RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 MP68P56378 58 aa6.76□□□□□ -1.33
FAM3A-218ENST00000475657 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
FAM3A-218ENST00000475657 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
FAM3A-218ENST00000475657 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
FAM3A-218ENST00000475657 H3BPC8 53 aa6.73□□□□□ -1.33
FAM3A-218ENST00000475657 SERP2Q8N6R1 65 aa6.73□□□□□ -1.33
FAM3A-218ENST00000475657 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
FAM3A-218ENST00000475657 LINC00208Q96KT6 92 aa6.7□□□□□ -1.34
FAM3A-218ENST00000475657 CYP4F30PQ9H0H9 118 aa6.68□□□□□ -1.34
FAM3A-218ENST00000475657 ANAPC13Q9BS18 74 aa6.65□□□□□ -1.34
FAM3A-218ENST00000475657 COX7CP15954 63 aa6.64□□□□□ -1.35
FAM3A-218ENST00000475657 MDN1Q9NU22 5596 aa6.64□□□□□ -1.35
FAM3A-218ENST00000475657 KMT2DO14686 5537 aa6.62□□□□□ -1.35
FAM3A-218ENST00000475657 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
FAM3A-218ENST00000475657 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
FAM3A-218ENST00000475657 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.35
FAM3A-218ENST00000475657 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
FAM3A-218ENST00000475657 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.35
FAM3A-218ENST00000475657 C4orf26Q17RF5 130 aa6.57□□□□□ -1.36
FAM3A-218ENST00000475657 SNURFQ9Y675 71 aa6.57□□□□□ -1.36
FAM3A-218ENST00000475657 A6NN06 94 aa6.54□□□□□ -1.36
FAM3A-218ENST00000475657 PCP4P48539 62 aa6.54□□□□□ -1.36
FAM3A-218ENST00000475657 NDUFC1O43677 76 aa6.5□□□□□ -1.37
FAM3A-218ENST00000475657 A8MUN3 132 aa6.49□□□□□ -1.37
FAM3A-218ENST00000475657 CCDC179H3BU77 68 aa6.48□□□□□ -1.37
FAM3A-218ENST00000475657 H1FX-AS1Q4G0G2 97 aa6.48□□□□□ -1.37
FAM3A-218ENST00000475657 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
FAM3A-218ENST00000475657 SPANXA2-OT1Q8N9U9 137 aa6.46□□□□□ -1.38
FAM3A-218ENST00000475657 H7BZZ5 65 aa6.44□□□□□ -1.38
FAM3A-218ENST00000475657 DMAC1Q96GE9 116 aa6.44□□□□□ -1.38
FAM3A-218ENST00000475657 CYSTM1Q9H1C7 97 aa6.44□□□□□ -1.38
FAM3A-218ENST00000475657 S4R3F8 94 aa6.38□□□□□ -1.39
FAM3A-218ENST00000475657 MT1BP07438 61 aa6.37□□□□□ -1.39
FAM3A-218ENST00000475657 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
FAM3A-218ENST00000475657 ACYP2P14621 99 aa6.35□□□□□ -1.39
FAM3A-218ENST00000475657 KRTAP2-2Q9BYT5 123 aa6.34□□□□□ -1.39
FAM3A-218ENST00000475657 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
FAM3A-218ENST00000475657 Q5VV11 94 aa6.33□□□□□ -1.4
FAM3A-218ENST00000475657 LCA10Q71F78 164 aa6.33□□□□□ -1.4
FAM3A-218ENST00000475657 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
FAM3A-218ENST00000475657 TMEM258P61165 79 aa6.31□□□□□ -1.4
FAM3A-218ENST00000475657 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
FAM3A-218ENST00000475657 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
FAM3A-218ENST00000475657 SPRR2EP22531 72 aa6.26□□□□□ -1.41
FAM3A-218ENST00000475657 SPRR2BP35325 72 aa6.26□□□□□ -1.41
FAM3A-218ENST00000475657 SPRR2AP35326 72 aa6.26□□□□□ -1.41
FAM3A-218ENST00000475657 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
FAM3A-218ENST00000475657 GPR98Q8WXG9 6306 aa6.26□□□□□ -1.41
FAM3A-218ENST00000475657 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
FAM3A-218ENST00000475657 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
FAM3A-218ENST00000475657 COA5Q86WW8 74 aa6.23□□□□□ -1.41
FAM3A-218ENST00000475657 SPTSSBQ8NFR3 76 aa6.21□□□□□ -1.42
FAM3A-218ENST00000475657 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
FAM3A-218ENST00000475657 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
FAM3A-218ENST00000475657 H0YAA0 97 aa6.14□□□□□ -1.43
FAM3A-218ENST00000475657 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
FAM3A-218ENST00000475657 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
FAM3A-218ENST00000475657 SPRR2DP22532 72 aa6.06□□□□□ -1.44
FAM3A-218ENST00000475657 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
FAM3A-218ENST00000475657 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
FAM3A-218ENST00000475657 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
FAM3A-218ENST00000475657 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
FAM3A-218ENST00000475657 SEC61GP60059 68 aa5.96□□□□□ -1.46
FAM3A-218ENST00000475657 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.46
FAM3A-218ENST00000475657 P0C880 135 aa5.95□□□□□ -1.46
FAM3A-218ENST00000475657 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
FAM3A-218ENST00000475657 A0A1B0GU69 56 aa5.91□□□□□ -1.46
FAM3A-218ENST00000475657 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
FAM3A-218ENST00000475657 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
FAM3A-218ENST00000475657 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
FAM3A-218ENST00000475657 DSTQ03001 7570 aaKnown RBP5.9□□□□□ -1.47
FAM3A-218ENST00000475657 PRR15LQ9BU68 103 aa5.88□□□□□ -1.47
FAM3A-218ENST00000475657 R4GN34 69 aa5.87□□□□□ -1.47
FAM3A-218ENST00000475657 V9GYY9 64 aa5.87□□□□□ -1.47
FAM3A-218ENST00000475657 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
FAM3A-218ENST00000475657 Q1T7F1 81 aa5.84□□□□□ -1.47
FAM3A-218ENST00000475657 M0QZ58 72 aa5.83□□□□□ -1.48
FAM3A-218ENST00000475657 MT1XP80297 61 aa5.83□□□□□ -1.48
FAM3A-218ENST00000475657 A0A1B0GU33 70 aa5.81□□□□□ -1.48
FAM3A-218ENST00000475657 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
FAM3A-218ENST00000475657 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
FAM3A-218ENST00000475657 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
FAM3A-218ENST00000475657 PSPHP1O15172 72 aa5.72□□□□□ -1.49
FAM3A-218ENST00000475657 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
FAM3A-218ENST00000475657 UQCR11O14957 56 aa5.69□□□□□ -1.5
FAM3A-218ENST00000475657 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
FAM3A-218ENST00000475657 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
FAM3A-218ENST00000475657 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
FAM3A-218ENST00000475657 A0A0D9SG42 100 aa5.61□□□□□ -1.51
FAM3A-218ENST00000475657 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
FAM3A-218ENST00000475657 A6NED7 52 aa5.58□□□□□ -1.52
FAM3A-218ENST00000475657 A8MU10 97 aa5.57□□□□□ -1.52
FAM3A-218ENST00000475657 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
FAM3A-218ENST00000475657 HMCN1Q96RW7 5635 aa5.54□□□□□ -1.52
FAM3A-218ENST00000475657 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
FAM3A-218ENST00000475657 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
FAM3A-218ENST00000475657 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
FAM3A-218ENST00000475657 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
FAM3A-218ENST00000475657 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
FAM3A-218ENST00000475657 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms