RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 V9GYY9 64 aa1.86□□□□□ -2.11
UBR3-209ENST00000477461 hDV103S1A0JD37 113 aa1.85□□□□□ -2.11
UBR3-209ENST00000477461 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
UBR3-209ENST00000477461 NDUFS5O43920 106 aa1.85□□□□□ -2.11
UBR3-209ENST00000477461 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
UBR3-209ENST00000477461 CASC2Q6XLA1 102 aa1.85□□□□□ -2.11
UBR3-209ENST00000477461 TMEM254Q8TBM7 123 aa1.85□□□□□ -2.11
UBR3-209ENST00000477461 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.11
UBR3-209ENST00000477461 PSPHP1O15172 72 aa1.84□□□□□ -2.11
UBR3-209ENST00000477461 MRPL34Q9BQ48 92 aaKnown RBP1.84□□□□□ -2.11
UBR3-209ENST00000477461 IMUPQ9GZP8 106 aa1.84□□□□□ -2.11
UBR3-209ENST00000477461 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
UBR3-209ENST00000477461 A0A087WVE0 104 aa1.83□□□□□ -2.12
UBR3-209ENST00000477461 MT-ATP8P03928 68 aa1.83□□□□□ -2.12
UBR3-209ENST00000477461 SCGB1A1P11684 91 aa1.83□□□□□ -2.12
UBR3-209ENST00000477461 ATP11AUNQ6ZP68 121 aa1.83□□□□□ -2.12
UBR3-209ENST00000477461 CRCT1Q9UGL9 99 aa1.83□□□□□ -2.12
UBR3-209ENST00000477461 PKHD1L1Q86WI1 4243 aa1.83□□□□□ -2.12
UBR3-209ENST00000477461 FAT1Q14517 4588 aa1.83□□□□□ -2.12
UBR3-209ENST00000477461 HERC2O95714 4834 aa1.82□□□□□ -2.12
UBR3-209ENST00000477461 RPL37P61927 97 aaKnown RBP1.82□□□□□ -2.12
UBR3-209ENST00000477461 C20orf166-AS1Q96NR2 134 aa1.82□□□□□ -2.12
UBR3-209ENST00000477461 FAM236AA0A1B0GUQ0 79 aa1.81□□□□□ -2.12
UBR3-209ENST00000477461 FAM236BA0A1B0GV22 79 aa1.81□□□□□ -2.12
UBR3-209ENST00000477461 PCOTHQ58A44 107 aa1.81□□□□□ -2.12
UBR3-209ENST00000477461 ZCCHC13Q8WW36 166 aaKnown RBP1.81□□□□□ -2.12
UBR3-209ENST00000477461 TP53AIP1Q9HCN2 124 aa1.81□□□□□ -2.12
UBR3-209ENST00000477461 UQCRQO14949 82 aa1.8□□□□□ -2.12
UBR3-209ENST00000477461 SMIM20Q8N5G0 67 aa1.8□□□□□ -2.12
UBR3-209ENST00000477461 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
UBR3-209ENST00000477461 ATOX1O00244 68 aa1.79□□□□□ -2.12
UBR3-209ENST00000477461 MP68P56378 58 aa1.79□□□□□ -2.12
UBR3-209ENST00000477461 TRAV22A0A0B4J277 110 aa1.78□□□□□ -2.12
UBR3-209ENST00000477461 H0Y9P7 68 aa1.78□□□□□ -2.12
UBR3-209ENST00000477461 C1orf64Q8NEQ6 169 aa1.78□□□□□ -2.12
UBR3-209ENST00000477461 MYCBP2O75592 4640 aa1.78□□□□□ -2.13
UBR3-209ENST00000477461 TRAV7A0A075B6U4 112 aa1.77□□□□□ -2.13
UBR3-209ENST00000477461 P0C880 135 aa1.77□□□□□ -2.13
UBR3-209ENST00000477461 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
UBR3-209ENST00000477461 C7orf65Q6ZTY9 151 aa1.77□□□□□ -2.13
UBR3-209ENST00000477461 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
UBR3-209ENST00000477461 FAT3Q8TDW7 4589 aa1.77□□□□□ -2.13
UBR3-209ENST00000477461 ABCA13Q86UQ4 5058 aa1.77□□□□□ -2.13
UBR3-209ENST00000477461 FAM236DA0A1B0GTK5 79 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 LOC101927531A0A1B0GV80 90 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 H3BPC8 53 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 FAM236CP0DP71 79 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 SPINK7P58062 85 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 SERP2Q8N6R1 65 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 LINC00208Q96KT6 92 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 PRO0628Q9UI54 55 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 TNXBP22105 4242 aa1.76□□□□□ -2.13
UBR3-209ENST00000477461 COX6B2Q6YFQ2 88 aa1.75□□□□□ -2.13
UBR3-209ENST00000477461 ANAPC13Q9BS18 74 aa1.75□□□□□ -2.13
UBR3-209ENST00000477461 RBM12B-AS1Q9P1G2 102 aa1.75□□□□□ -2.13
UBR3-209ENST00000477461 COX7CP15954 63 aa1.74□□□□□ -2.13
UBR3-209ENST00000477461 CYP4F30PQ9H0H9 118 aa1.74□□□□□ -2.13
UBR3-209ENST00000477461 HRES1P13985 223 aa1.73□□□□□ -2.13
UBR3-209ENST00000477461 C20orf197Q8N268 126 aa1.73□□□□□ -2.13
UBR3-209ENST00000477461 SNURFQ9Y675 71 aa1.73□□□□□ -2.13
UBR3-209ENST00000477461 C4orf26Q17RF5 130 aa1.72□□□□□ -2.13
UBR3-209ENST00000477461 PCLOQ9Y6V0 5065 aa1.72□□□□□ -2.13
UBR3-209ENST00000477461 KLKP1Q107X0 134 aa1.71□□□□□ -2.14
UBR3-209ENST00000477461 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
UBR3-209ENST00000477461 NDUFC1O43677 76 aa1.7□□□□□ -2.14
UBR3-209ENST00000477461 A8MUN3 132 aa1.69□□□□□ -2.14
UBR3-209ENST00000477461 CCDC179H3BU77 68 aa1.69□□□□□ -2.14
UBR3-209ENST00000477461 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
UBR3-209ENST00000477461 M0R2T5 61 aa1.68□□□□□ -2.14
UBR3-209ENST00000477461 ACYP2P14621 99 aa1.68□□□□□ -2.14
UBR3-209ENST00000477461 ADM2Q7Z4H4 148 aa1.68□□□□□ -2.14
UBR3-209ENST00000477461 S4R3F8 94 aa1.68□□□□□ -2.14
UBR3-209ENST00000477461 CHKB-CPT1BH3BT56 60 aa1.67□□□□□ -2.14
UBR3-209ENST00000477461 DMAC1Q96GE9 116 aa1.67□□□□□ -2.14
UBR3-209ENST00000477461 H7BZZ5 65 aa1.66□□□□□ -2.14
UBR3-209ENST00000477461 ATP5EP56381 51 aaPredicted RBP1.66□□□□□ -2.14
UBR3-209ENST00000477461 KRTAP19-2Q3LHN2 52 aa1.66□□□□□ -2.14
UBR3-209ENST00000477461 SPTSSBQ8NFR3 76 aa1.66□□□□□ -2.14
UBR3-209ENST00000477461 LPAP08519 4548 aa1.66□□□□□ -2.14
UBR3-209ENST00000477461 LRP2P98164 4655 aa1.65□□□□□ -2.14
UBR3-209ENST00000477461 TMEM258P61165 79 aa1.65□□□□□ -2.15
UBR3-209ENST00000477461 MT1HP80294 61 aa1.65□□□□□ -2.15
UBR3-209ENST00000477461 CSAG1Q6PB30 78 aa1.65□□□□□ -2.15
UBR3-209ENST00000477461 CYSTM1Q9H1C7 97 aa1.65□□□□□ -2.15
UBR3-209ENST00000477461 FCGBPQ9Y6R7 5405 aaPredicted RBP1.65□□□□□ -2.15
UBR3-209ENST00000477461 HERC1Q15751 4861 aa1.65□□□□□ -2.15
UBR3-209ENST00000477461 LCA10Q71F78 164 aa1.64□□□□□ -2.15
UBR3-209ENST00000477461 R4GN34 69 aa1.64□□□□□ -2.15
UBR3-209ENST00000477461 COA5Q86WW8 74 aa1.63□□□□□ -2.15
UBR3-209ENST00000477461 HMCN2Q8NDA2 5059 aa1.62□□□□□ -2.15
UBR3-209ENST00000477461 MUC17Q685J3 4493 aa1.61□□□□□ -2.15
UBR3-209ENST00000477461 K7ERS5 55 aa1.6□□□□□ -2.15
UBR3-209ENST00000477461 SERP1Q9Y6X1 66 aa1.6□□□□□ -2.15
UBR3-209ENST00000477461 KRTAP25-1Q3LHN0 102 aa1.59□□□□□ -2.15
UBR3-209ENST00000477461 H0YAA0 97 aa1.58□□□□□ -2.16
UBR3-209ENST00000477461 A6NED7 52 aa1.57□□□□□ -2.16
UBR3-209ENST00000477461 MT2AP02795 61 aa1.57□□□□□ -2.16
UBR3-209ENST00000477461 PRR15LQ9BU68 103 aa1.57□□□□□ -2.16
UBR3-209ENST00000477461 UBR4Q5T4S7 5183 aa1.56□□□□□ -2.16
UBR3-209ENST00000477461 A0A1B0GU69 56 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms