RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 A0A087X002 238 aa2.87□□□□□ -1.95
SF3B6-202ENST00000478050 LOC101927531A0A1B0GV80 90 aa2.87□□□□□ -1.95
SF3B6-202ENST00000478050 SEC61GP60059 68 aa2.87□□□□□ -1.95
SF3B6-202ENST00000478050 SPINK6Q6UWN8 80 aa2.87□□□□□ -1.95
SF3B6-202ENST00000478050 Q6ZSA8 131 aa2.87□□□□□ -1.95
SF3B6-202ENST00000478050 NOTCH2NLQ7Z3S9 236 aa2.87□□□□□ -1.95
SF3B6-202ENST00000478050 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
SF3B6-202ENST00000478050 LIMD2Q9BT23 127 aa2.87□□□□□ -1.95
SF3B6-202ENST00000478050 PCOTHQ58A44 107 aa2.86□□□□□ -1.95
SF3B6-202ENST00000478050 COA5Q86WW8 74 aa2.86□□□□□ -1.95
SF3B6-202ENST00000478050 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
SF3B6-202ENST00000478050 Q5VSD8 79 aa2.85□□□□□ -1.95
SF3B6-202ENST00000478050 PKD1P98161 4303 aa2.85□□□□□ -1.95
SF3B6-202ENST00000478050 FAT2Q9NYQ8 4349 aa2.85□□□□□ -1.95
SF3B6-202ENST00000478050 APOBP04114 4563 aaKnown RBP2.84□□□□□ -1.95
SF3B6-202ENST00000478050 PSPHP1O15172 72 aa2.84□□□□□ -1.95
SF3B6-202ENST00000478050 LINC00313P59037 77 aa2.84□□□□□ -1.95
SF3B6-202ENST00000478050 KRTAP10-1P60331 282 aa2.84□□□□□ -1.95
SF3B6-202ENST00000478050 KRTAP13-3Q3SY46 172 aa2.84□□□□□ -1.95
SF3B6-202ENST00000478050 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.95
SF3B6-202ENST00000478050 A8MUN3 132 aa2.83□□□□□ -1.96
SF3B6-202ENST00000478050 KRTAP13-2Q52LG2 175 aa2.83□□□□□ -1.96
SF3B6-202ENST00000478050 Q5VV11 94 aa2.83□□□□□ -1.96
SF3B6-202ENST00000478050 LRP1BQ9NZR2 4599 aa2.82□□□□□ -1.96
SF3B6-202ENST00000478050 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
SF3B6-202ENST00000478050 Q5W150 140 aa2.82□□□□□ -1.96
SF3B6-202ENST00000478050 PRR15LQ9BU68 103 aa2.82□□□□□ -1.96
SF3B6-202ENST00000478050 KRTAP1-4P0C5Y4 121 aa2.81□□□□□ -1.96
SF3B6-202ENST00000478050 HRES1P13985 223 aa2.81□□□□□ -1.96
SF3B6-202ENST00000478050 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
SF3B6-202ENST00000478050 CHKB-CPT1BH3BT56 60 aa2.8□□□□□ -1.96
SF3B6-202ENST00000478050 ACYP2P14621 99 aa2.8□□□□□ -1.96
SF3B6-202ENST00000478050 KRTAP16-1A8MUX0 517 aa2.79□□□□□ -1.96
SF3B6-202ENST00000478050 SPINK1P00995 79 aa2.79□□□□□ -1.96
SF3B6-202ENST00000478050 RPS29P62273 56 aaKnown RBP2.79□□□□□ -1.96
SF3B6-202ENST00000478050 TYMSOSQ8TAI1 123 aa2.79□□□□□ -1.96
SF3B6-202ENST00000478050 FAT1Q14517 4588 aa2.79□□□□□ -1.96
SF3B6-202ENST00000478050 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
SF3B6-202ENST00000478050 KRTAP10-12P60413 245 aa2.78□□□□□ -1.96
SF3B6-202ENST00000478050 SPAG11AQ6PDA7 123 aa2.78□□□□□ -1.96
SF3B6-202ENST00000478050 DMAC1Q96GE9 116 aa2.78□□□□□ -1.96
SF3B6-202ENST00000478050 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
SF3B6-202ENST00000478050 A6NED7 52 aa2.77□□□□□ -1.97
SF3B6-202ENST00000478050 LRP2P98164 4655 aa2.77□□□□□ -1.97
SF3B6-202ENST00000478050 LINC00304Q8N9R0 145 aa2.76□□□□□ -1.97
SF3B6-202ENST00000478050 RETNLBQ9BQ08 111 aa2.76□□□□□ -1.97
SF3B6-202ENST00000478050 PKHD1L1Q86WI1 4243 aa2.75□□□□□ -1.97
SF3B6-202ENST00000478050 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
SF3B6-202ENST00000478050 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
SF3B6-202ENST00000478050 ATP11AUNQ6ZP68 121 aa2.74□□□□□ -1.97
SF3B6-202ENST00000478050 C7orf65Q6ZTY9 151 aa2.73□□□□□ -1.97
SF3B6-202ENST00000478050 LCA10Q71F78 164 aa2.73□□□□□ -1.97
SF3B6-202ENST00000478050 SMR3BP02814 79 aaPredicted RBP2.72□□□□□ -1.97
SF3B6-202ENST00000478050 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
SF3B6-202ENST00000478050 A8MU10 97 aa2.71□□□□□ -1.98
SF3B6-202ENST00000478050 SPINK7P58062 85 aa2.71□□□□□ -1.98
SF3B6-202ENST00000478050 A0A1B0GU69 56 aa2.7□□□□□ -1.98
SF3B6-202ENST00000478050 A8MUU9 505 aa2.7□□□□□ -1.98
SF3B6-202ENST00000478050 SPTSSBQ8NFR3 76 aa2.7□□□□□ -1.98
SF3B6-202ENST00000478050 KRTAP10-4P60372 401 aaPredicted RBP2.69□□□□□ -1.98
SF3B6-202ENST00000478050 C20orf166-AS1Q96NR2 134 aa2.69□□□□□ -1.98
SF3B6-202ENST00000478050 A6NN06 94 aa2.68□□□□□ -1.98
SF3B6-202ENST00000478050 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
SF3B6-202ENST00000478050 C9orf92A6NGG3 77 aa2.66□□□□□ -1.98
SF3B6-202ENST00000478050 UQCR11O14957 56 aa2.66□□□□□ -1.98
SF3B6-202ENST00000478050 SPATA8Q6RVD6 105 aa2.66□□□□□ -1.98
SF3B6-202ENST00000478050 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
SF3B6-202ENST00000478050 LRP1Q07954 4544 aaKnown RBP2.64□□□□□ -1.99
SF3B6-202ENST00000478050 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
SF3B6-202ENST00000478050 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
SF3B6-202ENST00000478050 TNXBP22105 4242 aa2.63□□□□□ -1.99
SF3B6-202ENST00000478050 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
SF3B6-202ENST00000478050 KRTAP10-8P60410 259 aa2.61□□□□□ -1.99
SF3B6-202ENST00000478050 COX6B2Q6YFQ2 88 aa2.61□□□□□ -1.99
SF3B6-202ENST00000478050 RPL37P61927 97 aaKnown RBP2.58□□□□□ -2
SF3B6-202ENST00000478050 RBM12B-AS1Q9P1G2 102 aa2.58□□□□□ -2
SF3B6-202ENST00000478050 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
SF3B6-202ENST00000478050 A0A1B0GU33 70 aa2.56□□□□□ -2
SF3B6-202ENST00000478050 H1FX-AS1Q4G0G2 97 aa2.56□□□□□ -2
SF3B6-202ENST00000478050 MT1HL1P0DM35 61 aa2.55□□□□□ -2
SF3B6-202ENST00000478050 H0YAA0 97 aa2.54□□□□□ -2
SF3B6-202ENST00000478050 LCE3AQ5TA76 89 aa2.54□□□□□ -2
SF3B6-202ENST00000478050 K7ERS5 55 aa2.51□□□□□ -2.01
SF3B6-202ENST00000478050 ADM2Q7Z4H4 148 aa2.51□□□□□ -2.01
SF3B6-202ENST00000478050 S4R3F8 94 aa2.51□□□□□ -2.01
SF3B6-202ENST00000478050 TPRXLQ17RH7 258 aa2.48□□□□□ -2.01
SF3B6-202ENST00000478050 CSAG1Q6PB30 78 aa2.47□□□□□ -2.01
SF3B6-202ENST00000478050 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
SF3B6-202ENST00000478050 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
SF3B6-202ENST00000478050 LPAP08519 4548 aa2.45□□□□□ -2.02
SF3B6-202ENST00000478050 CAMK2N1Q7Z7J9 78 aa2.45□□□□□ -2.02
SF3B6-202ENST00000478050 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
SF3B6-202ENST00000478050 ROMO1P60602 79 aa2.43□□□□□ -2.02
SF3B6-202ENST00000478050 KRTAP25-1Q3LHN0 102 aa2.43□□□□□ -2.02
SF3B6-202ENST00000478050 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
SF3B6-202ENST00000478050 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
SF3B6-202ENST00000478050 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
SF3B6-202ENST00000478050 A0A0D9SG42 100 aa2.41□□□□□ -2.02
SF3B6-202ENST00000478050 P0C880 135 aa2.41□□□□□ -2.02
SF3B6-202ENST00000478050 NEBP20929 6669 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms