RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	CHKB-CPT1B	H3BT56	60 aa		4.98	□□□□□ -1.61
ATG7-223	ENST00000478638	SEC61B	P60468	96 aa	Known RBP	4.98	□□□□□ -1.61
ATG7-223	ENST00000478638	COX6B2	Q6YFQ2	88 aa		4.98	□□□□□ -1.61
ATG7-223	ENST00000478638	PRR15L	Q9BU68	103 aa		4.98	□□□□□ -1.61
ATG7-223	ENST00000478638	ATP11AUN	Q6ZP68	121 aa		4.97	□□□□□ -1.61
ATG7-223	ENST00000478638	RNF213	Q63HN8	5207 aa		4.96	□□□□□ -1.61
ATG7-223	ENST00000478638	BRK1	Q8WUW1	75 aa		4.92	□□□□□ -1.62
ATG7-223	ENST00000478638	MUC17	Q685J3	4493 aa		4.91	□□□□□ -1.62
ATG7-223	ENST00000478638	SPTSSB	Q8NFR3	76 aa		4.9	□□□□□ -1.63
ATG7-223	ENST00000478638	LCA10	Q71F78	164 aa		4.88	□□□□□ -1.63
ATG7-223	ENST00000478638	CDC42SE1	Q9NRR8	79 aa		4.88	□□□□□ -1.63
ATG7-223	ENST00000478638		A0A1B0GU69	56 aa		4.87	□□□□□ -1.63
ATG7-223	ENST00000478638		A6NED7	52 aa		4.86	□□□□□ -1.63
ATG7-223	ENST00000478638	MUC2	Q02817	5179 aa		4.86	□□□□□ -1.63
ATG7-223	ENST00000478638		A8MU10	97 aa		4.83	□□□□□ -1.64
ATG7-223	ENST00000478638	KRTAP4-1	Q9BYQ7	146 aa		4.83	□□□□□ -1.64
ATG7-223	ENST00000478638	SPATA8	Q6RVD6	105 aa		4.82	□□□□□ -1.64
ATG7-223	ENST00000478638	UQCR11	O14957	56 aa		4.79	□□□□□ -1.64
ATG7-223	ENST00000478638	H1FX-AS1	Q4G0G2	97 aa		4.78	□□□□□ -1.64
ATG7-223	ENST00000478638	SEC61G	P60059	68 aa		4.76	□□□□□ -1.65
ATG7-223	ENST00000478638	FAT4	Q6V0I7	4981 aa		4.75	□□□□□ -1.65
ATG7-223	ENST00000478638		S4R3F8	94 aa		4.75	□□□□□ -1.65
ATG7-223	ENST00000478638	MIR22HG	Q0VDD5	57 aa		4.73	□□□□□ -1.65
ATG7-223	ENST00000478638		A6NN06	94 aa		4.72	□□□□□ -1.65
ATG7-223	ENST00000478638	KRTAP10-6	P60371	365 aa	Predicted RBP	4.72	□□□□□ -1.65
ATG7-223	ENST00000478638	RBM12B-AS1	Q9P1G2	102 aa		4.72	□□□□□ -1.65
ATG7-223	ENST00000478638	KRTAP19-2	Q3LHN2	52 aa		4.7	□□□□□ -1.66
ATG7-223	ENST00000478638		A0A1B0GU33	70 aa		4.69	□□□□□ -1.66
ATG7-223	ENST00000478638		H0YAA0	97 aa		4.69	□□□□□ -1.66
ATG7-223	ENST00000478638	PMAIP1	Q13794	54 aa		4.67	□□□□□ -1.66
ATG7-223	ENST00000478638	LCE2C	Q5TA81	110 aa		4.65	□□□□□ -1.67
ATG7-223	ENST00000478638	CSAG1	Q6PB30	78 aa		4.63	□□□□□ -1.67
ATG7-223	ENST00000478638	LCE2A	Q5TA79	106 aa	Predicted RBP	4.62	□□□□□ -1.67
ATG7-223	ENST00000478638		M0R2T5	61 aa		4.61	□□□□□ -1.67
ATG7-223	ENST00000478638	FLG	P20930	4061 aa	Predicted RBP	4.6	□□□□□ -1.67
ATG7-223	ENST00000478638	MT1H	P80294	61 aa		4.6	□□□□□ -1.67
ATG7-223	ENST00000478638		P0C880	135 aa		4.59	□□□□□ -1.67
ATG7-223	ENST00000478638	KTN1-AS1	Q86SY8	53 aa		4.59	□□□□□ -1.67
ATG7-223	ENST00000478638	KRTAP13-4	Q3LI77	160 aa		4.58	□□□□□ -1.68
ATG7-223	ENST00000478638	ADM2	Q7Z4H4	148 aa		4.55	□□□□□ -1.68
ATG7-223	ENST00000478638		M0QZ58	72 aa		4.52	□□□□□ -1.69
ATG7-223	ENST00000478638	LOR	P23490	312 aa	Predicted RBP	4.45	□□□□□ -1.7
ATG7-223	ENST00000478638		K7ERS5	55 aa		4.44	□□□□□ -1.7
ATG7-223	ENST00000478638	KRTAP12-1	P59990	96 aa		4.43	□□□□□ -1.7
ATG7-223	ENST00000478638	LCE2B	O14633	110 aa		4.42	□□□□□ -1.7
ATG7-223	ENST00000478638		A0A0D9SG42	100 aa		4.39	□□□□□ -1.71
ATG7-223	ENST00000478638	LOC100996750	A0A140TA64	210 aa		4.39	□□□□□ -1.71
ATG7-223	ENST00000478638	KRTAP12-2	P59991	146 aa		4.39	□□□□□ -1.71
ATG7-223	ENST00000478638	KRTAP4-6	Q9BYQ5	205 aa		4.39	□□□□□ -1.71
ATG7-223	ENST00000478638	KRTAP9-8	Q9BYQ0	159 aa		4.37	□□□□□ -1.71
ATG7-223	ENST00000478638	PRAC1	Q96KF2	57 aa		4.36	□□□□□ -1.71
ATG7-223	ENST00000478638	CRIPT	Q9P021	101 aa		4.36	□□□□□ -1.71
ATG7-223	ENST00000478638	KRTAP10-10	P60014	251 aa		4.35	□□□□□ -1.71
ATG7-223	ENST00000478638	ROMO1	P60602	79 aa		4.35	□□□□□ -1.71
ATG7-223	ENST00000478638	KRTAP9-2	Q9BYQ4	174 aa		4.35	□□□□□ -1.71
ATG7-223	ENST00000478638		R4GN34	69 aa		4.35	□□□□□ -1.71
ATG7-223	ENST00000478638	MT2A	P02795	61 aa		4.34	□□□□□ -1.71
ATG7-223	ENST00000478638	MT1F	P04733	61 aa		4.3	□□□□□ -1.72
ATG7-223	ENST00000478638	KRTAP25-1	Q3LHN0	102 aa		4.28	□□□□□ -1.72
ATG7-223	ENST00000478638	SPINT4	Q6UDR6	99 aa		4.28	□□□□□ -1.72
ATG7-223	ENST00000478638	SPRR2G	Q9BYE4	73 aa		4.24	□□□□□ -1.73
ATG7-223	ENST00000478638	KRTAP9-3	Q9BYQ3	159 aa		4.24	□□□□□ -1.73
ATG7-223	ENST00000478638	LINC01554	Q52M75	96 aa		4.21	□□□□□ -1.74
ATG7-223	ENST00000478638	KRTAP19-1	Q8IUB9	90 aa		4.21	□□□□□ -1.74
ATG7-223	ENST00000478638	C10orf95	Q9H7T3	257 aa		4.17	□□□□□ -1.74
ATG7-223	ENST00000478638	USH2A	O75445	5202 aa		4.16	□□□□□ -1.74
ATG7-223	ENST00000478638	CRCT1	Q9UGL9	99 aa		4.16	□□□□□ -1.74
ATG7-223	ENST00000478638	KRTAP9-6	A0A140TA67	174 aa		4.14	□□□□□ -1.75
ATG7-223	ENST00000478638	KRTAP19-8	Q3LI54	63 aa		4.14	□□□□□ -1.75
ATG7-223	ENST00000478638	FSIP2	Q5CZC0	6907 aa		4.14	□□□□□ -1.75
ATG7-223	ENST00000478638	CAMK2N1	Q7Z7J9	78 aa		4.07	□□□□□ -1.76
ATG7-223	ENST00000478638	SSPO	A2VEC9	5147 aa		4.07	□□□□□ -1.76
ATG7-223	ENST00000478638	KRTAP23-1	A1A580	65 aa		4.03	□□□□□ -1.76
ATG7-223	ENST00000478638	MT1B	P07438	61 aa		4.03	□□□□□ -1.76
ATG7-223	ENST00000478638	PLAC4	Q8WY50	150 aa		4.02	□□□□□ -1.77
ATG7-223	ENST00000478638	PP632	Q6XCG6	107 aa		4	□□□□□ -1.77
ATG7-223	ENST00000478638	KRTAP19-6	Q3LI70	58 aa		3.99	□□□□□ -1.77
ATG7-223	ENST00000478638	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.97	□□□□□ -1.77
ATG7-223	ENST00000478638	TNP1	P09430	55 aa		3.97	□□□□□ -1.77
ATG7-223	ENST00000478638	MT1X	P80297	61 aa		3.93	□□□□□ -1.78
ATG7-223	ENST00000478638	KRTAP4-8	Q9BYQ9	185 aa		3.93	□□□□□ -1.78
ATG7-223	ENST00000478638	KRTAP10-5	P60370	271 aa		3.92	□□□□□ -1.78
ATG7-223	ENST00000478638	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.86	□□□□□ -1.79
ATG7-223	ENST00000478638	KRTAP15-1	Q3LI76	137 aa		3.86	□□□□□ -1.79
ATG7-223	ENST00000478638	PRO2289	Q9P1D8	64 aa		3.86	□□□□□ -1.79
ATG7-223	ENST00000478638	KRTAP8-1	Q8IUC2	63 aa		3.8	□□□□□ -1.8
ATG7-223	ENST00000478638	LCE3A	Q5TA76	89 aa		3.78	□□□□□ -1.8
ATG7-223	ENST00000478638	KRTAP9-7	A8MTY7	169 aa		3.75	□□□□□ -1.81
ATG7-223	ENST00000478638	MACF1	Q9UPN3	7388 aa	Known RBP	3.74	□□□□□ -1.81
ATG7-223	ENST00000478638	KRTAP10-12	P60413	245 aa		3.74	□□□□□ -1.81
ATG7-223	ENST00000478638	KRTAP10-7	P60409	375 aa	Predicted RBP	3.73	□□□□□ -1.81
ATG7-223	ENST00000478638	SPRR5	A0A1B0GTR4	108 aa		3.71	□□□□□ -1.82
ATG7-223	ENST00000478638	LCE3B	Q5TA77	95 aa		3.71	□□□□□ -1.82
ATG7-223	ENST00000478638	SYNE2	Q8WXH0	6885 aa	Known RBP	3.68	□□□□□ -1.82
ATG7-223	ENST00000478638	KRTAP6-3	Q3LI67	103 aa		3.68	□□□□□ -1.82
ATG7-223	ENST00000478638	KRTAP4-8	A0A0G2JLE6	195 aa		3.67	□□□□□ -1.82
ATG7-223	ENST00000478638	KRTAP4-12	Q9BQ66	201 aa		3.65	□□□□□ -1.83
ATG7-223	ENST00000478638	KRTAP9-9	Q9BYP9	154 aa		3.65	□□□□□ -1.83
ATG7-223	ENST00000478638	KRTAP9-4	Q9BYQ2	154 aa		3.65	□□□□□ -1.83
ATG7-223	ENST00000478638	KRTAP12-3	P60328	96 aa		3.63	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms