RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
RXRB-203ENST00000481441 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
RXRB-203ENST00000481441 C5orf47Q569G3 176 aa8.03□□□□□ -1.12
RXRB-203ENST00000481441 SERP2Q8N6R1 65 aa8.03□□□□□ -1.12
RXRB-203ENST00000481441 KRTAP5-9P26371 169 aa8□□□□□ -1.13
RXRB-203ENST00000481441 MP68P56378 58 aa8□□□□□ -1.13
RXRB-203ENST00000481441 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
RXRB-203ENST00000481441 IGKV2-30P06310 120 aa7.99□□□□□ -1.13
RXRB-203ENST00000481441 ANAPC13Q9BS18 74 aa7.99□□□□□ -1.13
RXRB-203ENST00000481441 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
RXRB-203ENST00000481441 COX7CP15954 63 aa7.96□□□□□ -1.14
RXRB-203ENST00000481441 H1FX-AS1Q4G0G2 97 aa7.96□□□□□ -1.14
RXRB-203ENST00000481441 C7orf65Q6ZTY9 151 aa7.96□□□□□ -1.14
RXRB-203ENST00000481441 C1orf64Q8NEQ6 169 aa7.96□□□□□ -1.14
RXRB-203ENST00000481441 LOC101927531A0A1B0GV80 90 aa7.95□□□□□ -1.14
RXRB-203ENST00000481441 H3BPC8 53 aa7.94□□□□□ -1.14
RXRB-203ENST00000481441 MT1BP07438 61 aa7.94□□□□□ -1.14
RXRB-203ENST00000481441 KMT2DO14686 5537 aa7.94□□□□□ -1.14
RXRB-203ENST00000481441 CYP4F30PQ9H0H9 118 aa7.92□□□□□ -1.14
RXRB-203ENST00000481441 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
RXRB-203ENST00000481441 MDN1Q9NU22 5596 aa7.91□□□□□ -1.14
RXRB-203ENST00000481441 PCP4P48539 62 aa7.9□□□□□ -1.14
RXRB-203ENST00000481441 SNURFQ9Y675 71 aa7.9□□□□□ -1.14
RXRB-203ENST00000481441 KRTAP2-3P0C7H8 128 aa7.87□□□□□ -1.15
RXRB-203ENST00000481441 KRTAP2-4Q9BYR9 128 aa7.87□□□□□ -1.15
RXRB-203ENST00000481441 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
RXRB-203ENST00000481441 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
RXRB-203ENST00000481441 CCDC179H3BU77 68 aa7.84□□□□□ -1.15
RXRB-203ENST00000481441 Q5VV11 94 aa7.84□□□□□ -1.15
RXRB-203ENST00000481441 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
RXRB-203ENST00000481441 C4orf26Q17RF5 130 aa7.79□□□□□ -1.16
RXRB-203ENST00000481441 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
RXRB-203ENST00000481441 SPRR2GQ9BYE4 73 aa7.77□□□□□ -1.17
RXRB-203ENST00000481441 NDUFC1O43677 76 aa7.72□□□□□ -1.17
RXRB-203ENST00000481441 H7BZZ5 65 aa7.71□□□□□ -1.18
RXRB-203ENST00000481441 KRTAP3-1Q9BYR8 98 aa7.7□□□□□ -1.18
RXRB-203ENST00000481441 SPANXA2-OT1Q8N9U9 137 aa7.65□□□□□ -1.18
RXRB-203ENST00000481441 SPRR2EP22531 72 aa7.62□□□□□ -1.19
RXRB-203ENST00000481441 SPRR2BP35325 72 aa7.62□□□□□ -1.19
RXRB-203ENST00000481441 SPRR2AP35326 72 aa7.62□□□□□ -1.19
RXRB-203ENST00000481441 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
RXRB-203ENST00000481441 A8MUN3 132 aa7.61□□□□□ -1.19
RXRB-203ENST00000481441 SPRR2FQ96RM1 72 aa7.59□□□□□ -1.19
RXRB-203ENST00000481441 KRTAP2-2Q9BYT5 123 aa7.58□□□□□ -1.2
RXRB-203ENST00000481441 KRTAP2-1Q9BYU5 128 aa7.58□□□□□ -1.2
RXRB-203ENST00000481441 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
RXRB-203ENST00000481441 TMEM258P61165 79 aa7.53□□□□□ -1.2
RXRB-203ENST00000481441 ACYP2P14621 99 aa7.52□□□□□ -1.2
RXRB-203ENST00000481441 S4R3F8 94 aa7.52□□□□□ -1.21
RXRB-203ENST00000481441 ATP5EP56381 51 aaPredicted RBP7.5□□□□□ -1.21
RXRB-203ENST00000481441 LCA10Q71F78 164 aa7.48□□□□□ -1.21
RXRB-203ENST00000481441 LCE1AQ5T7P2 110 aa7.47□□□□□ -1.21
RXRB-203ENST00000481441 COA5Q86WW8 74 aa7.44□□□□□ -1.22
RXRB-203ENST00000481441 CHKB-CPT1BH3BT56 60 aa7.41□□□□□ -1.22
RXRB-203ENST00000481441 CRIPTQ9P021 101 aa7.39□□□□□ -1.23
RXRB-203ENST00000481441 SPRR2DP22532 72 aa7.37□□□□□ -1.23
RXRB-203ENST00000481441 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
RXRB-203ENST00000481441 SPTSSBQ8NFR3 76 aa7.3□□□□□ -1.24
RXRB-203ENST00000481441 SERP1Q9Y6X1 66 aa7.3□□□□□ -1.24
RXRB-203ENST00000481441 MT1XP80297 61 aa7.29□□□□□ -1.24
RXRB-203ENST00000481441 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
RXRB-203ENST00000481441 GPR98Q8WXG9 6306 aa7.26□□□□□ -1.25
RXRB-203ENST00000481441 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
RXRB-203ENST00000481441 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
RXRB-203ENST00000481441 KRTAP4-8A0A0G2JLE6 195 aa7.17□□□□□ -1.26
RXRB-203ENST00000481441 H0YAA0 97 aa7.17□□□□□ -1.26
RXRB-203ENST00000481441 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
RXRB-203ENST00000481441 RPS28P62857 69 aaKnown RBP7.16□□□□□ -1.26
RXRB-203ENST00000481441 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.26
RXRB-203ENST00000481441 SEC61GP60059 68 aa7.12□□□□□ -1.27
RXRB-203ENST00000481441 P0C880 135 aa7.08□□□□□ -1.28
RXRB-203ENST00000481441 PLAC4Q8WY50 150 aa7.08□□□□□ -1.28
RXRB-203ENST00000481441 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
RXRB-203ENST00000481441 LINC01558Q9Y6Z2 57 aa7.05□□□□□ -1.28
RXRB-203ENST00000481441 A0A1B0GU69 56 aa7.02□□□□□ -1.28
RXRB-203ENST00000481441 Q1T7F1 81 aa7□□□□□ -1.29
RXRB-203ENST00000481441 V9GYY9 64 aa6.99□□□□□ -1.29
RXRB-203ENST00000481441 DSTQ03001 7570 aaKnown RBP6.98□□□□□ -1.29
RXRB-203ENST00000481441 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
RXRB-203ENST00000481441 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
RXRB-203ENST00000481441 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
RXRB-203ENST00000481441 A0A1B0GU33 70 aa6.9□□□□□ -1.3
RXRB-203ENST00000481441 PSPHP1O15172 72 aa6.9□□□□□ -1.3
RXRB-203ENST00000481441 R4GN34 69 aa6.9□□□□□ -1.3
RXRB-203ENST00000481441 M0QZ58 72 aa6.89□□□□□ -1.31
RXRB-203ENST00000481441 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
RXRB-203ENST00000481441 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
RXRB-203ENST00000481441 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
RXRB-203ENST00000481441 LINC01554Q52M75 96 aa6.77□□□□□ -1.32
RXRB-203ENST00000481441 UQCR11O14957 56 aa6.76□□□□□ -1.33
RXRB-203ENST00000481441 A0A0D9SG42 100 aa6.7□□□□□ -1.34
RXRB-203ENST00000481441 A6NED7 52 aa6.68□□□□□ -1.34
RXRB-203ENST00000481441 A8MU10 97 aa6.68□□□□□ -1.34
RXRB-203ENST00000481441 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
RXRB-203ENST00000481441 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
RXRB-203ENST00000481441 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
RXRB-203ENST00000481441 PRO0628Q9UI54 55 aa6.61□□□□□ -1.35
RXRB-203ENST00000481441 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
RXRB-203ENST00000481441 HMCN1Q96RW7 5635 aa6.57□□□□□ -1.36
RXRB-203ENST00000481441 SPINT4Q6UDR6 99 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms