RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 MUC2Q02817 5179 aa3.36□□□□□ -1.87
CCDC30-209ENST00000477155 Q5VV11 94 aa3.36□□□□□ -1.87
CCDC30-209ENST00000477155 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
CCDC30-209ENST00000477155 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
CCDC30-209ENST00000477155 A0A1B0GU69 56 aa3.34□□□□□ -1.88
CCDC30-209ENST00000477155 LCA10Q71F78 164 aa3.33□□□□□ -1.88
CCDC30-209ENST00000477155 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
CCDC30-209ENST00000477155 SPTSSBQ8NFR3 76 aa3.33□□□□□ -1.88
CCDC30-209ENST00000477155 HMCN2Q8NDA2 5059 aa3.33□□□□□ -1.88
CCDC30-209ENST00000477155 H1FX-AS1Q4G0G2 97 aa3.32□□□□□ -1.88
CCDC30-209ENST00000477155 S4R3F8 94 aa3.32□□□□□ -1.88
CCDC30-209ENST00000477155 A6NED7 52 aa3.31□□□□□ -1.88
CCDC30-209ENST00000477155 MUC17Q685J3 4493 aa3.31□□□□□ -1.88
CCDC30-209ENST00000477155 A8MU10 97 aa3.3□□□□□ -1.88
CCDC30-209ENST00000477155 SEC61GP60059 68 aa3.3□□□□□ -1.88
CCDC30-209ENST00000477155 CSAG1Q6PB30 78 aa3.24□□□□□ -1.89
CCDC30-209ENST00000477155 RNF213Q63HN8 5207 aa3.24□□□□□ -1.89
CCDC30-209ENST00000477155 UBR4Q5T4S7 5183 aa3.24□□□□□ -1.89
CCDC30-209ENST00000477155 UQCR11O14957 56 aa3.23□□□□□ -1.89
CCDC30-209ENST00000477155 PRO0628Q9UI54 55 aa3.23□□□□□ -1.89
CCDC30-209ENST00000477155 A0A1B0GU33 70 aa3.22□□□□□ -1.89
CCDC30-209ENST00000477155 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
CCDC30-209ENST00000477155 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
CCDC30-209ENST00000477155 CDC42SE1Q9NRR8 79 aa3.21□□□□□ -1.9
CCDC30-209ENST00000477155 P0C880 135 aa3.21□□□□□ -1.9
CCDC30-209ENST00000477155 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
CCDC30-209ENST00000477155 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
CCDC30-209ENST00000477155 ADM2Q7Z4H4 148 aa3.21□□□□□ -1.9
CCDC30-209ENST00000477155 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
CCDC30-209ENST00000477155 LOC100996750A0A140TA64 210 aa3.19□□□□□ -1.9
CCDC30-209ENST00000477155 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
CCDC30-209ENST00000477155 H0YAA0 97 aa3.18□□□□□ -1.9
CCDC30-209ENST00000477155 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
CCDC30-209ENST00000477155 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
CCDC30-209ENST00000477155 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
CCDC30-209ENST00000477155 A0A0D9SG42 100 aa3.14□□□□□ -1.91
CCDC30-209ENST00000477155 LCE2CQ5TA81 110 aa3.14□□□□□ -1.91
CCDC30-209ENST00000477155 M0R2T5 61 aa3.12□□□□□ -1.91
CCDC30-209ENST00000477155 LCE2BO14633 110 aa3.12□□□□□ -1.91
CCDC30-209ENST00000477155 LORP23490 312 aaPredicted RBP3.11□□□□□ -1.91
CCDC30-209ENST00000477155 LINC01554Q52M75 96 aa3.09□□□□□ -1.91
CCDC30-209ENST00000477155 M0QZ58 72 aa3.09□□□□□ -1.92
CCDC30-209ENST00000477155 R4GN34 69 aa3.09□□□□□ -1.92
CCDC30-209ENST00000477155 MT1HP80294 61 aa3.08□□□□□ -1.92
CCDC30-209ENST00000477155 A6NN06 94 aa3.07□□□□□ -1.92
CCDC30-209ENST00000477155 SPINT4Q6UDR6 99 aa3.05□□□□□ -1.92
CCDC30-209ENST00000477155 K7ERS5 55 aa3.04□□□□□ -1.92
CCDC30-209ENST00000477155 LCE2AQ5TA79 106 aaPredicted RBP3.04□□□□□ -1.92
CCDC30-209ENST00000477155 SVIPQ8NHG7 77 aa3.04□□□□□ -1.92
CCDC30-209ENST00000477155 KRTAP12-2P59991 146 aa3.03□□□□□ -1.93
CCDC30-209ENST00000477155 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
CCDC30-209ENST00000477155 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
CCDC30-209ENST00000477155 KTN1-AS1Q86SY8 53 aa2.98□□□□□ -1.93
CCDC30-209ENST00000477155 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
CCDC30-209ENST00000477155 MT2AP02795 61 aa2.97□□□□□ -1.93
CCDC30-209ENST00000477155 MT1FP04733 61 aa2.97□□□□□ -1.93
CCDC30-209ENST00000477155 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
CCDC30-209ENST00000477155 CRIPTQ9P021 101 aa2.95□□□□□ -1.94
CCDC30-209ENST00000477155 ROMO1P60602 79 aa2.93□□□□□ -1.94
CCDC30-209ENST00000477155 KRTAP19-1Q8IUB9 90 aa2.92□□□□□ -1.94
CCDC30-209ENST00000477155 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
CCDC30-209ENST00000477155 SPRR2GQ9BYE4 73 aa2.91□□□□□ -1.94
CCDC30-209ENST00000477155 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
CCDC30-209ENST00000477155 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
CCDC30-209ENST00000477155 KRTAP9-3Q9BYQ3 159 aa2.86□□□□□ -1.95
CCDC30-209ENST00000477155 KRTAP4-8Q9BYQ9 185 aa2.84□□□□□ -1.95
CCDC30-209ENST00000477155 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
CCDC30-209ENST00000477155 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
CCDC30-209ENST00000477155 MT1BP07438 61 aa2.81□□□□□ -1.96
CCDC30-209ENST00000477155 USH2AO75445 5202 aa2.8□□□□□ -1.96
CCDC30-209ENST00000477155 KRTAP9-2Q9BYQ4 174 aa2.76□□□□□ -1.97
CCDC30-209ENST00000477155 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.75□□□□□ -1.97
CCDC30-209ENST00000477155 TNP1P09430 55 aa2.74□□□□□ -1.97
CCDC30-209ENST00000477155 FSIP2Q5CZC0 6907 aa2.74□□□□□ -1.97
CCDC30-209ENST00000477155 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
CCDC30-209ENST00000477155 MT1XP80297 61 aa2.73□□□□□ -1.97
CCDC30-209ENST00000477155 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
CCDC30-209ENST00000477155 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
CCDC30-209ENST00000477155 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
CCDC30-209ENST00000477155 KRTAP10-7P60409 375 aaPredicted RBP2.65□□□□□ -1.98
CCDC30-209ENST00000477155 KRTAP4-8A0A0G2JLE6 195 aa2.65□□□□□ -1.99
CCDC30-209ENST00000477155 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
CCDC30-209ENST00000477155 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
CCDC30-209ENST00000477155 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
CCDC30-209ENST00000477155 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
CCDC30-209ENST00000477155 KMT2DO14686 5537 aa2.62□□□□□ -1.99
CCDC30-209ENST00000477155 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
CCDC30-209ENST00000477155 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
CCDC30-209ENST00000477155 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
CCDC30-209ENST00000477155 KRTAP23-1A1A580 65 aa2.59□□□□□ -1.99
CCDC30-209ENST00000477155 KRTAP4-7Q9BYR0 210 aa2.58□□□□□ -2
CCDC30-209ENST00000477155 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
CCDC30-209ENST00000477155 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
CCDC30-209ENST00000477155 LCE1DQ5T752 114 aa2.53□□□□□ -2.01
CCDC30-209ENST00000477155 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
CCDC30-209ENST00000477155 FCGBPQ9Y6R7 5405 aaPredicted RBP2.52□□□□□ -2.01
CCDC30-209ENST00000477155 KRTAP15-1Q3LI76 137 aa2.51□□□□□ -2.01
CCDC30-209ENST00000477155 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
CCDC30-209ENST00000477155 KRTAP4-9Q9BYQ8 210 aa2.48□□□□□ -2.01
CCDC30-209ENST00000477155 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms