RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
APOBEC3F-203ENST00000476513 TMEM254Q8TBM7 123 aa7.24□□□□□ -1.25
APOBEC3F-203ENST00000476513 MMP24-AS1A0A0U1RRL7 71 aa7.23□□□□□ -1.25
APOBEC3F-203ENST00000476513 CCDC179H3BU77 68 aa7.23□□□□□ -1.25
APOBEC3F-203ENST00000476513 UQCRQO14949 82 aa7.23□□□□□ -1.25
APOBEC3F-203ENST00000476513 COX7CP15954 63 aa7.23□□□□□ -1.25
APOBEC3F-203ENST00000476513 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
APOBEC3F-203ENST00000476513 NDUFS5O43920 106 aa7.21□□□□□ -1.26
APOBEC3F-203ENST00000476513 C4orf26Q17RF5 130 aa7.21□□□□□ -1.26
APOBEC3F-203ENST00000476513 SERP2Q8N6R1 65 aa7.21□□□□□ -1.26
APOBEC3F-203ENST00000476513 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
APOBEC3F-203ENST00000476513 KRTAP2-2Q9BYT5 123 aa7.21□□□□□ -1.26
APOBEC3F-203ENST00000476513 KRTAP2-1Q9BYU5 128 aa7.21□□□□□ -1.26
APOBEC3F-203ENST00000476513 BPY2O14599 106 aa7.2□□□□□ -1.26
APOBEC3F-203ENST00000476513 SMIM20Q8N5G0 67 aa7.2□□□□□ -1.26
APOBEC3F-203ENST00000476513 Q5W150 140 aa7.19□□□□□ -1.26
APOBEC3F-203ENST00000476513 hDV103S1A0JD37 113 aa7.17□□□□□ -1.26
APOBEC3F-203ENST00000476513 KLKP1Q107X0 134 aa7.15□□□□□ -1.26
APOBEC3F-203ENST00000476513 CSAG1Q6PB30 78 aa7.15□□□□□ -1.26
APOBEC3F-203ENST00000476513 TRAV7A0A075B6U4 112 aa7.14□□□□□ -1.27
APOBEC3F-203ENST00000476513 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
APOBEC3F-203ENST00000476513 S4R3F8 94 aa7.12□□□□□ -1.27
APOBEC3F-203ENST00000476513 K7EQZ3 153 aa7.09□□□□□ -1.27
APOBEC3F-203ENST00000476513 LCE1AQ5T7P2 110 aa7.09□□□□□ -1.27
APOBEC3F-203ENST00000476513 LCA10Q71F78 164 aa7.08□□□□□ -1.28
APOBEC3F-203ENST00000476513 Q8N9L7 120 aa7.08□□□□□ -1.28
APOBEC3F-203ENST00000476513 OCR1Q9BZK8 76 aa7.04□□□□□ -1.28
APOBEC3F-203ENST00000476513 HCG22E2RYF7 251 aa7.02□□□□□ -1.29
APOBEC3F-203ENST00000476513 SPRR2DP22532 72 aa7.01□□□□□ -1.29
APOBEC3F-203ENST00000476513 TMEM258P61165 79 aa7.01□□□□□ -1.29
APOBEC3F-203ENST00000476513 GPR98Q8WXG9 6306 aa7□□□□□ -1.29
APOBEC3F-203ENST00000476513 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
APOBEC3F-203ENST00000476513 C20orf197Q8N268 126 aa7□□□□□ -1.29
APOBEC3F-203ENST00000476513 CRIPTQ9P021 101 aa7□□□□□ -1.29
APOBEC3F-203ENST00000476513 C1orf64Q8NEQ6 169 aa6.99□□□□□ -1.29
APOBEC3F-203ENST00000476513 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
APOBEC3F-203ENST00000476513 NDUFC1O43677 76 aa6.97□□□□□ -1.29
APOBEC3F-203ENST00000476513 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
APOBEC3F-203ENST00000476513 KRTAP3-3Q9BYR6 98 aa6.94□□□□□ -1.3
APOBEC3F-203ENST00000476513 H7BZZ5 65 aa6.92□□□□□ -1.3
APOBEC3F-203ENST00000476513 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
APOBEC3F-203ENST00000476513 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
APOBEC3F-203ENST00000476513 MT1XP80297 61 aa6.91□□□□□ -1.3
APOBEC3F-203ENST00000476513 SNURFQ9Y675 71 aa6.9□□□□□ -1.3
APOBEC3F-203ENST00000476513 ATP5EP56381 51 aaPredicted RBP6.88□□□□□ -1.31
APOBEC3F-203ENST00000476513 H3BPC8 53 aa6.86□□□□□ -1.31
APOBEC3F-203ENST00000476513 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
APOBEC3F-203ENST00000476513 MP68P56378 58 aa6.84□□□□□ -1.31
APOBEC3F-203ENST00000476513 TP53AIP1Q9HCN2 124 aa6.84□□□□□ -1.31
APOBEC3F-203ENST00000476513 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
APOBEC3F-203ENST00000476513 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
APOBEC3F-203ENST00000476513 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
APOBEC3F-203ENST00000476513 SERP1Q9Y6X1 66 aa6.79□□□□□ -1.32
APOBEC3F-203ENST00000476513 H0Y9P7 68 aa6.78□□□□□ -1.32
APOBEC3F-203ENST00000476513 TRAV22A0A0B4J277 110 aa6.76□□□□□ -1.33
APOBEC3F-203ENST00000476513 A8MUN3 132 aa6.74□□□□□ -1.33
APOBEC3F-203ENST00000476513 LINC00208Q96KT6 92 aa6.74□□□□□ -1.33
APOBEC3F-203ENST00000476513 PLAC4Q8WY50 150 aa6.73□□□□□ -1.33
APOBEC3F-203ENST00000476513 H0YAA0 97 aa6.72□□□□□ -1.33
APOBEC3F-203ENST00000476513 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.34
APOBEC3F-203ENST00000476513 CYP4F30PQ9H0H9 118 aa6.71□□□□□ -1.34
APOBEC3F-203ENST00000476513 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
APOBEC3F-203ENST00000476513 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
APOBEC3F-203ENST00000476513 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.34
APOBEC3F-203ENST00000476513 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
APOBEC3F-203ENST00000476513 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
APOBEC3F-203ENST00000476513 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
APOBEC3F-203ENST00000476513 KRTAP4-9Q9BYQ8 210 aa6.55□□□□□ -1.36
APOBEC3F-203ENST00000476513 R4GN34 69 aa6.51□□□□□ -1.37
APOBEC3F-203ENST00000476513 Q1T7F1 81 aa6.47□□□□□ -1.37
APOBEC3F-203ENST00000476513 COA5Q86WW8 74 aa6.46□□□□□ -1.38
APOBEC3F-203ENST00000476513 V9GYY9 64 aa6.45□□□□□ -1.38
APOBEC3F-203ENST00000476513 M0QZ58 72 aa6.44□□□□□ -1.38
APOBEC3F-203ENST00000476513 P0C880 135 aa6.43□□□□□ -1.38
APOBEC3F-203ENST00000476513 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
APOBEC3F-203ENST00000476513 ACYP2P14621 99 aa6.41□□□□□ -1.38
APOBEC3F-203ENST00000476513 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
APOBEC3F-203ENST00000476513 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
APOBEC3F-203ENST00000476513 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
APOBEC3F-203ENST00000476513 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
APOBEC3F-203ENST00000476513 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
APOBEC3F-203ENST00000476513 CHKB-CPT1BH3BT56 60 aa6.28□□□□□ -1.4
APOBEC3F-203ENST00000476513 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
APOBEC3F-203ENST00000476513 PSPHP1O15172 72 aa6.25□□□□□ -1.41
APOBEC3F-203ENST00000476513 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
APOBEC3F-203ENST00000476513 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
APOBEC3F-203ENST00000476513 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.41
APOBEC3F-203ENST00000476513 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
APOBEC3F-203ENST00000476513 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
APOBEC3F-203ENST00000476513 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
APOBEC3F-203ENST00000476513 MT4P47944 62 aa6.18□□□□□ -1.42
APOBEC3F-203ENST00000476513 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
APOBEC3F-203ENST00000476513 MT1EP04732 61 aa6.16□□□□□ -1.42
APOBEC3F-203ENST00000476513 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
APOBEC3F-203ENST00000476513 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
APOBEC3F-203ENST00000476513 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
APOBEC3F-203ENST00000476513 A0A1B0GU69 56 aa6.1□□□□□ -1.43
APOBEC3F-203ENST00000476513 A6NED7 52 aa6.09□□□□□ -1.43
APOBEC3F-203ENST00000476513 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
APOBEC3F-203ENST00000476513 SEC61GP60059 68 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms