RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 ATOX1O00244 68 aa6.35□□□□□ -1.39
RCC1-211ENST00000478232 HIST1H4AP62805 103 aaKnown RBP6.35□□□□□ -1.39
RCC1-211ENST00000478232 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
RCC1-211ENST00000478232 C5orf47Q569G3 176 aa6.34□□□□□ -1.39
RCC1-211ENST00000478232 TP53AIP1Q9HCN2 124 aa6.34□□□□□ -1.39
RCC1-211ENST00000478232 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
RCC1-211ENST00000478232 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
RCC1-211ENST00000478232 C1orf64Q8NEQ6 169 aa6.33□□□□□ -1.4
RCC1-211ENST00000478232 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
RCC1-211ENST00000478232 CSAG1Q6PB30 78 aa6.32□□□□□ -1.4
RCC1-211ENST00000478232 UQCRQO14949 82 aa6.31□□□□□ -1.4
RCC1-211ENST00000478232 S4R3F8 94 aa6.31□□□□□ -1.4
RCC1-211ENST00000478232 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
RCC1-211ENST00000478232 COX7CP15954 63 aa6.28□□□□□ -1.4
RCC1-211ENST00000478232 LCA10Q71F78 164 aa6.26□□□□□ -1.41
RCC1-211ENST00000478232 SERP2Q8N6R1 65 aa6.26□□□□□ -1.41
RCC1-211ENST00000478232 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
RCC1-211ENST00000478232 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
RCC1-211ENST00000478232 CYP4F30PQ9H0H9 118 aa6.22□□□□□ -1.41
RCC1-211ENST00000478232 SPRR2GQ9BYE4 73 aa6.21□□□□□ -1.42
RCC1-211ENST00000478232 Q5VV11 94 aa6.2□□□□□ -1.42
RCC1-211ENST00000478232 A0A087WVE0 104 aa6.19□□□□□ -1.42
RCC1-211ENST00000478232 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
RCC1-211ENST00000478232 MT1BP07438 61 aa6.18□□□□□ -1.42
RCC1-211ENST00000478232 A6NN06 94 aa6.17□□□□□ -1.42
RCC1-211ENST00000478232 KLKP1Q107X0 134 aa6.17□□□□□ -1.42
RCC1-211ENST00000478232 TRAV7A0A075B6U4 112 aa6.16□□□□□ -1.42
RCC1-211ENST00000478232 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
RCC1-211ENST00000478232 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.42
RCC1-211ENST00000478232 LOC101927531A0A1B0GV80 90 aa6.15□□□□□ -1.42
RCC1-211ENST00000478232 TMEM258P61165 79 aa6.14□□□□□ -1.43
RCC1-211ENST00000478232 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
RCC1-211ENST00000478232 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
RCC1-211ENST00000478232 NDUFC1O43677 76 aa6.08□□□□□ -1.44
RCC1-211ENST00000478232 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
RCC1-211ENST00000478232 KRTAP4-2Q9BYR5 136 aa6.07□□□□□ -1.44
RCC1-211ENST00000478232 H0Y9P7 68 aa6.05□□□□□ -1.44
RCC1-211ENST00000478232 C20orf197Q8N268 126 aa6.04□□□□□ -1.44
RCC1-211ENST00000478232 H0YAA0 97 aa6.02□□□□□ -1.45
RCC1-211ENST00000478232 ATP5EP56381 51 aaPredicted RBP6.02□□□□□ -1.45
RCC1-211ENST00000478232 OCR1Q9BZK8 76 aa6.01□□□□□ -1.45
RCC1-211ENST00000478232 A8MUN3 132 aa6□□□□□ -1.45
RCC1-211ENST00000478232 CYSTM1Q9H1C7 97 aa6□□□□□ -1.45
RCC1-211ENST00000478232 H7BZZ5 65 aa5.98□□□□□ -1.45
RCC1-211ENST00000478232 NEBP20929 6669 aa5.97□□□□□ -1.45
RCC1-211ENST00000478232 LINC00208Q96KT6 92 aa5.96□□□□□ -1.46
RCC1-211ENST00000478232 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
RCC1-211ENST00000478232 SERP1Q9Y6X1 66 aa5.95□□□□□ -1.46
RCC1-211ENST00000478232 MP68P56378 58 aa5.93□□□□□ -1.46
RCC1-211ENST00000478232 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
RCC1-211ENST00000478232 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
RCC1-211ENST00000478232 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
RCC1-211ENST00000478232 KRTAP4-11Q9BYQ6 195 aa5.91□□□□□ -1.46
RCC1-211ENST00000478232 H3BPC8 53 aa5.89□□□□□ -1.47
RCC1-211ENST00000478232 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
RCC1-211ENST00000478232 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
RCC1-211ENST00000478232 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
RCC1-211ENST00000478232 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
RCC1-211ENST00000478232 KRTAP20-1Q3LI63 56 aa5.8□□□□□ -1.48
RCC1-211ENST00000478232 R4GN34 69 aa5.8□□□□□ -1.48
RCC1-211ENST00000478232 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
RCC1-211ENST00000478232 SPANXA2-OT1Q8N9U9 137 aa5.78□□□□□ -1.48
RCC1-211ENST00000478232 P0C880 135 aa5.77□□□□□ -1.49
RCC1-211ENST00000478232 MT1XP80297 61 aa5.77□□□□□ -1.49
RCC1-211ENST00000478232 DMAC1Q96GE9 116 aa5.77□□□□□ -1.49
RCC1-211ENST00000478232 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
RCC1-211ENST00000478232 KMT2DO14686 5537 aa5.74□□□□□ -1.49
RCC1-211ENST00000478232 M0QZ58 72 aa5.73□□□□□ -1.49
RCC1-211ENST00000478232 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
RCC1-211ENST00000478232 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
RCC1-211ENST00000478232 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
RCC1-211ENST00000478232 V9GYY9 64 aa5.68□□□□□ -1.5
RCC1-211ENST00000478232 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
RCC1-211ENST00000478232 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
RCC1-211ENST00000478232 Q1T7F1 81 aa5.66□□□□□ -1.5
RCC1-211ENST00000478232 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
RCC1-211ENST00000478232 ACYP2P14621 99 aa5.65□□□□□ -1.5
RCC1-211ENST00000478232 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
RCC1-211ENST00000478232 SPRR2EP22531 72 aa5.63□□□□□ -1.51
RCC1-211ENST00000478232 SPRR2BP35325 72 aa5.63□□□□□ -1.51
RCC1-211ENST00000478232 SPRR2AP35326 72 aa5.63□□□□□ -1.51
RCC1-211ENST00000478232 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
RCC1-211ENST00000478232 SPTSSBQ8NFR3 76 aa5.61□□□□□ -1.51
RCC1-211ENST00000478232 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
RCC1-211ENST00000478232 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
RCC1-211ENST00000478232 COA5Q86WW8 74 aa5.54□□□□□ -1.52
RCC1-211ENST00000478232 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
RCC1-211ENST00000478232 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
RCC1-211ENST00000478232 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
RCC1-211ENST00000478232 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
RCC1-211ENST00000478232 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
RCC1-211ENST00000478232 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
RCC1-211ENST00000478232 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
RCC1-211ENST00000478232 LINC01558Q9Y6Z2 57 aa5.46□□□□□ -1.54
RCC1-211ENST00000478232 SPRR2DP22532 72 aa5.45□□□□□ -1.54
RCC1-211ENST00000478232 PSPHP1O15172 72 aa5.44□□□□□ -1.54
RCC1-211ENST00000478232 PRR15LQ9BU68 103 aa5.41□□□□□ -1.54
RCC1-211ENST00000478232 A6NED7 52 aa5.33□□□□□ -1.56
RCC1-211ENST00000478232 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
RCC1-211ENST00000478232 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms