D-218ENST00000482128 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
SEMA4D-218ENST00000482128 MT1FP04733 61 aa9.09□□□□□ -0.95
SEMA4D-218ENST00000482128 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
SEMA4D-218ENST00000482128 SERP1Q9Y6X1 66 aa8.97□□□□□ -0.97
SEMA4D-218ENST00000482128 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
SEMA4D-218ENST00000482128 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
SEMA4D-218ENST00000482128 KRTAP9-3Q9BYQ3 159 aa8.91□□□□□ -0.98
SEMA4D-218ENST00000482128 SEC61GP60059 68 aa8.9□□□□□ -0.98
SEMA4D-218ENST00000482128 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
SEMA4D-218ENST00000482128 P0C880 135 aa8.88□□□□□ -0.99
SEMA4D-218ENST00000482128 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
SEMA4D-218ENST00000482128 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
SEMA4D-218ENST00000482128 R4GN34 69 aa8.78□□□□□ -1
SEMA4D-218ENST00000482128 A0A1B0GU69 56 aa8.77□□□□□ -1.01
SEMA4D-218ENST00000482128 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
SEMA4D-218ENST00000482128 PRR15LQ9BU68 103 aa8.74□□□□□ -1.01
SEMA4D-218ENST00000482128 M0QZ58 72 aa8.73□□□□□ -1.01
SEMA4D-218ENST00000482128 RPS28P62857 69 aaKnown RBP8.73□□□□□ -1.01
SEMA4D-218ENST00000482128 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
SEMA4D-218ENST00000482128 LCE2BO14633 110 aa8.71□□□□□ -1.02
SEMA4D-218ENST00000482128 SMIM26A0A096LP01 95 aa8.67□□□□□ -1.02
SEMA4D-218ENST00000482128 V9GYY9 64 aa8.67□□□□□ -1.02
SEMA4D-218ENST00000482128 A0A1B0GU33 70 aa8.64□□□□□ -1.03
SEMA4D-218ENST00000482128 KRTAP19-8Q3LI54 63 aa8.61□□□□□ -1.03
SEMA4D-218ENST00000482128 Q5VV11 94 aa8.61□□□□□ -1.03
SEMA4D-218ENST00000482128 Q1T7F1 81 aa8.6□□□□□ -1.03
SEMA4D-218ENST00000482128 LINC01554Q52M75 96 aa8.57□□□□□ -1.04
SEMA4D-218ENST00000482128 USH2AO75445 5202 aa8.54□□□□□ -1.04
SEMA4D-218ENST00000482128 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
SEMA4D-218ENST00000482128 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
SEMA4D-218ENST00000482128 MT1BP07438 61 aa8.5□□□□□ -1.05
SEMA4D-218ENST00000482128 SPATA8Q6RVD6 105 aa8.47□□□□□ -1.05
SEMA4D-218ENST00000482128 FSIP2Q5CZC0 6907 aa8.46□□□□□ -1.06
SEMA4D-218ENST00000482128 PSPHP1O15172 72 aa8.46□□□□□ -1.06
SEMA4D-218ENST00000482128 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
SEMA4D-218ENST00000482128 UQCR11O14957 56 aa8.43□□□□□ -1.06
SEMA4D-218ENST00000482128 CRCT1Q9UGL9 99 aa8.43□□□□□ -1.06
SEMA4D-218ENST00000482128 A6NN06 94 aa8.42□□□□□ -1.06
SEMA4D-218ENST00000482128 A0A0D9SG42 100 aa8.39□□□□□ -1.07
SEMA4D-218ENST00000482128 KRTAP19-6Q3LI70 58 aa8.34□□□□□ -1.07
SEMA4D-218ENST00000482128 SSPOA2VEC9 5147 aa8.32□□□□□ -1.08
SEMA4D-218ENST00000482128 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
SEMA4D-218ENST00000482128 A8MU10 97 aa8.28□□□□□ -1.08
SEMA4D-218ENST00000482128 A6NED7 52 aa8.25□□□□□ -1.09
SEMA4D-218ENST00000482128 SPINT4Q6UDR6 99 aa8.24□□□□□ -1.09
SEMA4D-218ENST00000482128 PRO2289Q9P1D8 64 aa8.22□□□□□ -1.09
SEMA4D-218ENST00000482128 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
SEMA4D-218ENST00000482128 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
SEMA4D-218ENST00000482128 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
SEMA4D-218ENST00000482128 KRTAP12-2P59991 146 aa8.16□□□□□ -1.1
SEMA4D-218ENST00000482128 MT1XP80297 61 aa8.13□□□□□ -1.11
SEMA4D-218ENST00000482128 FCGBPQ9Y6R7 5405 aaPredicted RBP8.08□□□□□ -1.12
SEMA4D-218ENST00000482128 K7ERS5 55 aa8.07□□□□□ -1.12
SEMA4D-218ENST00000482128 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
SEMA4D-218ENST00000482128 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.82□□□□□ -1.16
SEMA4D-218ENST00000482128 BRK1Q8WUW1 75 aa7.8□□□□□ -1.16
SEMA4D-218ENST00000482128 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
SEMA4D-218ENST00000482128 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
SEMA4D-218ENST00000482128 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
SEMA4D-218ENST00000482128 MACF1Q9UPN3 7388 aaKnown RBP7.73□□□□□ -1.17
SEMA4D-218ENST00000482128 TNP1P09430 55 aa7.7□□□□□ -1.18
SEMA4D-218ENST00000482128 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
SEMA4D-218ENST00000482128 ROMO1P60602 79 aa7.59□□□□□ -1.19
SEMA4D-218ENST00000482128 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
SEMA4D-218ENST00000482128 KRTAP8-1Q8IUC2 63 aa7.57□□□□□ -1.2
SEMA4D-218ENST00000482128 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
SEMA4D-218ENST00000482128 KRTAP9-7A8MTY7 169 aa7.55□□□□□ -1.2
SEMA4D-218ENST00000482128 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
SEMA4D-218ENST00000482128 KRTAP6-3Q3LI67 103 aa7.53□□□□□ -1.2
SEMA4D-218ENST00000482128 KMT2DO14686 5537 aa7.49□□□□□ -1.21
SEMA4D-218ENST00000482128 KRTAP5-9P26371 169 aa7.43□□□□□ -1.22
SEMA4D-218ENST00000482128 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
SEMA4D-218ENST00000482128 PRO0628Q9UI54 55 aa7.39□□□□□ -1.23
SEMA4D-218ENST00000482128 SPRR2FQ96RM1 72 aa7.38□□□□□ -1.23
SEMA4D-218ENST00000482128 PMAIP1Q13794 54 aa7.37□□□□□ -1.23
SEMA4D-218ENST00000482128 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
SEMA4D-218ENST00000482128 KRTAP19-5Q3LI72 72 aa7.26□□□□□ -1.25
SEMA4D-218ENST00000482128 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
SEMA4D-218ENST00000482128 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
SEMA4D-218ENST00000482128 MT1EP04732 61 aa7.18□□□□□ -1.26
SEMA4D-218ENST00000482128 KRTAP12-3P60328 96 aa7.15□□□□□ -1.26
SEMA4D-218ENST00000482128 SPRR2EP22531 72 aa7.12□□□□□ -1.27
SEMA4D-218ENST00000482128 SPRR2BP35325 72 aa7.12□□□□□ -1.27
SEMA4D-218ENST00000482128 SPRR2AP35326 72 aa7.12□□□□□ -1.27
SEMA4D-218ENST00000482128 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
SEMA4D-218ENST00000482128 NEBP20929 6669 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms