RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 H1FX-AS1Q4G0G2 97 aa14.02□□□□□ -0.16
TNFRSF25-213ENST00000480393 S4R3F8 94 aa14.02□□□□□ -0.16
TNFRSF25-213ENST00000480393 LCA10Q71F78 164 aa13.97□□□□□ -0.17
TNFRSF25-213ENST00000480393 BRK1Q8WUW1 75 aa13.96□□□□□ -0.17
TNFRSF25-213ENST00000480393 SEC61GP60059 68 aa13.94□□□□□ -0.18
TNFRSF25-213ENST00000480393 KRTAP4-1Q9BYQ7 146 aa13.93□□□□□ -0.18
TNFRSF25-213ENST00000480393 A6NED7 52 aa13.92□□□□□ -0.18
TNFRSF25-213ENST00000480393 HERC1Q15751 4861 aa13.9□□□□□ -0.18
TNFRSF25-213ENST00000480393 MUC17Q685J3 4493 aa13.87□□□□□ -0.19
TNFRSF25-213ENST00000480393 KRTAP3-3Q9BYR6 98 aa13.87□□□□□ -0.19
TNFRSF25-213ENST00000480393 HMCN2Q8NDA2 5059 aa13.84□□□□□ -0.19
TNFRSF25-213ENST00000480393 PRO0628Q9UI54 55 aa13.73□□□□□ -0.21
TNFRSF25-213ENST00000480393 UQCR11O14957 56 aa13.67□□□□□ -0.22
TNFRSF25-213ENST00000480393 CDC42SE1Q9NRR8 79 aa13.67□□□□□ -0.22
TNFRSF25-213ENST00000480393 CSAG1Q6PB30 78 aa13.64□□□□□ -0.23
TNFRSF25-213ENST00000480393 A8MU10 97 aa13.61□□□□□ -0.23
TNFRSF25-213ENST00000480393 MIR22HGQ0VDD5 57 aa13.55□□□□□ -0.24
TNFRSF25-213ENST00000480393 A0A1B0GU33 70 aa13.54□□□□□ -0.24
TNFRSF25-213ENST00000480393 KRTAP19-2Q3LHN2 52 aa13.54□□□□□ -0.24
TNFRSF25-213ENST00000480393 SPATA8Q6RVD6 105 aa13.5□□□□□ -0.25
TNFRSF25-213ENST00000480393 KRTAP10-6P60371 365 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF25-213ENST00000480393 KRTAP3-2Q9BYR7 98 aa13.44□□□□□ -0.26
TNFRSF25-213ENST00000480393 ADM2Q7Z4H4 148 aa13.42□□□□□ -0.26
TNFRSF25-213ENST00000480393 H0YAA0 97 aa13.35□□□□□ -0.27
TNFRSF25-213ENST00000480393 P0C880 135 aa13.35□□□□□ -0.27
TNFRSF25-213ENST00000480393 MUC2Q02817 5179 aa13.31□□□□□ -0.28
TNFRSF25-213ENST00000480393 PMAIP1Q13794 54 aa13.18□□□□□ -0.3
TNFRSF25-213ENST00000480393 UBR4Q5T4S7 5183 aa13.17□□□□□ -0.3
TNFRSF25-213ENST00000480393 FLGP20930 4061 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF25-213ENST00000480393 KRTAP13-4Q3LI77 160 aa13.15□□□□□ -0.3
TNFRSF25-213ENST00000480393 RNF213Q63HN8 5207 aa13.15□□□□□ -0.3
TNFRSF25-213ENST00000480393 LCE2CQ5TA81 110 aa13.14□□□□□ -0.31
TNFRSF25-213ENST00000480393 SVIPQ8NHG7 77 aa13.08□□□□□ -0.32
TNFRSF25-213ENST00000480393 A6NN06 94 aa13.03□□□□□ -0.32
TNFRSF25-213ENST00000480393 M0QZ58 72 aa13.03□□□□□ -0.32
TNFRSF25-213ENST00000480393 A0A0D9SG42 100 aa13.02□□□□□ -0.33
TNFRSF25-213ENST00000480393 K7ERS5 55 aa12.93□□□□□ -0.34
TNFRSF25-213ENST00000480393 R4GN34 69 aa12.93□□□□□ -0.34
TNFRSF25-213ENST00000480393 M0R2T5 61 aa12.92□□□□□ -0.34
TNFRSF25-213ENST00000480393 MT1HP80294 61 aa12.91□□□□□ -0.34
TNFRSF25-213ENST00000480393 LORP23490 312 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF25-213ENST00000480393 FAT4Q6V0I7 4981 aa12.75□□□□□ -0.37
TNFRSF25-213ENST00000480393 LINC01554Q52M75 96 aa12.75□□□□□ -0.37
TNFRSF25-213ENST00000480393 KTN1-AS1Q86SY8 53 aa12.7□□□□□ -0.38
TNFRSF25-213ENST00000480393 SPINT4Q6UDR6 99 aa12.68□□□□□ -0.38
TNFRSF25-213ENST00000480393 CRIPTQ9P021 101 aa12.68□□□□□ -0.38
TNFRSF25-213ENST00000480393 KRTAP12-1P59990 96 aa12.66□□□□□ -0.38
TNFRSF25-213ENST00000480393 KRTAP12-2P59991 146 aa12.66□□□□□ -0.38
TNFRSF25-213ENST00000480393 MT2AP02795 61 aa12.46□□□□□ -0.41
TNFRSF25-213ENST00000480393 KRTAP10-10P60014 251 aa12.43□□□□□ -0.42
TNFRSF25-213ENST00000480393 KRTAP9-8Q9BYQ0 159 aa12.43□□□□□ -0.42
TNFRSF25-213ENST00000480393 MT1FP04733 61 aa12.4□□□□□ -0.42
TNFRSF25-213ENST00000480393 ROMO1P60602 79 aa12.4□□□□□ -0.43
TNFRSF25-213ENST00000480393 PRAC1Q96KF2 57 aa12.34□□□□□ -0.43
TNFRSF25-213ENST00000480393 SPRR2GQ9BYE4 73 aa12.31□□□□□ -0.44
TNFRSF25-213ENST00000480393 KRTAP19-1Q8IUB9 90 aa12.25□□□□□ -0.45
TNFRSF25-213ENST00000480393 CAMK2N1Q7Z7J9 78 aa12.18□□□□□ -0.46
TNFRSF25-213ENST00000480393 LCE2AQ5TA79 106 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF25-213ENST00000480393 PLAC4Q8WY50 150 aa12.06□□□□□ -0.48
TNFRSF25-213ENST00000480393 KRTAP9-3Q9BYQ3 159 aa11.98□□□□□ -0.49
TNFRSF25-213ENST00000480393 KRTAP25-1Q3LHN0 102 aa11.97□□□□□ -0.49
TNFRSF25-213ENST00000480393 C10orf95Q9H7T3 257 aa11.97□□□□□ -0.49
TNFRSF25-213ENST00000480393 KRTAP19-8Q3LI54 63 aa11.94□□□□□ -0.5
TNFRSF25-213ENST00000480393 MT1BP07438 61 aa11.77□□□□□ -0.52
TNFRSF25-213ENST00000480393 LCE2BO14633 110 aa11.61□□□□□ -0.55
TNFRSF25-213ENST00000480393 TNP1P09430 55 aa11.59□□□□□ -0.55
TNFRSF25-213ENST00000480393 MT1XP80297 61 aa11.46□□□□□ -0.57
TNFRSF25-213ENST00000480393 KRTAP10-5P60370 271 aa11.45□□□□□ -0.58
TNFRSF25-213ENST00000480393 PP632Q6XCG6 107 aa11.38□□□□□ -0.59
TNFRSF25-213ENST00000480393 PRO2289Q9P1D8 64 aa11.37□□□□□ -0.59
TNFRSF25-213ENST00000480393 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF25-213ENST00000480393 KRTAP9-2Q9BYQ4 174 aa11.29□□□□□ -0.6
TNFRSF25-213ENST00000480393 KRTAP23-1A1A580 65 aa11.24□□□□□ -0.61
TNFRSF25-213ENST00000480393 USH2AO75445 5202 aa11.18□□□□□ -0.62
TNFRSF25-213ENST00000480393 LCE3AQ5TA76 89 aa11.05□□□□□ -0.64
TNFRSF25-213ENST00000480393 KRTAP10-7P60409 375 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF25-213ENST00000480393 KRTAP10-12P60413 245 aa11.02□□□□□ -0.65
TNFRSF25-213ENST00000480393 FSIP2Q5CZC0 6907 aa10.91□□□□□ -0.66
TNFRSF25-213ENST00000480393 SSPOA2VEC9 5147 aa10.83□□□□□ -0.68
TNFRSF25-213ENST00000480393 KRTAP19-6Q3LI70 58 aa10.83□□□□□ -0.68
TNFRSF25-213ENST00000480393 KRTAP8-1Q8IUC2 63 aa10.78□□□□□ -0.68
TNFRSF25-213ENST00000480393 CRCT1Q9UGL9 99 aa10.78□□□□□ -0.68
TNFRSF25-213ENST00000480393 KRTAP9-6A0A140TA67 174 aa10.7□□□□□ -0.7
TNFRSF25-213ENST00000480393 KRTAP15-1Q3LI76 137 aa10.61□□□□□ -0.71
TNFRSF25-213ENST00000480393 KRTAP12-3P60328 96 aa10.59□□□□□ -0.71
TNFRSF25-213ENST00000480393 KRTAP4-8A0A0G2JLE6 195 aa10.53□□□□□ -0.72
TNFRSF25-213ENST00000480393 KRTAP4-8Q9BYQ9 185 aa10.53□□□□□ -0.72
TNFRSF25-213ENST00000480393 KRTAP19-5Q3LI72 72 aa10.45□□□□□ -0.74
TNFRSF25-213ENST00000480393 KMT2DO14686 5537 aa10.35□□□□□ -0.75
TNFRSF25-213ENST00000480393 FCGBPQ9Y6R7 5405 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF25-213ENST00000480393 KRTAP19-7Q3SYF9 63 aa10.2□□□□□ -0.78
TNFRSF25-213ENST00000480393 SPRR5A0A1B0GTR4 108 aa10.13□□□□□ -0.79
TNFRSF25-213ENST00000480393 MT1EP04732 61 aa10.04□□□□□ -0.8
TNFRSF25-213ENST00000480393 LUZP6Q538Z0 58 aa10.02□□□□□ -0.8
TNFRSF25-213ENST00000480393 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF25-213ENST00000480393 NDUFAF8A1L188 74 aa9.96□□□□□ -0.82
TNFRSF25-213ENST00000480393 MACF1Q9UPN3 7388 aaKnown RBP9.91□□□□□ -0.82
TNFRSF25-213ENST00000480393 LCE3CQ5T5A8 94 aa9.9□□□□□ -0.82
TNFRSF25-213ENST00000480393 MT1LQ93083 61 aa9.87□□□□□ -0.83
TNFRSF25-213ENST00000480393 KRTAP19-4Q3LI73 84 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms