RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
SMIM4-202ENST00000476842 FSIP2Q5CZC0 6907 aa8.33□□□□□ -1.08
SMIM4-202ENST00000476842 LCE2BO14633 110 aa8.29□□□□□ -1.08
SMIM4-202ENST00000476842 USH2AO75445 5202 aa8.24□□□□□ -1.09
SMIM4-202ENST00000476842 NDUFC1O43677 76 aa8.23□□□□□ -1.09
SMIM4-202ENST00000476842 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
SMIM4-202ENST00000476842 SERP2Q8N6R1 65 aa8.16□□□□□ -1.1
SMIM4-202ENST00000476842 SSPOA2VEC9 5147 aa8.12□□□□□ -1.11
SMIM4-202ENST00000476842 SNURFQ9Y675 71 aa8.11□□□□□ -1.11
SMIM4-202ENST00000476842 H0YAA0 97 aa8.1□□□□□ -1.11
SMIM4-202ENST00000476842 KRTAP19-1Q8IUB9 90 aa8.09□□□□□ -1.11
SMIM4-202ENST00000476842 C20orf197Q8N268 126 aa8.07□□□□□ -1.12
SMIM4-202ENST00000476842 ACYP2P14621 99 aa8.06□□□□□ -1.12
SMIM4-202ENST00000476842 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
SMIM4-202ENST00000476842 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
SMIM4-202ENST00000476842 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
SMIM4-202ENST00000476842 SPANXA2-OT1Q8N9U9 137 aa7.99□□□□□ -1.13
SMIM4-202ENST00000476842 COX7CP15954 63 aa7.98□□□□□ -1.13
SMIM4-202ENST00000476842 KRTAP19-6Q3LI70 58 aa7.96□□□□□ -1.14
SMIM4-202ENST00000476842 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
SMIM4-202ENST00000476842 Q5VV11 94 aa7.9□□□□□ -1.14
SMIM4-202ENST00000476842 SPTSSBQ8NFR3 76 aa7.9□□□□□ -1.14
SMIM4-202ENST00000476842 FCGBPQ9Y6R7 5405 aaPredicted RBP7.89□□□□□ -1.15
SMIM4-202ENST00000476842 MT1BP07438 61 aa7.89□□□□□ -1.15
SMIM4-202ENST00000476842 CHKB-CPT1BH3BT56 60 aa7.88□□□□□ -1.15
SMIM4-202ENST00000476842 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
SMIM4-202ENST00000476842 P0C880 135 aa7.84□□□□□ -1.15
SMIM4-202ENST00000476842 ANAPC13Q9BS18 74 aa7.82□□□□□ -1.16
SMIM4-202ENST00000476842 H7BZZ5 65 aa7.79□□□□□ -1.16
SMIM4-202ENST00000476842 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
SMIM4-202ENST00000476842 R4GN34 69 aa7.77□□□□□ -1.17
SMIM4-202ENST00000476842 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
SMIM4-202ENST00000476842 COA5Q86WW8 74 aa7.73□□□□□ -1.17
SMIM4-202ENST00000476842 M0QZ58 72 aa7.7□□□□□ -1.18
SMIM4-202ENST00000476842 A6NN06 94 aa7.68□□□□□ -1.18
SMIM4-202ENST00000476842 CCDC179H3BU77 68 aa7.67□□□□□ -1.18
SMIM4-202ENST00000476842 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
SMIM4-202ENST00000476842 PLAC4Q8WY50 150 aa7.61□□□□□ -1.19
SMIM4-202ENST00000476842 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
SMIM4-202ENST00000476842 MACF1Q9UPN3 7388 aaKnown RBP7.58□□□□□ -1.2
SMIM4-202ENST00000476842 LINC01554Q52M75 96 aa7.57□□□□□ -1.2
SMIM4-202ENST00000476842 SEC61GP60059 68 aa7.51□□□□□ -1.21
SMIM4-202ENST00000476842 ATP5EP56381 51 aaPredicted RBP7.49□□□□□ -1.21
SMIM4-202ENST00000476842 SERP1Q9Y6X1 66 aa7.49□□□□□ -1.21
SMIM4-202ENST00000476842 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
SMIM4-202ENST00000476842 MT1XP80297 61 aa7.47□□□□□ -1.21
SMIM4-202ENST00000476842 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
SMIM4-202ENST00000476842 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
SMIM4-202ENST00000476842 TMEM258P61165 79 aa7.4□□□□□ -1.22
SMIM4-202ENST00000476842 KRTAP6-3Q3LI67 103 aa7.39□□□□□ -1.23
SMIM4-202ENST00000476842 A0A1B0GU33 70 aa7.36□□□□□ -1.23
SMIM4-202ENST00000476842 A0A1B0GU69 56 aa7.33□□□□□ -1.24
SMIM4-202ENST00000476842 SPATA8Q6RVD6 105 aa7.28□□□□□ -1.24
SMIM4-202ENST00000476842 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
SMIM4-202ENST00000476842 A0A0D9SG42 100 aa7.23□□□□□ -1.25
SMIM4-202ENST00000476842 LINC01558Q9Y6Z2 57 aa7.22□□□□□ -1.25
SMIM4-202ENST00000476842 PRR15LQ9BU68 103 aa7.2□□□□□ -1.26
SMIM4-202ENST00000476842 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
SMIM4-202ENST00000476842 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
SMIM4-202ENST00000476842 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
SMIM4-202ENST00000476842 KRTAP12-1P59990 96 aa7.12□□□□□ -1.27
SMIM4-202ENST00000476842 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
SMIM4-202ENST00000476842 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
SMIM4-202ENST00000476842 KMT2DO14686 5537 aa7.11□□□□□ -1.27
SMIM4-202ENST00000476842 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
SMIM4-202ENST00000476842 A8MU10 97 aa7.06□□□□□ -1.28
SMIM4-202ENST00000476842 KRTAP8-1Q8IUC2 63 aa7.06□□□□□ -1.28
SMIM4-202ENST00000476842 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
SMIM4-202ENST00000476842 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
SMIM4-202ENST00000476842 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
SMIM4-202ENST00000476842 PCP4P48539 62 aa6.99□□□□□ -1.29
SMIM4-202ENST00000476842 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
SMIM4-202ENST00000476842 UQCR11O14957 56 aa6.98□□□□□ -1.29
SMIM4-202ENST00000476842 V9GYY9 64 aa6.97□□□□□ -1.29
SMIM4-202ENST00000476842 NEBP20929 6669 aa6.96□□□□□ -1.3
SMIM4-202ENST00000476842 Q1T7F1 81 aa6.94□□□□□ -1.3
SMIM4-202ENST00000476842 MDN1Q9NU22 5596 aa6.9□□□□□ -1.3
SMIM4-202ENST00000476842 PSPHP1O15172 72 aa6.85□□□□□ -1.31
SMIM4-202ENST00000476842 RPS28P62857 69 aaKnown RBP6.85□□□□□ -1.31
SMIM4-202ENST00000476842 MIR22HGQ0VDD5 57 aa6.84□□□□□ -1.31
SMIM4-202ENST00000476842 SPRR2EP22531 72 aa6.81□□□□□ -1.32
SMIM4-202ENST00000476842 SPRR2BP35325 72 aa6.81□□□□□ -1.32
SMIM4-202ENST00000476842 SPRR2AP35326 72 aa6.81□□□□□ -1.32
SMIM4-202ENST00000476842 LCE1AQ5T7P2 110 aa6.79□□□□□ -1.32
SMIM4-202ENST00000476842 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
SMIM4-202ENST00000476842 TNP1P09430 55 aa6.71□□□□□ -1.34
SMIM4-202ENST00000476842 KRTAP20-1Q3LI63 56 aa6.67□□□□□ -1.34
SMIM4-202ENST00000476842 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
SMIM4-202ENST00000476842 K7ERS5 55 aa6.66□□□□□ -1.34
SMIM4-202ENST00000476842 A6NED7 52 aa6.64□□□□□ -1.35
SMIM4-202ENST00000476842 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
SMIM4-202ENST00000476842 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
SMIM4-202ENST00000476842 MT1EP04732 61 aa6.6□□□□□ -1.35
SMIM4-202ENST00000476842 SPRR2DP22532 72 aa6.59□□□□□ -1.35
SMIM4-202ENST00000476842 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
SMIM4-202ENST00000476842 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
SMIM4-202ENST00000476842 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
SMIM4-202ENST00000476842 KRTAP19-3Q7Z4W3 81 aa6.48□□□□□ -1.37
SMIM4-202ENST00000476842 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
SMIM4-202ENST00000476842 KRTAP2-2Q9BYT5 123 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms