RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 RNF213Q63HN8 5207 aa7.3□□□□□ -1.24
SNRNP200-205ENST00000480835 LCA10Q71F78 164 aa7.29□□□□□ -1.24
SNRNP200-205ENST00000480835 UBR4Q5T4S7 5183 aa7.27□□□□□ -1.25
SNRNP200-205ENST00000480835 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
SNRNP200-205ENST00000480835 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
SNRNP200-205ENST00000480835 V9GYY9 64 aa7.22□□□□□ -1.25
SNRNP200-205ENST00000480835 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
SNRNP200-205ENST00000480835 Q1T7F1 81 aa7.19□□□□□ -1.26
SNRNP200-205ENST00000480835 LINC01558Q9Y6Z2 57 aa7.18□□□□□ -1.26
SNRNP200-205ENST00000480835 MUC2Q02817 5179 aa7.17□□□□□ -1.26
SNRNP200-205ENST00000480835 FLGP20930 4061 aaPredicted RBP7.14□□□□□ -1.27
SNRNP200-205ENST00000480835 SEC61GP60059 68 aa7.11□□□□□ -1.27
SNRNP200-205ENST00000480835 A0A1B0GU69 56 aa7.09□□□□□ -1.27
SNRNP200-205ENST00000480835 MT1HP80294 61 aa7.09□□□□□ -1.27
SNRNP200-205ENST00000480835 PRR15LQ9BU68 103 aa7.09□□□□□ -1.27
SNRNP200-205ENST00000480835 H0YAA0 97 aa7.07□□□□□ -1.28
SNRNP200-205ENST00000480835 M0R2T5 61 aa7.04□□□□□ -1.28
SNRNP200-205ENST00000480835 PSPHP1O15172 72 aa7.01□□□□□ -1.29
SNRNP200-205ENST00000480835 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
SNRNP200-205ENST00000480835 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
SNRNP200-205ENST00000480835 Q5VV11 94 aa6.97□□□□□ -1.29
SNRNP200-205ENST00000480835 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
SNRNP200-205ENST00000480835 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
SNRNP200-205ENST00000480835 P0C880 135 aa6.92□□□□□ -1.3
SNRNP200-205ENST00000480835 A0A1B0GU33 70 aa6.91□□□□□ -1.3
SNRNP200-205ENST00000480835 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
SNRNP200-205ENST00000480835 UQCR11O14957 56 aa6.87□□□□□ -1.31
SNRNP200-205ENST00000480835 A6NED7 52 aa6.83□□□□□ -1.32
SNRNP200-205ENST00000480835 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
SNRNP200-205ENST00000480835 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
SNRNP200-205ENST00000480835 M0QZ58 72 aa6.81□□□□□ -1.32
SNRNP200-205ENST00000480835 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
SNRNP200-205ENST00000480835 MT2AP02795 61 aa6.8□□□□□ -1.32
SNRNP200-205ENST00000480835 R4GN34 69 aa6.77□□□□□ -1.33
SNRNP200-205ENST00000480835 MIR22HGQ0VDD5 57 aa6.76□□□□□ -1.33
SNRNP200-205ENST00000480835 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
SNRNP200-205ENST00000480835 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
SNRNP200-205ENST00000480835 MT1FP04733 61 aa6.74□□□□□ -1.33
SNRNP200-205ENST00000480835 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
SNRNP200-205ENST00000480835 CDC42SE1Q9NRR8 79 aa6.72□□□□□ -1.33
SNRNP200-205ENST00000480835 BRK1Q8WUW1 75 aa6.66□□□□□ -1.34
SNRNP200-205ENST00000480835 SPRR2GQ9BYE4 73 aa6.64□□□□□ -1.35
SNRNP200-205ENST00000480835 A8MU10 97 aa6.62□□□□□ -1.35
SNRNP200-205ENST00000480835 A0A0D9SG42 100 aa6.6□□□□□ -1.35
SNRNP200-205ENST00000480835 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
SNRNP200-205ENST00000480835 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
SNRNP200-205ENST00000480835 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.35
SNRNP200-205ENST00000480835 A6NN06 94 aa6.57□□□□□ -1.36
SNRNP200-205ENST00000480835 K7ERS5 55 aa6.53□□□□□ -1.36
SNRNP200-205ENST00000480835 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
SNRNP200-205ENST00000480835 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
SNRNP200-205ENST00000480835 PRO0628Q9UI54 55 aa6.49□□□□□ -1.37
SNRNP200-205ENST00000480835 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
SNRNP200-205ENST00000480835 KRTAP12-2P59991 146 aa6.45□□□□□ -1.38
SNRNP200-205ENST00000480835 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
SNRNP200-205ENST00000480835 LCE2BO14633 110 aa6.39□□□□□ -1.39
SNRNP200-205ENST00000480835 MT1BP07438 61 aa6.38□□□□□ -1.39
SNRNP200-205ENST00000480835 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.39
SNRNP200-205ENST00000480835 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
SNRNP200-205ENST00000480835 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
SNRNP200-205ENST00000480835 ROMO1P60602 79 aa6.2□□□□□ -1.42
SNRNP200-205ENST00000480835 USH2AO75445 5202 aa6.18□□□□□ -1.42
SNRNP200-205ENST00000480835 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
SNRNP200-205ENST00000480835 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.42
SNRNP200-205ENST00000480835 MT1XP80297 61 aa6.14□□□□□ -1.43
SNRNP200-205ENST00000480835 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
SNRNP200-205ENST00000480835 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
SNRNP200-205ENST00000480835 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
SNRNP200-205ENST00000480835 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
SNRNP200-205ENST00000480835 TNP1P09430 55 aa6.03□□□□□ -1.44
SNRNP200-205ENST00000480835 KTN1-AS1Q86SY8 53 aa6.03□□□□□ -1.44
SNRNP200-205ENST00000480835 SSPOA2VEC9 5147 aa5.97□□□□□ -1.45
SNRNP200-205ENST00000480835 PRAC1Q96KF2 57 aa5.88□□□□□ -1.47
SNRNP200-205ENST00000480835 CRCT1Q9UGL9 99 aa5.88□□□□□ -1.47
SNRNP200-205ENST00000480835 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
SNRNP200-205ENST00000480835 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
SNRNP200-205ENST00000480835 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
SNRNP200-205ENST00000480835 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
SNRNP200-205ENST00000480835 FCGBPQ9Y6R7 5405 aaPredicted RBP5.74□□□□□ -1.49
SNRNP200-205ENST00000480835 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
SNRNP200-205ENST00000480835 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
SNRNP200-205ENST00000480835 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
SNRNP200-205ENST00000480835 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
SNRNP200-205ENST00000480835 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
SNRNP200-205ENST00000480835 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
SNRNP200-205ENST00000480835 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
SNRNP200-205ENST00000480835 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
SNRNP200-205ENST00000480835 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
SNRNP200-205ENST00000480835 KMT2DO14686 5537 aa5.49□□□□□ -1.53
SNRNP200-205ENST00000480835 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
SNRNP200-205ENST00000480835 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
SNRNP200-205ENST00000480835 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
SNRNP200-205ENST00000480835 MT1EP04732 61 aa5.4□□□□□ -1.54
SNRNP200-205ENST00000480835 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
SNRNP200-205ENST00000480835 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
SNRNP200-205ENST00000480835 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
SNRNP200-205ENST00000480835 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
SNRNP200-205ENST00000480835 MT1LQ93083 61 aa5.28□□□□□ -1.56
SNRNP200-205ENST00000480835 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
SNRNP200-205ENST00000480835 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms