RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
CNN3-205ENST00000474409 PCP4P48539 62 aa4.12□□□□□ -1.75
CNN3-205ENST00000474409 S4R3F8 94 aa4.12□□□□□ -1.75
CNN3-205ENST00000474409 M0R2T5 61 aa4.11□□□□□ -1.75
CNN3-205ENST00000474409 MT1HP80294 61 aa4.11□□□□□ -1.75
CNN3-205ENST00000474409 ACYP2P14621 99 aa4.1□□□□□ -1.75
CNN3-205ENST00000474409 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
CNN3-205ENST00000474409 TMEM258P61165 79 aa4.08□□□□□ -1.76
CNN3-205ENST00000474409 LCA10Q71F78 164 aa4.08□□□□□ -1.76
CNN3-205ENST00000474409 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
CNN3-205ENST00000474409 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
CNN3-205ENST00000474409 COA5Q86WW8 74 aa4.03□□□□□ -1.76
CNN3-205ENST00000474409 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
CNN3-205ENST00000474409 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
CNN3-205ENST00000474409 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
CNN3-205ENST00000474409 LORP23490 312 aaPredicted RBP3.95□□□□□ -1.78
CNN3-205ENST00000474409 SERP1Q9Y6X1 66 aa3.94□□□□□ -1.78
CNN3-205ENST00000474409 MT2AP02795 61 aa3.91□□□□□ -1.78
CNN3-205ENST00000474409 H0YAA0 97 aa3.9□□□□□ -1.79
CNN3-205ENST00000474409 LCE2BO14633 110 aa3.9□□□□□ -1.79
CNN3-205ENST00000474409 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.79
CNN3-205ENST00000474409 KRTAP9-8Q9BYQ0 159 aa3.9□□□□□ -1.79
CNN3-205ENST00000474409 MT1FP04733 61 aa3.88□□□□□ -1.79
CNN3-205ENST00000474409 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
CNN3-205ENST00000474409 SEC61GP60059 68 aa3.87□□□□□ -1.79
CNN3-205ENST00000474409 A0A1B0GU69 56 aa3.83□□□□□ -1.8
CNN3-205ENST00000474409 P0C880 135 aa3.83□□□□□ -1.8
CNN3-205ENST00000474409 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
CNN3-205ENST00000474409 RPS28P62857 69 aaKnown RBP3.81□□□□□ -1.8
CNN3-205ENST00000474409 CRIPTQ9P021 101 aa3.81□□□□□ -1.8
CNN3-205ENST00000474409 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
CNN3-205ENST00000474409 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
CNN3-205ENST00000474409 R4GN34 69 aa3.79□□□□□ -1.8
CNN3-205ENST00000474409 V9GYY9 64 aa3.79□□□□□ -1.8
CNN3-205ENST00000474409 M0QZ58 72 aa3.78□□□□□ -1.8
CNN3-205ENST00000474409 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
CNN3-205ENST00000474409 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
CNN3-205ENST00000474409 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
CNN3-205ENST00000474409 Q1T7F1 81 aa3.76□□□□□ -1.81
CNN3-205ENST00000474409 A0A1B0GU33 70 aa3.74□□□□□ -1.81
CNN3-205ENST00000474409 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
CNN3-205ENST00000474409 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
CNN3-205ENST00000474409 PSPHP1O15172 72 aa3.73□□□□□ -1.81
CNN3-205ENST00000474409 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
CNN3-205ENST00000474409 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
CNN3-205ENST00000474409 H3BS24 57 aa3.72□□□□□ -1.81
CNN3-205ENST00000474409 LINC01554Q52M75 96 aa3.72□□□□□ -1.81
CNN3-205ENST00000474409 KRTAP13-4Q3LI77 160 aa3.7□□□□□ -1.82
CNN3-205ENST00000474409 SPATA8Q6RVD6 105 aa3.69□□□□□ -1.82
CNN3-205ENST00000474409 Q5VV11 94 aa3.68□□□□□ -1.82
CNN3-205ENST00000474409 UQCR11O14957 56 aa3.67□□□□□ -1.82
CNN3-205ENST00000474409 KRTAP19-8Q3LI54 63 aa3.66□□□□□ -1.82
CNN3-205ENST00000474409 USH2AO75445 5202 aa3.66□□□□□ -1.82
CNN3-205ENST00000474409 A0A0D9SG42 100 aa3.65□□□□□ -1.83
CNN3-205ENST00000474409 A6NED7 52 aa3.63□□□□□ -1.83
CNN3-205ENST00000474409 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
CNN3-205ENST00000474409 MT1BP07438 61 aa3.62□□□□□ -1.83
CNN3-205ENST00000474409 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
CNN3-205ENST00000474409 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
CNN3-205ENST00000474409 A6NN06 94 aa3.61□□□□□ -1.83
CNN3-205ENST00000474409 A8MU10 97 aa3.61□□□□□ -1.83
CNN3-205ENST00000474409 LCE3BQ5TA77 95 aa3.59□□□□□ -1.83
CNN3-205ENST00000474409 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
CNN3-205ENST00000474409 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
CNN3-205ENST00000474409 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
CNN3-205ENST00000474409 KRTAP12-1P59990 96 aa3.55□□□□□ -1.84
CNN3-205ENST00000474409 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
CNN3-205ENST00000474409 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
CNN3-205ENST00000474409 CRCT1Q9UGL9 99 aa3.55□□□□□ -1.84
CNN3-205ENST00000474409 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
CNN3-205ENST00000474409 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
CNN3-205ENST00000474409 K7ERS5 55 aa3.52□□□□□ -1.85
CNN3-205ENST00000474409 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
CNN3-205ENST00000474409 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
CNN3-205ENST00000474409 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
CNN3-205ENST00000474409 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
CNN3-205ENST00000474409 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
CNN3-205ENST00000474409 MT1XP80297 61 aa3.47□□□□□ -1.85
CNN3-205ENST00000474409 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
CNN3-205ENST00000474409 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
CNN3-205ENST00000474409 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
CNN3-205ENST00000474409 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
CNN3-205ENST00000474409 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
CNN3-205ENST00000474409 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CNN3-205ENST00000474409 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
CNN3-205ENST00000474409 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
CNN3-205ENST00000474409 TNP1P09430 55 aa3.33□□□□□ -1.88
CNN3-205ENST00000474409 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
CNN3-205ENST00000474409 ROMO1P60602 79 aa3.31□□□□□ -1.88
CNN3-205ENST00000474409 KMT2DO14686 5537 aa3.3□□□□□ -1.88
CNN3-205ENST00000474409 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
CNN3-205ENST00000474409 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
CNN3-205ENST00000474409 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
CNN3-205ENST00000474409 KRTAP25-1Q3LHN0 102 aa3.27□□□□□ -1.89
CNN3-205ENST00000474409 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
CNN3-205ENST00000474409 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
CNN3-205ENST00000474409 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
CNN3-205ENST00000474409 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
CNN3-205ENST00000474409 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
CNN3-205ENST00000474409 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms