RNA–Protein interactions for RNA: ENST00000474952.5

TFAP2A-210, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-210ENST00000474952 S4R3F8 94 aa12.3□□□□□ -0.44
TFAP2A-210ENST00000474952 LCA10Q71F78 164 aa12.28□□□□□ -0.44
TFAP2A-210ENST00000474952 LINC01558Q9Y6Z2 57 aa12.26□□□□□ -0.45
TFAP2A-210ENST00000474952 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
TFAP2A-210ENST00000474952 KRTAP19-2Q3LHN2 52 aa12.22□□□□□ -0.45
TFAP2A-210ENST00000474952 PSPHP1O15172 72 aa12.16□□□□□ -0.46
TFAP2A-210ENST00000474952 PRR15LQ9BU68 103 aa12.16□□□□□ -0.46
TFAP2A-210ENST00000474952 MUC2Q02817 5179 aa12.1□□□□□ -0.47
TFAP2A-210ENST00000474952 A0A1B0GU69 56 aa12.07□□□□□ -0.48
TFAP2A-210ENST00000474952 UBR4Q5T4S7 5183 aa12.05□□□□□ -0.48
TFAP2A-210ENST00000474952 Q5VV11 94 aa12.05□□□□□ -0.48
TFAP2A-210ENST00000474952 RNF213Q63HN8 5207 aa12.04□□□□□ -0.48
TFAP2A-210ENST00000474952 CSAG1Q6PB30 78 aa12.01□□□□□ -0.49
TFAP2A-210ENST00000474952 SEC61GP60059 68 aa11.98□□□□□ -0.49
TFAP2A-210ENST00000474952 LCE2CQ5TA81 110 aa11.93□□□□□ -0.5
TFAP2A-210ENST00000474952 FLGP20930 4061 aaPredicted RBP11.88□□□□□ -0.51
TFAP2A-210ENST00000474952 KRTAP3-2Q9BYR7 98 aa11.81□□□□□ -0.52
TFAP2A-210ENST00000474952 A6NED7 52 aa11.78□□□□□ -0.52
TFAP2A-210ENST00000474952 KRTAP10-6P60371 365 aaPredicted RBP11.78□□□□□ -0.52
TFAP2A-210ENST00000474952 ADM2Q7Z4H4 148 aa11.75□□□□□ -0.53
TFAP2A-210ENST00000474952 H0YAA0 97 aa11.75□□□□□ -0.53
TFAP2A-210ENST00000474952 A0A1B0GU33 70 aa11.7□□□□□ -0.54
TFAP2A-210ENST00000474952 UQCR11O14957 56 aa11.7□□□□□ -0.54
TFAP2A-210ENST00000474952 P0C880 135 aa11.7□□□□□ -0.54
TFAP2A-210ENST00000474952 MT1HP80294 61 aa11.68□□□□□ -0.54
TFAP2A-210ENST00000474952 BRK1Q8WUW1 75 aa11.66□□□□□ -0.54
TFAP2A-210ENST00000474952 FAT4Q6V0I7 4981 aa11.63□□□□□ -0.55
TFAP2A-210ENST00000474952 MIR22HGQ0VDD5 57 aa11.57□□□□□ -0.56
TFAP2A-210ENST00000474952 CDC42SE1Q9NRR8 79 aa11.57□□□□□ -0.56
TFAP2A-210ENST00000474952 M0R2T5 61 aa11.57□□□□□ -0.56
TFAP2A-210ENST00000474952 SPATA8Q6RVD6 105 aa11.56□□□□□ -0.56
TFAP2A-210ENST00000474952 A8MU10 97 aa11.55□□□□□ -0.56
TFAP2A-210ENST00000474952 KRTAP13-4Q3LI77 160 aa11.47□□□□□ -0.57
TFAP2A-210ENST00000474952 PRO0628Q9UI54 55 aa11.4□□□□□ -0.58
TFAP2A-210ENST00000474952 LORP23490 312 aaPredicted RBP11.39□□□□□ -0.59
TFAP2A-210ENST00000474952 M0QZ58 72 aa11.38□□□□□ -0.59
TFAP2A-210ENST00000474952 R4GN34 69 aa11.32□□□□□ -0.6
TFAP2A-210ENST00000474952 KRTAP9-8Q9BYQ0 159 aa11.26□□□□□ -0.61
TFAP2A-210ENST00000474952 A0A0D9SG42 100 aa11.25□□□□□ -0.61
TFAP2A-210ENST00000474952 MT2AP02795 61 aa11.23□□□□□ -0.61
TFAP2A-210ENST00000474952 CRIPTQ9P021 101 aa11.23□□□□□ -0.61
TFAP2A-210ENST00000474952 LCE2AQ5TA79 106 aaPredicted RBP11.2□□□□□ -0.62
TFAP2A-210ENST00000474952 MT1FP04733 61 aa11.17□□□□□ -0.62
TFAP2A-210ENST00000474952 KRTAP10-10P60014 251 aa11.13□□□□□ -0.63
TFAP2A-210ENST00000474952 LINC01554Q52M75 96 aa11.13□□□□□ -0.63
TFAP2A-210ENST00000474952 KRTAP12-1P59990 96 aa11.03□□□□□ -0.64
TFAP2A-210ENST00000474952 K7ERS5 55 aa11.02□□□□□ -0.64
TFAP2A-210ENST00000474952 PMAIP1Q13794 54 aa11.02□□□□□ -0.64
TFAP2A-210ENST00000474952 KRTAP12-2P59991 146 aa11□□□□□ -0.65
TFAP2A-210ENST00000474952 SPRR2GQ9BYE4 73 aa11□□□□□ -0.65
TFAP2A-210ENST00000474952 SPINT4Q6UDR6 99 aa10.98□□□□□ -0.65
TFAP2A-210ENST00000474952 KRTAP19-1Q8IUB9 90 aa10.98□□□□□ -0.65
TFAP2A-210ENST00000474952 A6NN06 94 aa10.97□□□□□ -0.65
TFAP2A-210ENST00000474952 KRTAP9-3Q9BYQ3 159 aa10.85□□□□□ -0.67
TFAP2A-210ENST00000474952 KRTAP19-8Q3LI54 63 aa10.72□□□□□ -0.69
TFAP2A-210ENST00000474952 PLAC4Q8WY50 150 aa10.64□□□□□ -0.71
TFAP2A-210ENST00000474952 SVIPQ8NHG7 77 aa10.62□□□□□ -0.71
TFAP2A-210ENST00000474952 CAMK2N1Q7Z7J9 78 aa10.61□□□□□ -0.71
TFAP2A-210ENST00000474952 ROMO1P60602 79 aa10.6□□□□□ -0.71
TFAP2A-210ENST00000474952 MT1BP07438 61 aa10.58□□□□□ -0.72
TFAP2A-210ENST00000474952 KTN1-AS1Q86SY8 53 aa10.56□□□□□ -0.72
TFAP2A-210ENST00000474952 LCE2BO14633 110 aa10.55□□□□□ -0.72
TFAP2A-210ENST00000474952 C10orf95Q9H7T3 257 aa10.44□□□□□ -0.74
TFAP2A-210ENST00000474952 PRAC1Q96KF2 57 aa10.35□□□□□ -0.75
TFAP2A-210ENST00000474952 MT1XP80297 61 aa10.24□□□□□ -0.77
TFAP2A-210ENST00000474952 KRTAP10-5P60370 271 aa10.22□□□□□ -0.77
TFAP2A-210ENST00000474952 USH2AO75445 5202 aa10.21□□□□□ -0.78
TFAP2A-210ENST00000474952 LCE2DQ5TA82 110 aaPredicted RBP10.17□□□□□ -0.78
TFAP2A-210ENST00000474952 KRTAP25-1Q3LHN0 102 aa10.15□□□□□ -0.79
TFAP2A-210ENST00000474952 TNP1P09430 55 aa10.1□□□□□ -0.79
TFAP2A-210ENST00000474952 PRO2289Q9P1D8 64 aa10.1□□□□□ -0.79
TFAP2A-210ENST00000474952 SSPOA2VEC9 5147 aa9.91□□□□□ -0.82
TFAP2A-210ENST00000474952 KRTAP19-6Q3LI70 58 aa9.89□□□□□ -0.83
TFAP2A-210ENST00000474952 KRTAP10-7P60409 375 aaPredicted RBP9.83□□□□□ -0.84
TFAP2A-210ENST00000474952 PP632Q6XCG6 107 aa9.79□□□□□ -0.84
TFAP2A-210ENST00000474952 KRTAP23-1A1A580 65 aa9.78□□□□□ -0.84
TFAP2A-210ENST00000474952 KRTAP9-2Q9BYQ4 174 aa9.75□□□□□ -0.85
TFAP2A-210ENST00000474952 KRTAP10-12P60413 245 aa9.71□□□□□ -0.85
TFAP2A-210ENST00000474952 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
TFAP2A-210ENST00000474952 LCE3AQ5TA76 89 aa9.69□□□□□ -0.86
TFAP2A-210ENST00000474952 KRTAP8-1Q8IUC2 63 aa9.48□□□□□ -0.89
TFAP2A-210ENST00000474952 FCGBPQ9Y6R7 5405 aaPredicted RBP9.46□□□□□ -0.9
TFAP2A-210ENST00000474952 KRTAP4-8A0A0G2JLE6 195 aa9.44□□□□□ -0.9
TFAP2A-210ENST00000474952 KRTAP4-8Q9BYQ9 185 aa9.44□□□□□ -0.9
TFAP2A-210ENST00000474952 CRCT1Q9UGL9 99 aa9.42□□□□□ -0.9
TFAP2A-210ENST00000474952 KMT2DO14686 5537 aa9.32□□□□□ -0.92
TFAP2A-210ENST00000474952 KRTAP12-3P60328 96 aa9.29□□□□□ -0.92
TFAP2A-210ENST00000474952 KRTAP19-5Q3LI72 72 aa9.26□□□□□ -0.93
TFAP2A-210ENST00000474952 KRTAP19-7Q3SYF9 63 aa9.13□□□□□ -0.95
TFAP2A-210ENST00000474952 KRTAP15-1Q3LI76 137 aa9.11□□□□□ -0.95
TFAP2A-210ENST00000474952 KRTAP9-6A0A140TA67 174 aa8.97□□□□□ -0.97
TFAP2A-210ENST00000474952 MT1EP04732 61 aa8.97□□□□□ -0.97
TFAP2A-210ENST00000474952 MACF1Q9UPN3 7388 aaKnown RBP8.94□□□□□ -0.98
TFAP2A-210ENST00000474952 MT1LQ93083 61 aa8.8□□□□□ -1
TFAP2A-210ENST00000474952 SPRR2FQ96RM1 72 aa8.79□□□□□ -1
TFAP2A-210ENST00000474952 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.72□□□□□ -1.01
TFAP2A-210ENST00000474952 SPRR5A0A1B0GTR4 108 aa8.7□□□□□ -1.02
TFAP2A-210ENST00000474952 LCE3CQ5T5A8 94 aa8.69□□□□□ -1.02
TFAP2A-210ENST00000474952 KRTAP5-9P26371 169 aa8.68□□□□□ -1.02
TFAP2A-210ENST00000474952 KRTAP19-4Q3LI73 84 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms