RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 TMEM258P61165 79 aa9.27□□□□□ -0.93
NR1H3-219ENST00000476086 LCA10Q71F78 164 aa9.25□□□□□ -0.93
NR1H3-219ENST00000476086 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
NR1H3-219ENST00000476086 CHKB-CPT1BH3BT56 60 aa9.21□□□□□ -0.94
NR1H3-219ENST00000476086 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
NR1H3-219ENST00000476086 FLGP20930 4061 aaPredicted RBP9.2□□□□□ -0.94
NR1H3-219ENST00000476086 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
NR1H3-219ENST00000476086 COA5Q86WW8 74 aa9.15□□□□□ -0.94
NR1H3-219ENST00000476086 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.94
NR1H3-219ENST00000476086 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
NR1H3-219ENST00000476086 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
NR1H3-219ENST00000476086 SERP1Q9Y6X1 66 aa8.98□□□□□ -0.97
NR1H3-219ENST00000476086 H0YAA0 97 aa8.96□□□□□ -0.98
NR1H3-219ENST00000476086 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
NR1H3-219ENST00000476086 MT2AP02795 61 aa8.87□□□□□ -0.99
NR1H3-219ENST00000476086 ADM2Q7Z4H4 148 aa8.85□□□□□ -0.99
NR1H3-219ENST00000476086 KRTAP10-10P60014 251 aa8.84□□□□□ -0.99
NR1H3-219ENST00000476086 SEC61GP60059 68 aa8.82□□□□□ -1
NR1H3-219ENST00000476086 MT1FP04733 61 aa8.79□□□□□ -1
NR1H3-219ENST00000476086 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
NR1H3-219ENST00000476086 CRIPTQ9P021 101 aa8.73□□□□□ -1.01
NR1H3-219ENST00000476086 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
NR1H3-219ENST00000476086 A0A1B0GU69 56 aa8.71□□□□□ -1.02
NR1H3-219ENST00000476086 P0C880 135 aa8.7□□□□□ -1.02
NR1H3-219ENST00000476086 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
NR1H3-219ENST00000476086 LINC01558Q9Y6Z2 57 aa8.69□□□□□ -1.02
NR1H3-219ENST00000476086 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
NR1H3-219ENST00000476086 V9GYY9 64 aa8.68□□□□□ -1.02
NR1H3-219ENST00000476086 KRTAP9-3Q9BYQ3 159 aa8.62□□□□□ -1.03
NR1H3-219ENST00000476086 R4GN34 69 aa8.61□□□□□ -1.03
NR1H3-219ENST00000476086 Q1T7F1 81 aa8.6□□□□□ -1.03
NR1H3-219ENST00000476086 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
NR1H3-219ENST00000476086 M0QZ58 72 aa8.56□□□□□ -1.04
NR1H3-219ENST00000476086 SPRR2GQ9BYE4 73 aa8.56□□□□□ -1.04
NR1H3-219ENST00000476086 A0A1B0GU33 70 aa8.54□□□□□ -1.04
NR1H3-219ENST00000476086 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
NR1H3-219ENST00000476086 PSPHP1O15172 72 aa8.44□□□□□ -1.06
NR1H3-219ENST00000476086 Q5VV11 94 aa8.44□□□□□ -1.06
NR1H3-219ENST00000476086 KRTAP9-2Q9BYQ4 174 aa8.43□□□□□ -1.06
NR1H3-219ENST00000476086 LCE2BO14633 110 aa8.42□□□□□ -1.06
NR1H3-219ENST00000476086 UQCR11O14957 56 aa8.38□□□□□ -1.07
NR1H3-219ENST00000476086 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
NR1H3-219ENST00000476086 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
NR1H3-219ENST00000476086 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
NR1H3-219ENST00000476086 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
NR1H3-219ENST00000476086 A6NN06 94 aa8.28□□□□□ -1.08
NR1H3-219ENST00000476086 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
NR1H3-219ENST00000476086 A0A0D9SG42 100 aa8.25□□□□□ -1.09
NR1H3-219ENST00000476086 MT1BP07438 61 aa8.25□□□□□ -1.09
NR1H3-219ENST00000476086 A6NED7 52 aa8.23□□□□□ -1.09
NR1H3-219ENST00000476086 MIR22HGQ0VDD5 57 aa8.23□□□□□ -1.09
NR1H3-219ENST00000476086 KRTAP9-6A0A140TA67 174 aa8.22□□□□□ -1.09
NR1H3-219ENST00000476086 A8MU10 97 aa8.16□□□□□ -1.1
NR1H3-219ENST00000476086 USH2AO75445 5202 aa8.11□□□□□ -1.11
NR1H3-219ENST00000476086 SPINT4Q6UDR6 99 aa8.11□□□□□ -1.11
NR1H3-219ENST00000476086 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
NR1H3-219ENST00000476086 CRCT1Q9UGL9 99 aa8.06□□□□□ -1.12
NR1H3-219ENST00000476086 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
NR1H3-219ENST00000476086 CAMK2N1Q7Z7J9 78 aa8.03□□□□□ -1.12
NR1H3-219ENST00000476086 K7ERS5 55 aa8.02□□□□□ -1.13
NR1H3-219ENST00000476086 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
NR1H3-219ENST00000476086 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
NR1H3-219ENST00000476086 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
NR1H3-219ENST00000476086 FSIP2Q5CZC0 6907 aa7.96□□□□□ -1.13
NR1H3-219ENST00000476086 KRTAP10-5P60370 271 aa7.96□□□□□ -1.14
NR1H3-219ENST00000476086 SSPOA2VEC9 5147 aa7.91□□□□□ -1.14
NR1H3-219ENST00000476086 MT1XP80297 61 aa7.9□□□□□ -1.14
NR1H3-219ENST00000476086 BRK1Q8WUW1 75 aa7.84□□□□□ -1.15
NR1H3-219ENST00000476086 FCGBPQ9Y6R7 5405 aaPredicted RBP7.68□□□□□ -1.18
NR1H3-219ENST00000476086 C10orf95Q9H7T3 257 aa7.65□□□□□ -1.18
NR1H3-219ENST00000476086 TNP1P09430 55 aa7.59□□□□□ -1.19
NR1H3-219ENST00000476086 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
NR1H3-219ENST00000476086 ROMO1P60602 79 aa7.54□□□□□ -1.2
NR1H3-219ENST00000476086 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
NR1H3-219ENST00000476086 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
NR1H3-219ENST00000476086 PRO0628Q9UI54 55 aa7.49□□□□□ -1.21
NR1H3-219ENST00000476086 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
NR1H3-219ENST00000476086 PMAIP1Q13794 54 aa7.43□□□□□ -1.22
NR1H3-219ENST00000476086 KRTAP9-7A8MTY7 169 aa7.37□□□□□ -1.23
NR1H3-219ENST00000476086 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
NR1H3-219ENST00000476086 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
NR1H3-219ENST00000476086 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
NR1H3-219ENST00000476086 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
NR1H3-219ENST00000476086 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
NR1H3-219ENST00000476086 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
NR1H3-219ENST00000476086 KRTAP6-3Q3LI67 103 aa7.22□□□□□ -1.25
NR1H3-219ENST00000476086 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
NR1H3-219ENST00000476086 KMT2DO14686 5537 aa7.16□□□□□ -1.26
NR1H3-219ENST00000476086 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
NR1H3-219ENST00000476086 SPRR2FQ96RM1 72 aa7.11□□□□□ -1.27
NR1H3-219ENST00000476086 KRTAP19-5Q3LI72 72 aa7.06□□□□□ -1.28
NR1H3-219ENST00000476086 KRTAP19-7Q3SYF9 63 aa7.05□□□□□ -1.28
NR1H3-219ENST00000476086 SYNE2Q8WXH0 6885 aaKnown RBP7.03□□□□□ -1.28
NR1H3-219ENST00000476086 KRTAP12-3P60328 96 aa7□□□□□ -1.29
NR1H3-219ENST00000476086 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
NR1H3-219ENST00000476086 MT1EP04732 61 aa6.96□□□□□ -1.3
NR1H3-219ENST00000476086 PRAC1Q96KF2 57 aa6.9□□□□□ -1.3
NR1H3-219ENST00000476086 SPRR2EP22531 72 aa6.86□□□□□ -1.31
NR1H3-219ENST00000476086 SPRR2BP35325 72 aa6.86□□□□□ -1.31
NR1H3-219ENST00000476086 SPRR2AP35326 72 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms