RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
MCF2L-224ENST00000475524 CYSTM1Q9H1C7 97 aa7.31□□□□□ -1.24
MCF2L-224ENST00000475524 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
MCF2L-224ENST00000475524 CSAG1Q6PB30 78 aa7.28□□□□□ -1.24
MCF2L-224ENST00000475524 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
MCF2L-224ENST00000475524 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
MCF2L-224ENST00000475524 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
MCF2L-224ENST00000475524 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
MCF2L-224ENST00000475524 TMEM258P61165 79 aa7.18□□□□□ -1.26
MCF2L-224ENST00000475524 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
MCF2L-224ENST00000475524 H0YAA0 97 aa7.15□□□□□ -1.26
MCF2L-224ENST00000475524 MT2AP02795 61 aa7.14□□□□□ -1.27
MCF2L-224ENST00000475524 COA5Q86WW8 74 aa7.13□□□□□ -1.27
MCF2L-224ENST00000475524 PCP4P48539 62 aa7.12□□□□□ -1.27
MCF2L-224ENST00000475524 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
MCF2L-224ENST00000475524 MT1FP04733 61 aa7.07□□□□□ -1.28
MCF2L-224ENST00000475524 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
MCF2L-224ENST00000475524 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
MCF2L-224ENST00000475524 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
MCF2L-224ENST00000475524 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
MCF2L-224ENST00000475524 KRTAP9-3Q9BYQ3 159 aa6.96□□□□□ -1.3
MCF2L-224ENST00000475524 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
MCF2L-224ENST00000475524 SERP1Q9Y6X1 66 aa6.94□□□□□ -1.3
MCF2L-224ENST00000475524 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
MCF2L-224ENST00000475524 P0C880 135 aa6.87□□□□□ -1.31
MCF2L-224ENST00000475524 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
MCF2L-224ENST00000475524 SEC61GP60059 68 aa6.86□□□□□ -1.31
MCF2L-224ENST00000475524 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
MCF2L-224ENST00000475524 LCE2BO14633 110 aa6.79□□□□□ -1.32
MCF2L-224ENST00000475524 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
MCF2L-224ENST00000475524 R4GN34 69 aa6.79□□□□□ -1.32
MCF2L-224ENST00000475524 LINC01558Q9Y6Z2 57 aa6.78□□□□□ -1.32
MCF2L-224ENST00000475524 A0A1B0GU69 56 aa6.77□□□□□ -1.33
MCF2L-224ENST00000475524 M0QZ58 72 aa6.76□□□□□ -1.33
MCF2L-224ENST00000475524 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
MCF2L-224ENST00000475524 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
MCF2L-224ENST00000475524 V9GYY9 64 aa6.73□□□□□ -1.33
MCF2L-224ENST00000475524 SMIM26A0A096LP01 95 aa6.71□□□□□ -1.34
MCF2L-224ENST00000475524 Q5VV11 94 aa6.71□□□□□ -1.34
MCF2L-224ENST00000475524 FSIP2Q5CZC0 6907 aa6.68□□□□□ -1.34
MCF2L-224ENST00000475524 A0A1B0GU33 70 aa6.67□□□□□ -1.34
MCF2L-224ENST00000475524 Q1T7F1 81 aa6.67□□□□□ -1.34
MCF2L-224ENST00000475524 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
MCF2L-224ENST00000475524 MT1BP07438 61 aa6.64□□□□□ -1.35
MCF2L-224ENST00000475524 A6NN06 94 aa6.6□□□□□ -1.35
MCF2L-224ENST00000475524 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
MCF2L-224ENST00000475524 LINC01554Q52M75 96 aa6.56□□□□□ -1.36
MCF2L-224ENST00000475524 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
MCF2L-224ENST00000475524 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
MCF2L-224ENST00000475524 USH2AO75445 5202 aa6.52□□□□□ -1.37
MCF2L-224ENST00000475524 UQCR11O14957 56 aa6.52□□□□□ -1.37
MCF2L-224ENST00000475524 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
MCF2L-224ENST00000475524 PSPHP1O15172 72 aa6.49□□□□□ -1.37
MCF2L-224ENST00000475524 A0A0D9SG42 100 aa6.42□□□□□ -1.38
MCF2L-224ENST00000475524 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
MCF2L-224ENST00000475524 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
MCF2L-224ENST00000475524 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
MCF2L-224ENST00000475524 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
MCF2L-224ENST00000475524 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
MCF2L-224ENST00000475524 A8MU10 97 aa6.36□□□□□ -1.39
MCF2L-224ENST00000475524 MT1XP80297 61 aa6.34□□□□□ -1.39
MCF2L-224ENST00000475524 A6NED7 52 aa6.33□□□□□ -1.4
MCF2L-224ENST00000475524 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
MCF2L-224ENST00000475524 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
MCF2L-224ENST00000475524 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
MCF2L-224ENST00000475524 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
MCF2L-224ENST00000475524 K7ERS5 55 aa6.22□□□□□ -1.41
MCF2L-224ENST00000475524 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
MCF2L-224ENST00000475524 FCGBPQ9Y6R7 5405 aaPredicted RBP6.2□□□□□ -1.42
MCF2L-224ENST00000475524 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
MCF2L-224ENST00000475524 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
MCF2L-224ENST00000475524 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
MCF2L-224ENST00000475524 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
MCF2L-224ENST00000475524 TNP1P09430 55 aa5.97□□□□□ -1.45
MCF2L-224ENST00000475524 BRK1Q8WUW1 75 aa5.96□□□□□ -1.46
MCF2L-224ENST00000475524 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
MCF2L-224ENST00000475524 KRTAP6-3Q3LI67 103 aa5.9□□□□□ -1.46
MCF2L-224ENST00000475524 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.47
MCF2L-224ENST00000475524 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
MCF2L-224ENST00000475524 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
MCF2L-224ENST00000475524 ROMO1P60602 79 aa5.86□□□□□ -1.47
MCF2L-224ENST00000475524 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
MCF2L-224ENST00000475524 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
MCF2L-224ENST00000475524 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
MCF2L-224ENST00000475524 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
MCF2L-224ENST00000475524 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
MCF2L-224ENST00000475524 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.5
MCF2L-224ENST00000475524 PRO0628Q9UI54 55 aa5.7□□□□□ -1.5
MCF2L-224ENST00000475524 KMT2DO14686 5537 aa5.66□□□□□ -1.5
MCF2L-224ENST00000475524 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
MCF2L-224ENST00000475524 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
MCF2L-224ENST00000475524 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
MCF2L-224ENST00000475524 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
MCF2L-224ENST00000475524 MT1EP04732 61 aa5.59□□□□□ -1.51
MCF2L-224ENST00000475524 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
MCF2L-224ENST00000475524 LCE1AQ5T7P2 110 aa5.54□□□□□ -1.52
MCF2L-224ENST00000475524 NEBP20929 6669 aa5.52□□□□□ -1.53
MCF2L-224ENST00000475524 SPRR2EP22531 72 aa5.52□□□□□ -1.53
MCF2L-224ENST00000475524 SPRR2BP35325 72 aa5.52□□□□□ -1.53
MCF2L-224ENST00000475524 SPRR2AP35326 72 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms