RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
NUDCD3-207ENST00000478769 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
NUDCD3-207ENST00000478769 MT2AP02795 61 aa6.46□□□□□ -1.38
NUDCD3-207ENST00000478769 CYSTM1Q9H1C7 97 aa6.44□□□□□ -1.38
NUDCD3-207ENST00000478769 MT1FP04733 61 aa6.41□□□□□ -1.38
NUDCD3-207ENST00000478769 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
NUDCD3-207ENST00000478769 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.38
NUDCD3-207ENST00000478769 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
NUDCD3-207ENST00000478769 H7BZZ5 65 aa6.37□□□□□ -1.39
NUDCD3-207ENST00000478769 NDUFC1O43677 76 aa6.37□□□□□ -1.39
NUDCD3-207ENST00000478769 ACYP2P14621 99 aa6.35□□□□□ -1.39
NUDCD3-207ENST00000478769 KRTAP10-10P60014 251 aa6.35□□□□□ -1.39
NUDCD3-207ENST00000478769 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
NUDCD3-207ENST00000478769 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
NUDCD3-207ENST00000478769 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
NUDCD3-207ENST00000478769 H0YAA0 97 aa6.23□□□□□ -1.41
NUDCD3-207ENST00000478769 COA5Q86WW8 74 aa6.23□□□□□ -1.41
NUDCD3-207ENST00000478769 USH2AO75445 5202 aa6.19□□□□□ -1.42
NUDCD3-207ENST00000478769 ADM2Q7Z4H4 148 aa6.19□□□□□ -1.42
NUDCD3-207ENST00000478769 SPTSSBQ8NFR3 76 aa6.19□□□□□ -1.42
NUDCD3-207ENST00000478769 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
NUDCD3-207ENST00000478769 TMEM258P61165 79 aa6.14□□□□□ -1.43
NUDCD3-207ENST00000478769 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
NUDCD3-207ENST00000478769 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
NUDCD3-207ENST00000478769 P0C880 135 aa6.12□□□□□ -1.43
NUDCD3-207ENST00000478769 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
NUDCD3-207ENST00000478769 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
NUDCD3-207ENST00000478769 SSPOA2VEC9 5147 aa6.09□□□□□ -1.44
NUDCD3-207ENST00000478769 PCP4P48539 62 aa6.06□□□□□ -1.44
NUDCD3-207ENST00000478769 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
NUDCD3-207ENST00000478769 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
NUDCD3-207ENST00000478769 KRTAP4-6Q9BYQ5 205 aa6.01□□□□□ -1.45
NUDCD3-207ENST00000478769 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
NUDCD3-207ENST00000478769 R4GN34 69 aa5.99□□□□□ -1.45
NUDCD3-207ENST00000478769 MT1BP07438 61 aa5.98□□□□□ -1.45
NUDCD3-207ENST00000478769 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
NUDCD3-207ENST00000478769 M0QZ58 72 aa5.97□□□□□ -1.45
NUDCD3-207ENST00000478769 Q5VV11 94 aa5.96□□□□□ -1.46
NUDCD3-207ENST00000478769 SERP1Q9Y6X1 66 aa5.95□□□□□ -1.46
NUDCD3-207ENST00000478769 SEC61GP60059 68 aa5.92□□□□□ -1.46
NUDCD3-207ENST00000478769 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
NUDCD3-207ENST00000478769 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
NUDCD3-207ENST00000478769 A0A1B0GU69 56 aa5.87□□□□□ -1.47
NUDCD3-207ENST00000478769 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
NUDCD3-207ENST00000478769 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
NUDCD3-207ENST00000478769 LINC01558Q9Y6Z2 57 aa5.84□□□□□ -1.47
NUDCD3-207ENST00000478769 A0A1B0GU33 70 aa5.82□□□□□ -1.48
NUDCD3-207ENST00000478769 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
NUDCD3-207ENST00000478769 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
NUDCD3-207ENST00000478769 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
NUDCD3-207ENST00000478769 A6NN06 94 aa5.74□□□□□ -1.49
NUDCD3-207ENST00000478769 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
NUDCD3-207ENST00000478769 A0A0D9SG42 100 aa5.72□□□□□ -1.49
NUDCD3-207ENST00000478769 RPS28P62857 69 aaKnown RBP5.72□□□□□ -1.49
NUDCD3-207ENST00000478769 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
NUDCD3-207ENST00000478769 Q1T7F1 81 aa5.71□□□□□ -1.5
NUDCD3-207ENST00000478769 MT1XP80297 61 aa5.7□□□□□ -1.5
NUDCD3-207ENST00000478769 V9GYY9 64 aa5.69□□□□□ -1.5
NUDCD3-207ENST00000478769 A8MU10 97 aa5.65□□□□□ -1.5
NUDCD3-207ENST00000478769 PSPHP1O15172 72 aa5.65□□□□□ -1.5
NUDCD3-207ENST00000478769 PRO2289Q9P1D8 64 aa5.63□□□□□ -1.51
NUDCD3-207ENST00000478769 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
NUDCD3-207ENST00000478769 UQCR11O14957 56 aa5.61□□□□□ -1.51
NUDCD3-207ENST00000478769 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.6□□□□□ -1.51
NUDCD3-207ENST00000478769 MACF1Q9UPN3 7388 aaKnown RBP5.59□□□□□ -1.51
NUDCD3-207ENST00000478769 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
NUDCD3-207ENST00000478769 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
NUDCD3-207ENST00000478769 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
NUDCD3-207ENST00000478769 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
NUDCD3-207ENST00000478769 A6NED7 52 aa5.47□□□□□ -1.53
NUDCD3-207ENST00000478769 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
NUDCD3-207ENST00000478769 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
NUDCD3-207ENST00000478769 KMT2DO14686 5537 aa5.44□□□□□ -1.54
NUDCD3-207ENST00000478769 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
NUDCD3-207ENST00000478769 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
NUDCD3-207ENST00000478769 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
NUDCD3-207ENST00000478769 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
NUDCD3-207ENST00000478769 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
NUDCD3-207ENST00000478769 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
NUDCD3-207ENST00000478769 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
NUDCD3-207ENST00000478769 K7ERS5 55 aa5.31□□□□□ -1.56
NUDCD3-207ENST00000478769 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
NUDCD3-207ENST00000478769 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
NUDCD3-207ENST00000478769 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
NUDCD3-207ENST00000478769 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
NUDCD3-207ENST00000478769 TNP1P09430 55 aa5.21□□□□□ -1.58
NUDCD3-207ENST00000478769 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
NUDCD3-207ENST00000478769 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
NUDCD3-207ENST00000478769 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
NUDCD3-207ENST00000478769 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
NUDCD3-207ENST00000478769 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
NUDCD3-207ENST00000478769 NEBP20929 6669 aa5.13□□□□□ -1.59
NUDCD3-207ENST00000478769 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
NUDCD3-207ENST00000478769 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
NUDCD3-207ENST00000478769 BRK1Q8WUW1 75 aa5.12□□□□□ -1.59
NUDCD3-207ENST00000478769 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
NUDCD3-207ENST00000478769 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
NUDCD3-207ENST00000478769 ROMO1P60602 79 aa5.07□□□□□ -1.6
NUDCD3-207ENST00000478769 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
NUDCD3-207ENST00000478769 MT1EP04732 61 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms